RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 ITGB7P26010 798 aa12.66□□□□□ -0.38
PDZRN3-208ENST00000479530 CDK6Q00534 326 aa12.66□□□□□ -0.38
PDZRN3-208ENST00000479530 EEF1A2Q05639 463 aaKnown RBP12.66□□□□□ -0.38
PDZRN3-208ENST00000479530 GRIN2CQ14957 1233 aa12.66□□□□□ -0.38
PDZRN3-208ENST00000479530 TATDN3Q17R31 274 aa12.66□□□□□ -0.38
PDZRN3-208ENST00000479530 PYDC2Q56P42 97 aa12.66□□□□□ -0.38
PDZRN3-208ENST00000479530 CDKL4Q5MAI5 379 aa12.66□□□□□ -0.38
PDZRN3-208ENST00000479530 PDZK1Q5T2W1 519 aa12.66□□□□□ -0.38
PDZRN3-208ENST00000479530 CNKSR3Q6P9H4 555 aa12.66□□□□□ -0.38
PDZRN3-208ENST00000479530 AGTRAPQ6RW13 159 aa12.66□□□□□ -0.38
PDZRN3-208ENST00000479530 ANKRD33Q7Z3H0 272 aa12.66□□□□□ -0.38
PDZRN3-208ENST00000479530 ELMOD2Q8IZ81 293 aa12.66□□□□□ -0.38
PDZRN3-208ENST00000479530 ATP6V1C2Q8NEY4 427 aa12.66□□□□□ -0.38
PDZRN3-208ENST00000479530 SUN5Q8TC36 379 aa12.66□□□□□ -0.38
PDZRN3-208ENST00000479530 MAPKAP1Q9BPZ7 522 aa12.66□□□□□ -0.38
PDZRN3-208ENST00000479530 SGK2Q9HBY8 427 aa12.66□□□□□ -0.38
PDZRN3-208ENST00000479530 FZD3Q9NPG1 666 aa12.66□□□□□ -0.38
PDZRN3-208ENST00000479530 GULP1Q9UBP9 304 aa12.66□□□□□ -0.38
PDZRN3-208ENST00000479530 REV1Q9UBZ9 1251 aa12.66□□□□□ -0.38
PDZRN3-208ENST00000479530 ZNF106Q9H2Y7 1883 aaKnown RBP12.66□□□□□ -0.38
PDZRN3-208ENST00000479530 SERTM1A2A2V5 107 aa12.66□□□□□ -0.38
PDZRN3-208ENST00000479530 HIDE1A8MVS5 230 aa12.66□□□□□ -0.38
PDZRN3-208ENST00000479530 GRM6O15303 877 aa12.66□□□□□ -0.38
PDZRN3-208ENST00000479530 CXCL14O95715 111 aa12.66□□□□□ -0.38
PDZRN3-208ENST00000479530 TSPAN19P0C672 248 aa12.66□□□□□ -0.38
PDZRN3-208ENST00000479530 APEX1P27695 318 aaKnown RBP12.66□□□□□ -0.38
PDZRN3-208ENST00000479530 SDC2P34741 201 aa12.66□□□□□ -0.38
PDZRN3-208ENST00000479530 MLLT3P42568 568 aaPredicted RBP12.66□□□□□ -0.38
PDZRN3-208ENST00000479530 HMGA2P52926 109 aa12.66□□□□□ -0.38
PDZRN3-208ENST00000479530 C21orf58P58505 322 aa12.66□□□□□ -0.38
PDZRN3-208ENST00000479530 ZNF91Q05481 1191 aa12.66□□□□□ -0.38
PDZRN3-208ENST00000479530 LILRA6Q6PI73 481 aa12.66□□□□□ -0.38
PDZRN3-208ENST00000479530 RASSF5Q8WWW0 418 aa12.66□□□□□ -0.38
PDZRN3-208ENST00000479530 TMEM80Q96HE8 168 aa12.66□□□□□ -0.38
PDZRN3-208ENST00000479530 MED30Q96HR3 178 aa12.66□□□□□ -0.38
PDZRN3-208ENST00000479530 ZSWIM3Q96MP5 696 aa12.66□□□□□ -0.38
PDZRN3-208ENST00000479530 STOX2Q9P2F5 926 aaPredicted RBP12.66□□□□□ -0.38
PDZRN3-208ENST00000479530 ZNF282Q9UDV7 671 aaPredicted RBP12.66□□□□□ -0.38
PDZRN3-208ENST00000479530 SLC25A13Q9UJS0 675 aa12.66□□□□□ -0.38
PDZRN3-208ENST00000479530 CORO2BQ9UQ03 480 aa12.66□□□□□ -0.38
PDZRN3-208ENST00000479530 WNT6Q9Y6F9 365 aa12.66□□□□□ -0.38
PDZRN3-208ENST00000479530 CLCA3PQ9Y6N3 262 aa12.66□□□□□ -0.38
PDZRN3-208ENST00000479530 A0A0C4DFX4 3053 aa12.66□□□□□ -0.38
PDZRN3-208ENST00000479530 ANTXRLA6NF34 631 aa12.65□□□□□ -0.38
PDZRN3-208ENST00000479530 C12orf71A8MTZ7 269 aa12.65□□□□□ -0.38
PDZRN3-208ENST00000479530 MPC1LP0DKB6 136 aa12.65□□□□□ -0.38
PDZRN3-208ENST00000479530 PIPP12273 146 aaPredicted RBP12.65□□□□□ -0.38
PDZRN3-208ENST00000479530 ZNF8P17098 575 aaPredicted RBP12.65□□□□□ -0.38
PDZRN3-208ENST00000479530 PTX3P26022 381 aaPredicted RBP12.65□□□□□ -0.38
PDZRN3-208ENST00000479530 PTPN5P54829 565 aa12.65□□□□□ -0.38
PDZRN3-208ENST00000479530 MEF2AQ02078 507 aaPredicted RBP12.65□□□□□ -0.38
PDZRN3-208ENST00000479530 RPS26P11Q5JNZ5 115 aaPredicted RBP12.65□□□□□ -0.38
PDZRN3-208ENST00000479530 PLEKHS1Q5SXH7 462 aa12.65□□□□□ -0.38
PDZRN3-208ENST00000479530 CEACAM20Q6UY09 585 aa12.65□□□□□ -0.38
PDZRN3-208ENST00000479530 TAGAPQ8N103 731 aa12.65□□□□□ -0.38
PDZRN3-208ENST00000479530 IQCF1Q8N6M8 205 aa12.65□□□□□ -0.38
PDZRN3-208ENST00000479530 NANOGP1Q8N7R0 232 aa12.65□□□□□ -0.38
PDZRN3-208ENST00000479530 KREMEN2Q8NCW0 462 aa12.65□□□□□ -0.38
PDZRN3-208ENST00000479530 HUS1BQ8NHY5 278 aa12.65□□□□□ -0.38
PDZRN3-208ENST00000479530 ZFAND1Q8TCF1 268 aa12.65□□□□□ -0.38
PDZRN3-208ENST00000479530 BTN2A2Q8WVV5 523 aa12.65□□□□□ -0.38
PDZRN3-208ENST00000479530 GEMIN6Q8WXD5 167 aaKnown RBP12.65□□□□□ -0.38
PDZRN3-208ENST00000479530 KLHL6Q8WZ60 621 aa12.65□□□□□ -0.38
PDZRN3-208ENST00000479530 WFDC6Q9BQY6 131 aa12.65□□□□□ -0.38
PDZRN3-208ENST00000479530 DSPPQ9NZW4 1301 aa12.65□□□□□ -0.38
PDZRN3-208ENST00000479530 KLHL42Q9P2K6 505 aa12.65□□□□□ -0.38
PDZRN3-208ENST00000479530 SSR3Q9UNL2 185 aa12.65□□□□□ -0.38
PDZRN3-208ENST00000479530 ENPP4Q9Y6X5 453 aa12.65□□□□□ -0.38
PDZRN3-208ENST00000479530 HEPACAM2A8MVW5 462 aa12.65□□□□□ -0.38
PDZRN3-208ENST00000479530 NPC1O15118 1278 aa12.65□□□□□ -0.38
PDZRN3-208ENST00000479530 MOSPD3O75425 235 aa12.65□□□□□ -0.38
PDZRN3-208ENST00000479530 TPPPO94811 219 aa12.65□□□□□ -0.38
PDZRN3-208ENST00000479530 SLCO2B1O94956 709 aa12.65□□□□□ -0.38
PDZRN3-208ENST00000479530 PSKH1P11801 424 aa12.65□□□□□ -0.38
PDZRN3-208ENST00000479530 ALAS2P22557 587 aa12.65□□□□□ -0.38
PDZRN3-208ENST00000479530 PPIBP23284 216 aaKnown RBP12.65□□□□□ -0.38
PDZRN3-208ENST00000479530 MAN2A2P49641 1150 aa12.65□□□□□ -0.38
PDZRN3-208ENST00000479530 RPS13P62277 151 aaKnown RBP12.65□□□□□ -0.38
PDZRN3-208ENST00000479530 NFE2L1Q14494 772 aa12.65□□□□□ -0.38
PDZRN3-208ENST00000479530 LIPJQ5W064 366 aa12.65□□□□□ -0.38
PDZRN3-208ENST00000479530 XKRXQ6PP77 449 aa12.65□□□□□ -0.38
PDZRN3-208ENST00000479530 MMP21Q8N119 569 aa12.65□□□□□ -0.38
PDZRN3-208ENST00000479530 TCEANCQ8N8B7 351 aa12.65□□□□□ -0.38
PDZRN3-208ENST00000479530 DEDD2Q8WXF8 326 aa12.65□□□□□ -0.38
PDZRN3-208ENST00000479530 TRIM63Q969Q1 353 aa12.65□□□□□ -0.38
PDZRN3-208ENST00000479530 MSLNLQ96KJ4 702 aa12.65□□□□□ -0.38
PDZRN3-208ENST00000479530 C19orf43Q9BQ61 176 aa12.65□□□□□ -0.38
PDZRN3-208ENST00000479530 WRAP53Q9BUR4 548 aaKnown RBP12.65□□□□□ -0.38
PDZRN3-208ENST00000479530 MCOLN1Q9GZU1 580 aa12.65□□□□□ -0.38
PDZRN3-208ENST00000479530 PAK6Q9NQU5 681 aaPredicted RBP12.65□□□□□ -0.38
PDZRN3-208ENST00000479530 ALG5Q9Y673 324 aa12.65□□□□□ -0.38
PDZRN3-208ENST00000479530 A8MVJ9 347 aa12.64□□□□□ -0.39
PDZRN3-208ENST00000479530 H3BN98 237 aa12.64□□□□□ -0.39
PDZRN3-208ENST00000479530 K7ESM1 405 aa12.64□□□□□ -0.39
PDZRN3-208ENST00000479530 RNASET2O00584 256 aaKnown RBP12.64□□□□□ -0.39
PDZRN3-208ENST00000479530 KPNA5O15131 536 aa12.64□□□□□ -0.39
PDZRN3-208ENST00000479530 POLR1CO15160 346 aaPredicted RBP12.64□□□□□ -0.39
PDZRN3-208ENST00000479530 IMPA1P29218 277 aa12.64□□□□□ -0.39
PDZRN3-208ENST00000479530 OR3A3P47888 321 aa12.64□□□□□ -0.39
PDZRN3-208ENST00000479530 GZMKP49863 264 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms