RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 FAM95CA0A1B0GW59 222 aa6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 SH3D21A4FU49 640 aa6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 LRRC3CA6NJW4 275 aa6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 AHRRA9YTQ3 701 aa6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 HRKO00198 91 aa6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 CYR61O00622 381 aa6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 TP53I11O14683 189 aa6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 FGF17O60258 216 aa6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 CCNT2O60583 730 aaKnown RBP6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 ACSL3O95573 720 aa6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 TGFB1P01137 390 aa6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 S100BP04271 92 aaPredicted RBP6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 TMIGD3P0DMS9 266 aaPredicted RBP6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 KRT15P19012 456 aa6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 CTSSP25774 331 aa6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 GSTM2P28161 218 aa6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 SERPINB3P29508 390 aa6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 HOXC12P31275 282 aa6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 OPRM1P35372 400 aa6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 MAGEA3P43357 314 aa6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 STT3AP46977 705 aa6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 HSPA7P48741 367 aa6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 RAP1GDS1P52306 607 aa6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 SRYQ05066 204 aa6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 CRYZQ08257 329 aaKnown RBP6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 TBL3Q12788 808 aaKnown RBP6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 RCAN2Q14206 197 aa6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 ZNF267Q14586 743 aaPredicted RBP6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 DAZAP2Q15038 168 aaPredicted RBP6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 SF3B4Q15427 424 aaKnown RBP eCLIP6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 TSNQ15631 228 aaKnown RBP6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 MPEG1Q2M385 716 aa6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 ZNF791Q3KP31 576 aaPredicted RBP6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 KBTBD12Q3ZCT8 623 aa6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 PAGE2BQ5JRK9 111 aa6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 WIPI1Q5MNZ9 446 aaPredicted RBP6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 TEDDM1Q5T9Z0 273 aa6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 SHEQ5VZ18 495 aa6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 HLA-DQA1Q5Y7H0 255 aa6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 BICRALQ6AI39 1079 aa6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 TMEM64Q6YI46 380 aa6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 RNF111Q6ZNA4 994 aa6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 ADAMTSL2Q86TH1 951 aa6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 MYLK4Q86YV6 388 aaPredicted RBP6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 PRR22Q8IZ63 422 aa6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 LRRC25Q8N386 305 aaPredicted RBP6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 RASGEF1CQ8N431 466 aa6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 ACOT4Q8N9L9 421 aa6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 TRIM58Q8NG06 486 aa6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 NUBPLQ8TB37 319 aa6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 PAQR8Q8TEZ7 354 aa6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 ZNF592Q92610 1267 aa6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 ESAMQ96AP7 390 aa6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 PTCD3Q96EY7 689 aaKnown RBP6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 PERPQ96FX8 193 aa6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 SENP5Q96HI0 755 aaPredicted RBP6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 Q96MF0 132 aa6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 RILPQ96NA2 401 aa6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 TIMP4Q99727 224 aa6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 MDFIQ99750 246 aa6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 RBM24Q9BX46 236 aaKnown RBP6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 SORBS1Q9BX66 1292 aaKnown RBP6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 PHACTR1Q9C0D0 580 aa6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 PLEKHF2Q9H8W4 249 aa6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 CNOT10Q9H9A5 744 aaKnown RBP6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 UBTD1Q9HAC8 227 aa6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 LYRM4Q9HD34 91 aa6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 ACKR4Q9NPB9 350 aa6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 DNAJC11Q9NVH1 559 aa6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 BEX4Q9NWD9 120 aaPredicted RBP6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 QPCTLQ9NXS2 382 aa6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 CD274Q9NZQ7 290 aa6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 ZNF629Q9UEG4 869 aaPredicted RBP6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 CORO1CQ9ULV4 474 aaPredicted RBP6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 CHD3Q12873 2000 aaKnown RBP6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 MED12Q93074 2177 aa6.13□□□□□ -1.43
RTFDC1-206ENST00000477485 GOLGA6L10A0A0M3HER8 536 aa6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 CAPN14A8MX76 684 aa6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 INAFM1C9JVW0 142 aa6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 H0Y3Z8 333 aa6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 PGRMC1O00264 195 aaKnown RBP6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 ARID1AO14497 2285 aa6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 GNB5O14775 395 aa6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 PRKRAO75569 313 aaKnown RBP6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 HRGP04196 525 aa6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 CYP4B1P13584 511 aa6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 EPB42P16452 691 aa6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 CD53P19397 219 aa6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 ATP5A1P25705 553 aaKnown RBP6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 TLX1P31314 330 aaPredicted RBP6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 CEACAM8P31997 349 aaPredicted RBP6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 GCKP35557 465 aa6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 TIMP3P35625 211 aa6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 ELK3P41970 407 aa6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 SLC6A12P48065 614 aa6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 FBXW4P57775 412 aa6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 CDKL1Q00532 357 aa6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 SORDQ00796 357 aa6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 IRF8Q02556 426 aa6.12□□□□□ -1.43
RTFDC1-206ENST00000477485 CHIT1Q13231 466 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms