RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 SERPINB3P29508 390 aa6.63□□□□□ -1.35
SPTLC1-205ENST00000477888 KIR2DL2P43627 348 aaPredicted RBP6.63□□□□□ -1.35
SPTLC1-205ENST00000477888 RPL21P46778 160 aaKnown RBP6.63□□□□□ -1.35
SPTLC1-205ENST00000477888 COMPP49747 757 aaPredicted RBP6.63□□□□□ -1.35
SPTLC1-205ENST00000477888 GDF10P55107 478 aa6.63□□□□□ -1.35
SPTLC1-205ENST00000477888 RAB38P57729 211 aa6.63□□□□□ -1.35
SPTLC1-205ENST00000477888 COPS2P61201 443 aa6.63□□□□□ -1.35
SPTLC1-205ENST00000477888 FUT7Q11130 342 aa6.63□□□□□ -1.35
SPTLC1-205ENST00000477888 NAE1Q13564 534 aa6.63□□□□□ -1.35
SPTLC1-205ENST00000477888 SQLEQ14534 574 aa6.63□□□□□ -1.35
SPTLC1-205ENST00000477888 NTRK2Q16620 822 aa6.63□□□□□ -1.35
SPTLC1-205ENST00000477888 TBCELQ5QJ74 424 aa6.63□□□□□ -1.35
SPTLC1-205ENST00000477888 PRR31Q5SQ13 230 aa6.63□□□□□ -1.35
SPTLC1-205ENST00000477888 FAM120AOSQ5T036 256 aa6.63□□□□□ -1.35
SPTLC1-205ENST00000477888 BICRALQ6AI39 1079 aa6.63□□□□□ -1.35
SPTLC1-205ENST00000477888 AGTRAPQ6RW13 159 aa6.63□□□□□ -1.35
SPTLC1-205ENST00000477888 IL17RELQ6ZVW7 336 aa6.63□□□□□ -1.35
SPTLC1-205ENST00000477888 UBE2R2Q712K3 238 aaPredicted RBP6.63□□□□□ -1.35
SPTLC1-205ENST00000477888 C9orf40Q8IXQ3 194 aa6.63□□□□□ -1.35
SPTLC1-205ENST00000477888 RFLNBQ8N5W9 214 aa6.63□□□□□ -1.35
SPTLC1-205ENST00000477888 FAM13CQ8NE31 585 aa6.63□□□□□ -1.35
SPTLC1-205ENST00000477888 KRT35Q92764 455 aa6.63□□□□□ -1.35
SPTLC1-205ENST00000477888 GTPBP3Q969Y2 492 aaKnown RBP6.63□□□□□ -1.35
SPTLC1-205ENST00000477888 REPS1Q96D71 796 aa6.63□□□□□ -1.35
SPTLC1-205ENST00000477888 PLPPR2Q96GM1 343 aa6.63□□□□□ -1.35
SPTLC1-205ENST00000477888 SNF8Q96H20 258 aa6.63□□□□□ -1.35
SPTLC1-205ENST00000477888 SENP5Q96HI0 755 aaPredicted RBP6.63□□□□□ -1.35
SPTLC1-205ENST00000477888 OR4K3Q96R72 315 aa6.63□□□□□ -1.35
SPTLC1-205ENST00000477888 NPLQ9BXD5 320 aaPredicted RBP6.63□□□□□ -1.35
SPTLC1-205ENST00000477888 GOLPH3Q9H4A6 298 aa6.63□□□□□ -1.35
SPTLC1-205ENST00000477888 EIF2B3Q9NR50 452 aaKnown RBP6.63□□□□□ -1.35
SPTLC1-205ENST00000477888 WWOXQ9NZC7 414 aa6.63□□□□□ -1.35
SPTLC1-205ENST00000477888 KLHL42Q9P2K6 505 aa6.63□□□□□ -1.35
SPTLC1-205ENST00000477888 GDF2Q9UK05 429 aaPredicted RBP6.63□□□□□ -1.35
SPTLC1-205ENST00000477888 MAPRE3Q9UPY8 281 aa6.63□□□□□ -1.35
SPTLC1-205ENST00000477888 CRYL1Q9Y2S2 319 aa6.63□□□□□ -1.35
SPTLC1-205ENST00000477888 MAGED1Q9Y5V3 778 aaPredicted RBP6.63□□□□□ -1.35
SPTLC1-205ENST00000477888 SLC35F4A4IF30 521 aa6.62□□□□□ -1.35
SPTLC1-205ENST00000477888 ELOA3DA6NLF2 546 aaPredicted RBP6.62□□□□□ -1.35
SPTLC1-205ENST00000477888 H0Y3Z8 333 aa6.62□□□□□ -1.35
SPTLC1-205ENST00000477888 UBFD1O14562 309 aaKnown RBP6.62□□□□□ -1.35
SPTLC1-205ENST00000477888 TCF21O43680 179 aa6.62□□□□□ -1.35
SPTLC1-205ENST00000477888 ZNF189O75820 626 aaPredicted RBP6.62□□□□□ -1.35
SPTLC1-205ENST00000477888 IGHV4-31P0DP07 118 aa6.62□□□□□ -1.35
SPTLC1-205ENST00000477888 PAMP19021 973 aa6.62□□□□□ -1.35
SPTLC1-205ENST00000477888 TNNI3P19429 210 aa6.62□□□□□ -1.35
SPTLC1-205ENST00000477888 TBXA2RP21731 343 aa6.62□□□□□ -1.35
SPTLC1-205ENST00000477888 CCND1P24385 295 aa6.62□□□□□ -1.35
SPTLC1-205ENST00000477888 PTPN6P29350 595 aa6.62□□□□□ -1.35
SPTLC1-205ENST00000477888 KCNJ5P48544 419 aa6.62□□□□□ -1.35
SPTLC1-205ENST00000477888 SRYQ05066 204 aa6.62□□□□□ -1.35
SPTLC1-205ENST00000477888 CUL1Q13616 776 aa6.62□□□□□ -1.35
SPTLC1-205ENST00000477888 ELOA3BQ3SY89 546 aa6.62□□□□□ -1.35
SPTLC1-205ENST00000477888 TIGD3Q6B0B8 471 aa6.62□□□□□ -1.35
SPTLC1-205ENST00000477888 SCIMPQ6UWF3 145 aa6.62□□□□□ -1.35
SPTLC1-205ENST00000477888 SBSNQ6UWP8 590 aa6.62□□□□□ -1.35
SPTLC1-205ENST00000477888 MBOAT1Q6ZNC8 495 aa6.62□□□□□ -1.35
SPTLC1-205ENST00000477888 SDCCAG8Q86SQ7 713 aaPredicted RBP6.62□□□□□ -1.35
SPTLC1-205ENST00000477888 YRDCQ86U90 279 aaKnown RBP6.62□□□□□ -1.35
SPTLC1-205ENST00000477888 PPM1NQ8N819 430 aa6.62□□□□□ -1.35
SPTLC1-205ENST00000477888 ZNF610Q8N9Z0 462 aa6.62□□□□□ -1.35
SPTLC1-205ENST00000477888 FAM47BQ8NA70 645 aa6.62□□□□□ -1.35
SPTLC1-205ENST00000477888 FAM83FQ8NEG4 500 aaPredicted RBP6.62□□□□□ -1.35
SPTLC1-205ENST00000477888 TRPV3Q8NET8 790 aa6.62□□□□□ -1.35
SPTLC1-205ENST00000477888 ELOA3Q8NG57 546 aa6.62□□□□□ -1.35
SPTLC1-205ENST00000477888 RAB3IL1Q8TBN0 382 aa6.62□□□□□ -1.35
SPTLC1-205ENST00000477888 SMAP2Q8WU79 429 aaPredicted RBP6.62□□□□□ -1.35
SPTLC1-205ENST00000477888 ATL1Q8WXF7 558 aa6.62□□□□□ -1.35
SPTLC1-205ENST00000477888 DIO2Q92813 273 aa6.62□□□□□ -1.35
SPTLC1-205ENST00000477888 ALKBH8Q96BT7 664 aaKnown RBP6.62□□□□□ -1.35
SPTLC1-205ENST00000477888 PYCR2Q96C36 320 aa6.62□□□□□ -1.35
SPTLC1-205ENST00000477888 RILPQ96NA2 401 aa6.62□□□□□ -1.35
SPTLC1-205ENST00000477888 CSF3RQ99062 836 aa6.62□□□□□ -1.35
SPTLC1-205ENST00000477888 TCF12Q99081 682 aa6.62□□□□□ -1.35
SPTLC1-205ENST00000477888 KRT12Q99456 494 aa6.62□□□□□ -1.35
SPTLC1-205ENST00000477888 HAUS8Q9BT25 410 aa6.62□□□□□ -1.35
SPTLC1-205ENST00000477888 OSBPL8Q9BZF1 889 aa6.62□□□□□ -1.35
SPTLC1-205ENST00000477888 BARX1Q9HBU1 254 aaPredicted RBP6.62□□□□□ -1.35
SPTLC1-205ENST00000477888 ETNK1Q9HBU6 452 aa6.62□□□□□ -1.35
SPTLC1-205ENST00000477888 AMFRQ9UKV5 643 aa6.62□□□□□ -1.35
SPTLC1-205ENST00000477888 PDE10AQ9Y233 779 aa6.62□□□□□ -1.35
SPTLC1-205ENST00000477888 MRPS33Q9Y291 106 aaKnown RBP6.62□□□□□ -1.35
SPTLC1-205ENST00000477888 A0A0G2JN53 185 aa6.61□□□□□ -1.35
SPTLC1-205ENST00000477888 ESPNB1AK53 854 aa6.61□□□□□ -1.35
SPTLC1-205ENST00000477888 GOLGA8KD6RF30 607 aa6.61□□□□□ -1.35
SPTLC1-205ENST00000477888 E5RI56 91 aa6.61□□□□□ -1.35
SPTLC1-205ENST00000477888 GOLGA8TH3BQL2 631 aa6.61□□□□□ -1.35
SPTLC1-205ENST00000477888 HRKO00198 91 aa6.61□□□□□ -1.35
SPTLC1-205ENST00000477888 PLOD2O00469 737 aa6.61□□□□□ -1.35
SPTLC1-205ENST00000477888 EMC8O43402 210 aa6.61□□□□□ -1.35
SPTLC1-205ENST00000477888 HCRTR2O43614 444 aa6.61□□□□□ -1.35
SPTLC1-205ENST00000477888 SSX4O60224 188 aa6.61□□□□□ -1.35
SPTLC1-205ENST00000477888 VAPBO95292 243 aa6.61□□□□□ -1.35
SPTLC1-205ENST00000477888 CD8AP01732 235 aa6.61□□□□□ -1.35
SPTLC1-205ENST00000477888 GYPCP04921 128 aa6.61□□□□□ -1.35
SPTLC1-205ENST00000477888 CD8BP10966 210 aa6.61□□□□□ -1.35
SPTLC1-205ENST00000477888 ENO3P13929 434 aaPredicted RBP6.61□□□□□ -1.35
SPTLC1-205ENST00000477888 PPP3CBP16298 524 aa6.61□□□□□ -1.35
SPTLC1-205ENST00000477888 ITGA2P17301 1181 aa6.61□□□□□ -1.35
SPTLC1-205ENST00000477888 NMBRP28336 390 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms