RNA–Protein interactions for RNA: ENST00000480961.1

CTSA-206, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 513 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-206ENST00000480961 SIRT5Q9NXA8 310 aa19■□□□□ 0.63
CTSA-206ENST00000480961 PLA2G3Q9NZ20 509 aa19■□□□□ 0.63
CTSA-206ENST00000480961 EPB41L3Q9Y2J2 1087 aaPredicted RBP19■□□□□ 0.63
CTSA-206ENST00000480961 ZNF451Q9Y4E5 1061 aa19■□□□□ 0.63
CTSA-206ENST00000480961 NUP210LQ5VU65 1888 aa18.99■□□□□ 0.63
CTSA-206ENST00000480961 TRBV11-1A0A0K0K1C0 115 aa18.99■□□□□ 0.63
CTSA-206ENST00000480961 C1orf226A1L170 272 aa18.99■□□□□ 0.63
CTSA-206ENST00000480961 HRKO00198 91 aa18.99■□□□□ 0.63
CTSA-206ENST00000480961 OR10H2O60403 315 aa18.99■□□□□ 0.63
CTSA-206ENST00000480961 MAN1A2O60476 641 aa18.99■□□□□ 0.63
CTSA-206ENST00000480961 SNNO75324 88 aaPredicted RBP18.99■□□□□ 0.63
CTSA-206ENST00000480961 F10P00742 488 aa18.99■□□□□ 0.63
CTSA-206ENST00000480961 ALPPP05187 535 aa18.99■□□□□ 0.63
CTSA-206ENST00000480961 PRPH2P23942 346 aa18.99■□□□□ 0.63
CTSA-206ENST00000480961 PIK3R1P27986 724 aa18.99■□□□□ 0.63
CTSA-206ENST00000480961 FEN1P39748 380 aaKnown RBP18.99■□□□□ 0.63
CTSA-206ENST00000480961 CD97P48960 835 aa18.99■□□□□ 0.63
CTSA-206ENST00000480961 C2orf80Q0P641 193 aa18.99■□□□□ 0.63
CTSA-206ENST00000480961 XKR7Q5GH72 579 aa18.99■□□□□ 0.63
CTSA-206ENST00000480961 ATG16L1Q676U5 607 aa18.99■□□□□ 0.63
CTSA-206ENST00000480961 JMJD6Q6NYC1 403 aaPredicted RBP18.99■□□□□ 0.63
CTSA-206ENST00000480961 B3GNT7Q8NFL0 401 aa18.99■□□□□ 0.63
CTSA-206ENST00000480961 ELP5Q8TE02 316 aa18.99■□□□□ 0.63
CTSA-206ENST00000480961 THAP3Q8WTV1 239 aaPredicted RBP18.99■□□□□ 0.63
CTSA-206ENST00000480961 NCLNQ969V3 563 aa18.99■□□□□ 0.63
CTSA-206ENST00000480961 C19orf60Q96EN9 201 aa18.99■□□□□ 0.63
CTSA-206ENST00000480961 RBM18Q96H35 190 aaKnown RBP18.99■□□□□ 0.63
CTSA-206ENST00000480961 EGLN2Q96KS0 407 aa18.99■□□□□ 0.63
CTSA-206ENST00000480961 OR8D2Q9GZM6 311 aa18.99■□□□□ 0.63
CTSA-206ENST00000480961 THAP1Q9NVV9 213 aa18.99■□□□□ 0.63
CTSA-206ENST00000480961 MARCOQ9UEW3 520 aaPredicted RBP18.99■□□□□ 0.63
CTSA-206ENST00000480961 BAIAP2L1Q9UHR4 511 aa18.99■□□□□ 0.63
CTSA-206ENST00000480961 C1QL1O75973 258 aa18.98■□□□□ 0.63
CTSA-206ENST00000480961 DDAH2O95865 285 aa18.98■□□□□ 0.63
CTSA-206ENST00000480961 KITP10721 976 aa18.98■□□□□ 0.63
CTSA-206ENST00000480961 SOX11P35716 441 aa18.98■□□□□ 0.63
CTSA-206ENST00000480961 ZNF763Q0D2J5 394 aa18.98■□□□□ 0.63
CTSA-206ENST00000480961 PRSS53Q2L4Q9 553 aa18.98■□□□□ 0.63
CTSA-206ENST00000480961 ISLR2Q6UXK2 745 aa18.98■□□□□ 0.63
CTSA-206ENST00000480961 CRLF3Q8IUI8 442 aa18.98■□□□□ 0.63
CTSA-206ENST00000480961 TRIM42Q8IWZ5 723 aa18.98■□□□□ 0.63
CTSA-206ENST00000480961 APCDD1LQ8NCL9 501 aa18.98■□□□□ 0.63
CTSA-206ENST00000480961 OR14A16Q8NHC5 309 aa18.98■□□□□ 0.63
CTSA-206ENST00000480961 CLHC1Q8NHS4 586 aa18.98■□□□□ 0.63
CTSA-206ENST00000480961 FAM76AQ8TAV0 307 aa18.98■□□□□ 0.63
CTSA-206ENST00000480961 DAZLQ92904 295 aaKnown RBP18.98■□□□□ 0.63
CTSA-206ENST00000480961 GFM2Q969S9 779 aaKnown RBP18.98■□□□□ 0.63
CTSA-206ENST00000480961 EXOSC8Q96B26 276 aaKnown RBP18.98■□□□□ 0.63
CTSA-206ENST00000480961 KLHL29Q96CT2 875 aa18.98■□□□□ 0.63
CTSA-206ENST00000480961 TUBGCP3Q96CW5 907 aa18.98■□□□□ 0.63
CTSA-206ENST00000480961 NPAS2Q99743 824 aa18.98■□□□□ 0.63
CTSA-206ENST00000480961 HAO1Q9UJM8 370 aa18.98■□□□□ 0.63
CTSA-206ENST00000480961 ZNF223Q9UK11 482 aaPredicted RBP18.98■□□□□ 0.63
CTSA-206ENST00000480961 CSAG2Q9Y5P2 127 aa18.98■□□□□ 0.63
CTSA-206ENST00000480961 NPIPB8E9PQR5 432 aa18.97■□□□□ 0.63
CTSA-206ENST00000480961 SLC35E2P0CK97 266 aa18.97■□□□□ 0.63
CTSA-206ENST00000480961 COX7A2P14406 83 aa18.97■□□□□ 0.63
CTSA-206ENST00000480961 GPR143P51810 404 aa18.97■□□□□ 0.63
CTSA-206ENST00000480961 HK2P52789 917 aa18.97■□□□□ 0.63
CTSA-206ENST00000480961 PLIN5Q00G26 463 aa18.97■□□□□ 0.63
CTSA-206ENST00000480961 DUSP2Q05923 314 aa18.97■□□□□ 0.63
CTSA-206ENST00000480961 ZNF267Q14586 743 aaPredicted RBP18.97■□□□□ 0.63
CTSA-206ENST00000480961 TERF2Q15554 542 aa18.97■□□□□ 0.63
CTSA-206ENST00000480961 NADK2Q4G0N4 442 aa18.97■□□□□ 0.63
CTSA-206ENST00000480961 CRB2Q5IJ48 1285 aa18.97■□□□□ 0.63
CTSA-206ENST00000480961 FAM71E1Q6IPT2 247 aa18.97■□□□□ 0.63
CTSA-206ENST00000480961 ST13P4Q8IZP2 240 aaPredicted RBP18.97■□□□□ 0.63
CTSA-206ENST00000480961 ZNF843Q8N446 348 aa18.97■□□□□ 0.63
CTSA-206ENST00000480961 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.97■□□□□ 0.63
CTSA-206ENST00000480961 RAB3IL1Q8TBN0 382 aa18.97■□□□□ 0.63
CTSA-206ENST00000480961 SLC2A12Q8TD20 617 aa18.97■□□□□ 0.63
CTSA-206ENST00000480961 DYDC1Q8WWB3 177 aa18.97■□□□□ 0.63
CTSA-206ENST00000480961 RIT1Q92963 219 aa18.97■□□□□ 0.63
CTSA-206ENST00000480961 SENP5Q96HI0 755 aaPredicted RBP18.97■□□□□ 0.63
CTSA-206ENST00000480961 PPP3R2Q96LZ3 170 aa18.97■□□□□ 0.63
CTSA-206ENST00000480961 TSSK3Q96PN8 268 aa18.97■□□□□ 0.63
CTSA-206ENST00000480961 C1orf50Q9BV19 199 aa18.97■□□□□ 0.63
CTSA-206ENST00000480961 CNPPD1Q9BV87 410 aa18.97■□□□□ 0.63
CTSA-206ENST00000480961 DEFB126Q9BYW3 111 aa18.97■□□□□ 0.63
CTSA-206ENST00000480961 NUF2Q9BZD4 464 aa18.97■□□□□ 0.63
CTSA-206ENST00000480961 CDCP1Q9H5V8 836 aa18.97■□□□□ 0.63
CTSA-206ENST00000480961 LIN28AQ9H9Z2 209 aaKnown RBP18.97■□□□□ 0.63
CTSA-206ENST00000480961 STMN3Q9NZ72 180 aa18.97■□□□□ 0.63
CTSA-206ENST00000480961 LUZP4Q9P127 313 aa18.97■□□□□ 0.63
CTSA-206ENST00000480961 UTS2RQ9UKP6 389 aa18.97■□□□□ 0.63
CTSA-206ENST00000480961 EXO1Q9UQ84 846 aaKnown RBP18.97■□□□□ 0.63
CTSA-206ENST00000480961 SPTA1P02549 2419 aa18.96■□□□□ 0.63
CTSA-206ENST00000480961 AKAP10O43572 662 aa18.96■□□□□ 0.63
CTSA-206ENST00000480961 PRKNO60260 465 aaPredicted RBP18.96■□□□□ 0.63
CTSA-206ENST00000480961 KLHL41O60662 606 aa18.96■□□□□ 0.63
CTSA-206ENST00000480961 SNUPNO95149 360 aaKnown RBP18.96■□□□□ 0.63
CTSA-206ENST00000480961 LRATO95237 230 aa18.96■□□□□ 0.63
CTSA-206ENST00000480961 BCKDHAP12694 445 aa18.96■□□□□ 0.63
CTSA-206ENST00000480961 CPMP14384 443 aa18.96■□□□□ 0.63
CTSA-206ENST00000480961 DRD2P14416 443 aa18.96■□□□□ 0.63
CTSA-206ENST00000480961 SDC1P18827 310 aa18.96■□□□□ 0.63
CTSA-206ENST00000480961 AP2B1P63010 937 aa18.96■□□□□ 0.63
CTSA-206ENST00000480961 OCRLQ01968 901 aa18.96■□□□□ 0.63
CTSA-206ENST00000480961 MFAP5Q13361 173 aa18.96■□□□□ 0.63
CTSA-206ENST00000480961 HEPACAMQ14CZ8 416 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms