RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, humanhuman

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-206ENST00000482771 ARHGAP21Q5T5U3 1957 aa11.77□□□□□ -0.53
TMEM54-206ENST00000482771 CLCA1A8K7I4 914 aa11.76□□□□□ -0.53
TMEM54-206ENST00000482771 DYRK3O43781 588 aa11.76□□□□□ -0.53
TMEM54-206ENST00000482771 FGF17O60258 216 aa11.76□□□□□ -0.53
TMEM54-206ENST00000482771 IGKV3-11P04433 115 aa11.76□□□□□ -0.53
TMEM54-206ENST00000482771 CD53P19397 219 aa11.76□□□□□ -0.53
TMEM54-206ENST00000482771 CPN2P22792 545 aa11.76□□□□□ -0.53
TMEM54-206ENST00000482771 CTSSP25774 331 aa11.76□□□□□ -0.53
TMEM54-206ENST00000482771 GDF1P27539 372 aa11.76□□□□□ -0.53
TMEM54-206ENST00000482771 ELK3P41970 407 aa11.76□□□□□ -0.53
TMEM54-206ENST00000482771 STT3AP46977 705 aa11.76□□□□□ -0.53
TMEM54-206ENST00000482771 TAS2R39P59534 338 aa11.76□□□□□ -0.53
TMEM54-206ENST00000482771 DCAF7P61962 342 aa11.76□□□□□ -0.53
TMEM54-206ENST00000482771 POU4F3Q15319 338 aa11.76□□□□□ -0.53
TMEM54-206ENST00000482771 PCBP2Q15366 365 aaKnown RBP eCLIP11.76□□□□□ -0.53
TMEM54-206ENST00000482771 SF3B4Q15427 424 aaKnown RBP eCLIP11.76□□□□□ -0.53
TMEM54-206ENST00000482771 PPP1R7Q15435 360 aa11.76□□□□□ -0.53
TMEM54-206ENST00000482771 HIST2H2ACQ16777 129 aaPredicted RBP11.76□□□□□ -0.53
TMEM54-206ENST00000482771 AP5B1Q2VPB7 878 aa11.76□□□□□ -0.53
TMEM54-206ENST00000482771 FBXO48Q5FWF7 155 aa11.76□□□□□ -0.53
TMEM54-206ENST00000482771 HIST2H2AA3Q6FI13 130 aa11.76□□□□□ -0.53
TMEM54-206ENST00000482771 PRIMA1Q86XR5 153 aa11.76□□□□□ -0.53
TMEM54-206ENST00000482771 KRTAP1-3Q8IUG1 177 aa11.76□□□□□ -0.53
TMEM54-206ENST00000482771 LRRC8AQ8IWT6 810 aa11.76□□□□□ -0.53
TMEM54-206ENST00000482771 SNX31Q8N9S9 440 aa11.76□□□□□ -0.53
TMEM54-206ENST00000482771 SRFBP1Q8NEF9 429 aaKnown RBP11.76□□□□□ -0.53
TMEM54-206ENST00000482771 C7orf57Q8NEG2 295 aa11.76□□□□□ -0.53
TMEM54-206ENST00000482771 NUDT8Q8WV74 236 aa11.76□□□□□ -0.53
TMEM54-206ENST00000482771 PBKQ96KB5 322 aa11.76□□□□□ -0.53
TMEM54-206ENST00000482771 DOHHQ9BU89 302 aa11.76□□□□□ -0.53
TMEM54-206ENST00000482771 EHD1Q9H4M9 534 aa11.76□□□□□ -0.53
TMEM54-206ENST00000482771 DNAJC11Q9NVH1 559 aa11.76□□□□□ -0.53
TMEM54-206ENST00000482771 BEX4Q9NWD9 120 aaPredicted RBP11.76□□□□□ -0.53
TMEM54-206ENST00000482771 CNOT11Q9UKZ1 510 aaKnown RBP11.76□□□□□ -0.53
TMEM54-206ENST00000482771 CAMK2AQ9UQM7 478 aa11.76□□□□□ -0.53
TMEM54-206ENST00000482771 SLC6A5Q9Y345 797 aa11.76□□□□□ -0.53
TMEM54-206ENST00000482771 PSAT1Q9Y617 370 aa11.76□□□□□ -0.53
TMEM54-206ENST00000482771 HIVEP2P31629 2446 aa11.76□□□□□ -0.53
TMEM54-206ENST00000482771 IQANK1A0A1B0GTG1 560 aa11.75□□□□□ -0.53
TMEM54-206ENST00000482771 FAM95CA0A1B0GW59 222 aa11.75□□□□□ -0.53
TMEM54-206ENST00000482771 KIAA1324LA8MWY0 1029 aaPredicted RBP11.75□□□□□ -0.53
TMEM54-206ENST00000482771 EEF1E1-BLOC1S5C9J1V9 151 aa11.75□□□□□ -0.53
TMEM54-206ENST00000482771 EEF1E1O43324 174 aaKnown RBP11.75□□□□□ -0.53
TMEM54-206ENST00000482771 TRIM3O75382 744 aaPredicted RBP11.75□□□□□ -0.53
TMEM54-206ENST00000482771 TGFB1P01137 390 aa11.75□□□□□ -0.53
TMEM54-206ENST00000482771 HEXAP06865 529 aa11.75□□□□□ -0.53
TMEM54-206ENST00000482771 FBXO45P0C2W1 286 aa11.75□□□□□ -0.53
TMEM54-206ENST00000482771 CRYZQ08257 329 aaKnown RBP11.75□□□□□ -0.53
TMEM54-206ENST00000482771 BIKQ13323 160 aa11.75□□□□□ -0.53
TMEM54-206ENST00000482771 TGFBIQ15582 683 aa11.75□□□□□ -0.53
TMEM54-206ENST00000482771 SHEQ5VZ18 495 aa11.75□□□□□ -0.53
TMEM54-206ENST00000482771 NSUN5P2Q63ZY6 315 aa11.75□□□□□ -0.53
TMEM54-206ENST00000482771 VASNQ6EMK4 673 aa11.75□□□□□ -0.53
TMEM54-206ENST00000482771 TMEM64Q6YI46 380 aa11.75□□□□□ -0.53
TMEM54-206ENST00000482771 ADAMTSL2Q86TH1 951 aa11.75□□□□□ -0.53
TMEM54-206ENST00000482771 DND1Q8IYX4 353 aaKnown RBP11.75□□□□□ -0.53
TMEM54-206ENST00000482771 SPATA6LQ8N4H0 392 aa11.75□□□□□ -0.53
TMEM54-206ENST00000482771 GRK7Q8WTQ7 553 aa11.75□□□□□ -0.53
TMEM54-206ENST00000482771 DIO2Q92813 273 aa11.75□□□□□ -0.53
TMEM54-206ENST00000482771 HSPBAP1Q96EW2 488 aa11.75□□□□□ -0.53
TMEM54-206ENST00000482771 PTCD3Q96EY7 689 aaKnown RBP11.75□□□□□ -0.53
TMEM54-206ENST00000482771 GAL3ST4Q96RP7 486 aa11.75□□□□□ -0.53
TMEM54-206ENST00000482771 TRIB1Q96RU8 372 aa11.75□□□□□ -0.53
TMEM54-206ENST00000482771 KRT12Q99456 494 aa11.75□□□□□ -0.53
TMEM54-206ENST00000482771 RPF2Q9H7B2 306 aaKnown RBP11.75□□□□□ -0.53
TMEM54-206ENST00000482771 WWOXQ9NZC7 414 aa11.75□□□□□ -0.53
TMEM54-206ENST00000482771 NCKAP5O14513 1909 aa11.75□□□□□ -0.53
TMEM54-206ENST00000482771 ATRQ13535 2644 aa11.75□□□□□ -0.53
TMEM54-206ENST00000482771 MED12Q93074 2177 aa11.75□□□□□ -0.53
TMEM54-206ENST00000482771 KIAA1549Q9HCM3 1950 aa11.74□□□□□ -0.53
TMEM54-206ENST00000482771 FAM171A2A8MVW0 826 aa11.74□□□□□ -0.53
TMEM54-206ENST00000482771 SAP18O00422 153 aaKnown RBP11.74□□□□□ -0.53
TMEM54-206ENST00000482771 DNALI1O14645 258 aaPredicted RBP11.74□□□□□ -0.53
TMEM54-206ENST00000482771 ARHGEF9O43307 516 aa11.74□□□□□ -0.53
TMEM54-206ENST00000482771 STK16O75716 305 aa11.74□□□□□ -0.53
TMEM54-206ENST00000482771 HRGP04196 525 aa11.74□□□□□ -0.53
TMEM54-206ENST00000482771 CD22P20273 847 aa11.74□□□□□ -0.53
TMEM54-206ENST00000482771 HIST1H1TP22492 207 aaPredicted RBP11.74□□□□□ -0.53
TMEM54-206ENST00000482771 OPRM1P35372 400 aa11.74□□□□□ -0.53
TMEM54-206ENST00000482771 GGT5P36269 586 aa11.74□□□□□ -0.53
TMEM54-206ENST00000482771 RPL21P46778 160 aaKnown RBP11.74□□□□□ -0.53
TMEM54-206ENST00000482771 HSPA7P48741 367 aa11.74□□□□□ -0.53
TMEM54-206ENST00000482771 IGLV3-21P80748 117 aaPredicted RBP11.74□□□□□ -0.53
TMEM54-206ENST00000482771 SLAMF1Q13291 335 aa11.74□□□□□ -0.53
TMEM54-206ENST00000482771 LAPTM5Q13571 262 aa11.74□□□□□ -0.53
TMEM54-206ENST00000482771 ZNF267Q14586 743 aaPredicted RBP11.74□□□□□ -0.53
TMEM54-206ENST00000482771 TOMM20Q15388 145 aa11.74□□□□□ -0.53
TMEM54-206ENST00000482771 BICRALQ6AI39 1079 aa11.74□□□□□ -0.53
TMEM54-206ENST00000482771 SYDE1Q6ZW31 735 aaPredicted RBP11.74□□□□□ -0.53
TMEM54-206ENST00000482771 SLC29A4Q7RTT9 530 aa11.74□□□□□ -0.53
TMEM54-206ENST00000482771 ZC3HC1Q86WB0 502 aaKnown RBP11.74□□□□□ -0.53
TMEM54-206ENST00000482771 GPSM1Q86YR5 675 aa11.74□□□□□ -0.53
TMEM54-206ENST00000482771 PM20D2Q8IYS1 436 aa11.74□□□□□ -0.53
TMEM54-206ENST00000482771 PDIK1LQ8N165 341 aa11.74□□□□□ -0.53
TMEM54-206ENST00000482771 VWA5B2Q8N398 1253 aa11.74□□□□□ -0.53
TMEM54-206ENST00000482771 BBOF1Q8ND07 529 aa11.74□□□□□ -0.53
TMEM54-206ENST00000482771 ANP32BQ92688 251 aaKnown RBP11.74□□□□□ -0.53
TMEM54-206ENST00000482771 TANKQ92844 425 aa11.74□□□□□ -0.53
TMEM54-206ENST00000482771 WDR34Q96EX3 536 aa11.74□□□□□ -0.53
TMEM54-206ENST00000482771 FBXL20Q96IG2 436 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms