RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 DEFA5Q01523 94 aa12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 TCTN1Q2MV58 587 aa12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 MLIPQ5VWP3 458 aa12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 TRIQKQ629K1 86 aa12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 ZC3H14Q6PJT7 736 aaKnown RBP12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 AFTPHQ6ULP2 937 aa12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 RBMS3Q6XE24 437 aaKnown RBP12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 ZNF852Q6ZMS4 543 aa12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 GDPGP1Q6ZNW5 385 aa12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 AHSA2Q719I0 299 aa12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 REC114Q7Z4M0 266 aa12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 ADHFE1Q8IWW8 467 aa12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 TP53INP2Q8IXH6 220 aa12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 ADGRF3Q8IZF5 1079 aa12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 SCARB1Q8WTV0 552 aa12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 LRCH3Q96II8 777 aa12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 GFM1Q96RP9 751 aaKnown RBP12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 RBBP8Q99708 897 aa12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 MCOLN1Q9GZU1 580 aa12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 UNKLQ9H9P5 680 aaKnown RBP12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 PLCXD1Q9NUJ7 323 aa12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 NLKQ9UBE8 527 aa12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 SCP2D1Q9UJQ7 156 aa12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 POMT2Q9UKY4 750 aa12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 DHRS7Q9Y394 339 aa12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 CHTOPQ9Y3Y2 248 aaKnown RBP12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 PRKAB1Q9Y478 270 aa12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 CDH10Q9Y6N8 788 aa12.09□□□□□ -0.47
RTFDC1-207ENST00000477573 CACNB4O00305 520 aaPredicted RBP12.08□□□□□ -0.48
RTFDC1-207ENST00000477573 MATN4O95460 622 aa12.08□□□□□ -0.48
RTFDC1-207ENST00000477573 AP2A1O95782 977 aa12.08□□□□□ -0.48
RTFDC1-207ENST00000477573 S1PR4O95977 384 aa12.08□□□□□ -0.48
RTFDC1-207ENST00000477573 IFNA10P01566 189 aa12.08□□□□□ -0.48
RTFDC1-207ENST00000477573 STSP08842 583 aa12.08□□□□□ -0.48
RTFDC1-207ENST00000477573 CSF2RAP15509 400 aa12.08□□□□□ -0.48
RTFDC1-207ENST00000477573 NCK1P16333 377 aa12.08□□□□□ -0.48
RTFDC1-207ENST00000477573 PGAM1P18669 254 aa12.08□□□□□ -0.48
RTFDC1-207ENST00000477573 DNASE1P24855 282 aa12.08□□□□□ -0.48
RTFDC1-207ENST00000477573 PGFP49763 221 aa12.08□□□□□ -0.48
RTFDC1-207ENST00000477573 NUDT6P53370 316 aa12.08□□□□□ -0.48
RTFDC1-207ENST00000477573 ZNF155Q12901 538 aaPredicted RBP12.08□□□□□ -0.48
RTFDC1-207ENST00000477573 CAMK2DQ13557 499 aa12.08□□□□□ -0.48
RTFDC1-207ENST00000477573 GBX1Q14549 363 aa12.08□□□□□ -0.48
RTFDC1-207ENST00000477573 C9orf152Q5JTZ5 239 aa12.08□□□□□ -0.48
RTFDC1-207ENST00000477573 HECTD3Q5T447 861 aa12.08□□□□□ -0.48
RTFDC1-207ENST00000477573 ETV3LQ6ZN32 361 aa12.08□□□□□ -0.48
RTFDC1-207ENST00000477573 IPMKQ8NFU5 416 aa12.08□□□□□ -0.48
RTFDC1-207ENST00000477573 WDR20Q8TBZ3 569 aa12.08□□□□□ -0.48
RTFDC1-207ENST00000477573 ZNF675Q8TD23 568 aa12.08□□□□□ -0.48
RTFDC1-207ENST00000477573 FCRL3Q96P31 734 aaPredicted RBP12.08□□□□□ -0.48
RTFDC1-207ENST00000477573 CRISPLD2Q9H0B8 497 aa12.08□□□□□ -0.48
RTFDC1-207ENST00000477573 RNF167Q9H6Y7 350 aa12.08□□□□□ -0.48
RTFDC1-207ENST00000477573 RASSF1Q9NS23 344 aa12.08□□□□□ -0.48
RTFDC1-207ENST00000477573 C14orf105Q9NVL8 296 aa12.08□□□□□ -0.48
RTFDC1-207ENST00000477573 OSER1Q9NX31 292 aa12.08□□□□□ -0.48
RTFDC1-207ENST00000477573 GHRLQ9UBU3 117 aa12.08□□□□□ -0.48
RTFDC1-207ENST00000477573 HS3ST4Q9Y661 456 aa12.08□□□□□ -0.48
RTFDC1-207ENST00000477573 CLCA3PQ9Y6N3 262 aa12.08□□□□□ -0.48
RTFDC1-207ENST00000477573 MICAL3Q7RTP6 2002 aa12.08□□□□□ -0.48
RTFDC1-207ENST00000477573 CARNS1A5YM72 827 aa12.08□□□□□ -0.48
RTFDC1-207ENST00000477573 F5H423 210 aaPredicted RBP12.08□□□□□ -0.48
RTFDC1-207ENST00000477573 CD3EAPO15446 510 aaKnown RBP12.08□□□□□ -0.48
RTFDC1-207ENST00000477573 TGM5O43548 720 aa12.08□□□□□ -0.48
RTFDC1-207ENST00000477573 CST1P01037 141 aa12.08□□□□□ -0.48
RTFDC1-207ENST00000477573 TSPAN19P0C672 248 aa12.08□□□□□ -0.48
RTFDC1-207ENST00000477573 FOLR2P14207 255 aa12.08□□□□□ -0.48
RTFDC1-207ENST00000477573 CASP2P42575 452 aa12.08□□□□□ -0.48
RTFDC1-207ENST00000477573 SESN2P58004 480 aaPredicted RBP12.08□□□□□ -0.48
RTFDC1-207ENST00000477573 EFEMP1Q12805 493 aa12.08□□□□□ -0.48
RTFDC1-207ENST00000477573 TAF10Q12962 218 aa12.08□□□□□ -0.48
RTFDC1-207ENST00000477573 SERTAD2Q14140 314 aa12.08□□□□□ -0.48
RTFDC1-207ENST00000477573 ATP13A5Q4VNC0 1218 aa12.08□□□□□ -0.48
RTFDC1-207ENST00000477573 ACER2Q5QJU3 275 aa12.08□□□□□ -0.48
RTFDC1-207ENST00000477573 C10orf120Q5SQS8 335 aa12.08□□□□□ -0.48
RTFDC1-207ENST00000477573 PRAMEF13Q5VWM6 474 aa12.08□□□□□ -0.48
RTFDC1-207ENST00000477573 B3GNTL1Q67FW5 361 aaPredicted RBP12.08□□□□□ -0.48
RTFDC1-207ENST00000477573 LAIR1Q6GTX8 287 aa12.08□□□□□ -0.48
RTFDC1-207ENST00000477573 DHRS7BQ6IAN0 325 aaPredicted RBP12.08□□□□□ -0.48
RTFDC1-207ENST00000477573 SPESP1Q6UW49 350 aa12.08□□□□□ -0.48
RTFDC1-207ENST00000477573 FAM198BQ6UWH4 519 aa12.08□□□□□ -0.48
RTFDC1-207ENST00000477573 CMC1Q7Z7K0 106 aa12.08□□□□□ -0.48
RTFDC1-207ENST00000477573 RTL3Q8N8U3 475 aaKnown RBP12.08□□□□□ -0.48
RTFDC1-207ENST00000477573 FBXO22Q8NEZ5 403 aa12.08□□□□□ -0.48
RTFDC1-207ENST00000477573 OR52K1Q8NGK4 314 aa12.08□□□□□ -0.48
RTFDC1-207ENST00000477573 OR9I1Q8NGQ6 314 aa12.08□□□□□ -0.48
RTFDC1-207ENST00000477573 STYXQ8WUJ0 223 aa12.08□□□□□ -0.48
RTFDC1-207ENST00000477573 C3orf30Q96M34 536 aa12.08□□□□□ -0.48
RTFDC1-207ENST00000477573 PRR14Q9BWN1 585 aa12.08□□□□□ -0.48
RTFDC1-207ENST00000477573 IL1RL2Q9HB29 575 aa12.08□□□□□ -0.48
RTFDC1-207ENST00000477573 HCSTQ9UBK5 93 aa12.08□□□□□ -0.48
RTFDC1-207ENST00000477573 ZNF222Q9UK12 451 aa12.08□□□□□ -0.48
RTFDC1-207ENST00000477573 ING1Q9UK53 422 aaPredicted RBP12.08□□□□□ -0.48
RTFDC1-207ENST00000477573 TRAV19A0A0A6YYK7 116 aa12.07□□□□□ -0.48
RTFDC1-207ENST00000477573 TCRBV16S1A1N1A0A5B0 115 aa12.07□□□□□ -0.48
RTFDC1-207ENST00000477573 WDR27A2RRH5 827 aa12.07□□□□□ -0.48
RTFDC1-207ENST00000477573 NR5A2O00482 541 aa12.07□□□□□ -0.48
RTFDC1-207ENST00000477573 JCHAINP01591 159 aa12.07□□□□□ -0.48
RTFDC1-207ENST00000477573 CRYABP02511 175 aaKnown RBP12.07□□□□□ -0.48
RTFDC1-207ENST00000477573 POLBP06746 335 aa12.07□□□□□ -0.48
RTFDC1-207ENST00000477573 NUDT7P0C024 238 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms