RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 PIGAP37287 484 aa17.15■□□□□ 0.34
CLK1-211ENST00000481641 MAGEA5P43359 124 aa17.15■□□□□ 0.34
CLK1-211ENST00000481641 HERVK_113P63132 956 aa17.15■□□□□ 0.34
CLK1-211ENST00000481641 ERVK-8P63133 956 aa17.15■□□□□ 0.34
CLK1-211ENST00000481641 ZNF267Q14586 743 aaPredicted RBP17.15■□□□□ 0.34
CLK1-211ENST00000481641 FAM219BQ5XKK7 198 aa17.15■□□□□ 0.34
CLK1-211ENST00000481641 MRM1Q6IN84 353 aaKnown RBP17.15■□□□□ 0.34
CLK1-211ENST00000481641 KLC3Q6P597 504 aa17.15■□□□□ 0.34
CLK1-211ENST00000481641 OPN5Q6U736 354 aa17.15■□□□□ 0.34
CLK1-211ENST00000481641 FAM47EQ6ZV65 393 aa17.15■□□□□ 0.34
CLK1-211ENST00000481641 EID3Q8N140 333 aa17.15■□□□□ 0.34
CLK1-211ENST00000481641 TMEM251Q8N6I4 163 aa17.15■□□□□ 0.34
CLK1-211ENST00000481641 L3MBTL4Q8NA19 623 aa17.15■□□□□ 0.34
CLK1-211ENST00000481641 OR52B6Q8NGF0 335 aa17.15■□□□□ 0.34
CLK1-211ENST00000481641 OR5M9Q8NGP3 310 aa17.15■□□□□ 0.34
CLK1-211ENST00000481641 WDR20Q8TBZ3 569 aa17.15■□□□□ 0.34
CLK1-211ENST00000481641 FAM173AQ9BQD7 235 aa17.15■□□□□ 0.34
CLK1-211ENST00000481641 ERVK-6Q9BXR3 956 aa17.15■□□□□ 0.34
CLK1-211ENST00000481641 CDC42EP4Q9H3Q1 356 aaKnown RBP17.15■□□□□ 0.34
CLK1-211ENST00000481641 NOL11Q9H8H0 719 aaKnown RBP17.15■□□□□ 0.34
CLK1-211ENST00000481641 SACM1LQ9NTJ5 587 aa17.15■□□□□ 0.34
CLK1-211ENST00000481641 TUBA8Q9NY65 449 aaPredicted RBP17.15■□□□□ 0.34
CLK1-211ENST00000481641 TNFRSF10DQ9UBN6 386 aa17.15■□□□□ 0.34
CLK1-211ENST00000481641 ERVK-19Q9WJR5 959 aa17.15■□□□□ 0.34
CLK1-211ENST00000481641 TACC2O95359 2948 aa17.15■□□□□ 0.34
CLK1-211ENST00000481641 A0A1W2PS29 197 aa17.14■□□□□ 0.33
CLK1-211ENST00000481641 ACOT7O00154 380 aa17.14■□□□□ 0.33
CLK1-211ENST00000481641 CELA3AP09093 270 aa17.14■□□□□ 0.33
CLK1-211ENST00000481641 FAM58BPP0C7Q3 252 aa17.14■□□□□ 0.33
CLK1-211ENST00000481641 ARL1P40616 181 aaPredicted RBP17.14■□□□□ 0.33
CLK1-211ENST00000481641 BUD31P41223 144 aaPredicted RBP17.14■□□□□ 0.33
CLK1-211ENST00000481641 PHEXP78562 749 aa17.14■□□□□ 0.33
CLK1-211ENST00000481641 PLIN5Q00G26 463 aa17.14■□□□□ 0.33
CLK1-211ENST00000481641 FOXO1Q12778 655 aa17.14■□□□□ 0.33
CLK1-211ENST00000481641 MPEG1Q2M385 716 aa17.14■□□□□ 0.33
CLK1-211ENST00000481641 GXYLT1Q4G148 440 aa17.14■□□□□ 0.33
CLK1-211ENST00000481641 CYP20A1Q6UW02 462 aa17.14■□□□□ 0.33
CLK1-211ENST00000481641 LYPD8Q6UX82 237 aa17.14■□□□□ 0.33
CLK1-211ENST00000481641 GK5Q6ZS86 529 aa17.14■□□□□ 0.33
CLK1-211ENST00000481641 RPS27LQ71UM5 84 aaKnown RBP17.14■□□□□ 0.33
CLK1-211ENST00000481641 SLC22A16Q86VW1 577 aa17.14■□□□□ 0.33
CLK1-211ENST00000481641 GOLM1Q8NBJ4 401 aa17.14■□□□□ 0.33
CLK1-211ENST00000481641 NOA1Q8NC60 698 aaKnown RBP17.14■□□□□ 0.33
CLK1-211ENST00000481641 UHMK1Q8TAS1 419 aaKnown RBP17.14■□□□□ 0.33
CLK1-211ENST00000481641 SLC44A1Q8WWI5 657 aa17.14■□□□□ 0.33
CLK1-211ENST00000481641 IFT81Q8WYA0 676 aa17.14■□□□□ 0.33
CLK1-211ENST00000481641 REPS1Q96D71 796 aa17.14■□□□□ 0.33
CLK1-211ENST00000481641 SGCZQ96LD1 299 aa17.14■□□□□ 0.33
CLK1-211ENST00000481641 LURAP1Q96LR2 239 aa17.14■□□□□ 0.33
CLK1-211ENST00000481641 NSUN5Q96P11 429 aaKnown RBP17.14■□□□□ 0.33
CLK1-211ENST00000481641 TP63Q9H3D4 680 aaPredicted RBP17.14■□□□□ 0.33
CLK1-211ENST00000481641 DDX31Q9H8H2 851 aaKnown RBP17.14■□□□□ 0.33
CLK1-211ENST00000481641 PNPLA3Q9NST1 481 aa17.14■□□□□ 0.33
CLK1-211ENST00000481641 COQ3Q9NZJ6 369 aa17.14■□□□□ 0.33
CLK1-211ENST00000481641 RNF6Q9Y252 685 aa17.14■□□□□ 0.33
CLK1-211ENST00000481641 TNPO3Q9Y5L0 923 aaKnown RBP17.14■□□□□ 0.33
CLK1-211ENST00000481641 OTOGQ6ZRI0 2925 aa17.14■□□□□ 0.33
CLK1-211ENST00000481641 POLQO75417 2590 aa17.14■□□□□ 0.33
CLK1-211ENST00000481641 NINQ8N4C6 2090 aa17.13■□□□□ 0.33
CLK1-211ENST00000481641 ATP6AP2A0A1C7CYW4 349 aa17.13■□□□□ 0.33
CLK1-211ENST00000481641 CCDC189A1A4V9 331 aa17.13■□□□□ 0.33
CLK1-211ENST00000481641 PGRMC2O15173 223 aa17.13■□□□□ 0.33
CLK1-211ENST00000481641 UGDHO60701 494 aa17.13■□□□□ 0.33
CLK1-211ENST00000481641 ATP6AP2O75787 350 aa17.13■□□□□ 0.33
CLK1-211ENST00000481641 CLDN9O95484 217 aa17.13■□□□□ 0.33
CLK1-211ENST00000481641 GPR75O95800 540 aa17.13■□□□□ 0.33
CLK1-211ENST00000481641 AIFM1O95831 613 aa17.13■□□□□ 0.33
CLK1-211ENST00000481641 P04436 131 aa17.13■□□□□ 0.33
CLK1-211ENST00000481641 CUL3Q13618 768 aa17.13■□□□□ 0.33
CLK1-211ENST00000481641 ZNF791Q3KP31 576 aaPredicted RBP17.13■□□□□ 0.33
CLK1-211ENST00000481641 PAOXQ6QHF9 649 aa17.13■□□□□ 0.33
CLK1-211ENST00000481641 ADGRD1Q6QNK2 874 aa17.13■□□□□ 0.33
CLK1-211ENST00000481641 CCDC71Q8IV32 467 aaPredicted RBP17.13■□□□□ 0.33
CLK1-211ENST00000481641 ST13P4Q8IZP2 240 aaPredicted RBP17.13■□□□□ 0.33
CLK1-211ENST00000481641 NUBPLQ8TB37 319 aa17.13■□□□□ 0.33
CLK1-211ENST00000481641 ATP6V1E2Q96A05 226 aa17.13■□□□□ 0.33
CLK1-211ENST00000481641 FBXL20Q96IG2 436 aa17.13■□□□□ 0.33
CLK1-211ENST00000481641 GAL3ST4Q96RP7 486 aa17.13■□□□□ 0.33
CLK1-211ENST00000481641 UCK2Q9BZX2 261 aa17.13■□□□□ 0.33
CLK1-211ENST00000481641 IL1RL2Q9HB29 575 aa17.13■□□□□ 0.33
CLK1-211ENST00000481641 ZBTB26Q9HCK0 441 aa17.13■□□□□ 0.33
CLK1-211ENST00000481641 LYARQ9NX58 379 aaKnown RBP17.13■□□□□ 0.33
CLK1-211ENST00000481641 MTRF1LQ9UGC7 380 aaKnown RBP17.13■□□□□ 0.33
CLK1-211ENST00000481641 NCKAP5O14513 1909 aa17.12■□□□□ 0.33
CLK1-211ENST00000481641 IQANK1A0A1B0GTG1 560 aa17.12■□□□□ 0.33
CLK1-211ENST00000481641 NKX2-6A6NCS4 301 aa17.12■□□□□ 0.33
CLK1-211ENST00000481641 FAM90A27PA6NNH2 459 aa17.12■□□□□ 0.33
CLK1-211ENST00000481641 DYRK3O43781 588 aa17.12■□□□□ 0.33
CLK1-211ENST00000481641 OR10H2O60403 315 aa17.12■□□□□ 0.33
CLK1-211ENST00000481641 LRATO95237 230 aa17.12■□□□□ 0.33
CLK1-211ENST00000481641 CLPSP04118 112 aa17.12■□□□□ 0.33
CLK1-211ENST00000481641 INHBAP08476 426 aa17.12■□□□□ 0.33
CLK1-211ENST00000481641 NR2F6P10588 404 aa17.12■□□□□ 0.33
CLK1-211ENST00000481641 MAGEA12P43365 314 aa17.12■□□□□ 0.33
CLK1-211ENST00000481641 CCNG1P51959 295 aa17.12■□□□□ 0.33
CLK1-211ENST00000481641 ARFIP1P53367 373 aa17.12■□□□□ 0.33
CLK1-211ENST00000481641 NUP107P57740 925 aa17.12■□□□□ 0.33
CLK1-211ENST00000481641 KRTAP10-9P60411 292 aa17.12■□□□□ 0.33
CLK1-211ENST00000481641 PMPCAQ10713 525 aa17.12■□□□□ 0.33
CLK1-211ENST00000481641 WHAMMP3Q1A5X7 153 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms