RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 OR1K1Q8NGR3 316 aa2.63□□□□□ -1.99
TARDBP-208ENST00000477447 OR4L1Q8NH43 312 aa2.63□□□□□ -1.99
TARDBP-208ENST00000477447 GOLGA5Q8TBA6 731 aa2.63□□□□□ -1.99
TARDBP-208ENST00000477447 KRT35Q92764 455 aa2.63□□□□□ -1.99
TARDBP-208ENST00000477447 C5orf30Q96GV9 206 aa2.63□□□□□ -1.99
TARDBP-208ENST00000477447 HSD17B14Q9BPX1 270 aa2.63□□□□□ -1.99
TARDBP-208ENST00000477447 FUNDC2Q9BWH2 189 aa2.63□□□□□ -1.99
TARDBP-208ENST00000477447 MRPL9Q9BYD2 267 aaKnown RBP2.63□□□□□ -1.99
TARDBP-208ENST00000477447 PNNQ9H307 717 aaKnown RBP2.63□□□□□ -1.99
TARDBP-208ENST00000477447 NT5DC2Q9H857 520 aa2.63□□□□□ -1.99
TARDBP-208ENST00000477447 EIF3KQ9UBQ5 218 aaKnown RBP2.63□□□□□ -1.99
TARDBP-208ENST00000477447 TSPAN16Q9UKR8 245 aa2.63□□□□□ -1.99
TARDBP-208ENST00000477447 SLC28A1O00337 649 aa2.62□□□□□ -1.99
TARDBP-208ENST00000477447 KINO60870 393 aaKnown RBP2.62□□□□□ -1.99
TARDBP-208ENST00000477447 PRDM1O75626 825 aa2.62□□□□□ -1.99
TARDBP-208ENST00000477447 SEMA4FO95754 770 aa2.62□□□□□ -1.99
TARDBP-208ENST00000477447 SFTPBP07988 381 aa2.62□□□□□ -1.99
TARDBP-208ENST00000477447 HMOX1P09601 288 aa2.62□□□□□ -1.99
TARDBP-208ENST00000477447 BCL3P20749 454 aa2.62□□□□□ -1.99
TARDBP-208ENST00000477447 MATKP42679 507 aa2.62□□□□□ -1.99
TARDBP-208ENST00000477447 PRELPP51888 382 aa2.62□□□□□ -1.99
TARDBP-208ENST00000477447 LIMK2P53671 638 aa2.62□□□□□ -1.99
TARDBP-208ENST00000477447 KRTAP10-5P60370 271 aa2.62□□□□□ -1.99
TARDBP-208ENST00000477447 GSTO1P78417 241 aa2.62□□□□□ -1.99
TARDBP-208ENST00000477447 GALK2Q01415 458 aa2.62□□□□□ -1.99
TARDBP-208ENST00000477447 CYLC2Q14093 348 aaPredicted RBP2.62□□□□□ -1.99
TARDBP-208ENST00000477447 TRADDQ15628 312 aa2.62□□□□□ -1.99
TARDBP-208ENST00000477447 CCL14Q16627 93 aa2.62□□□□□ -1.99
TARDBP-208ENST00000477447 MPPE1Q53F39 396 aa2.62□□□□□ -1.99
TARDBP-208ENST00000477447 ZNF506Q5JVG8 444 aa2.62□□□□□ -1.99
TARDBP-208ENST00000477447 DDI2Q5TDH0 399 aa2.62□□□□□ -1.99
TARDBP-208ENST00000477447 B3GLCTQ6Y288 498 aa2.62□□□□□ -1.99
TARDBP-208ENST00000477447 TOM1L2Q6ZVM7 507 aa2.62□□□□□ -1.99
TARDBP-208ENST00000477447 ITIH5Q86UX2 942 aa2.62□□□□□ -1.99
TARDBP-208ENST00000477447 ERC1Q8IUD2 1116 aa2.62□□□□□ -1.99
TARDBP-208ENST00000477447 LRRC49Q8IUZ0 686 aa2.62□□□□□ -1.99
TARDBP-208ENST00000477447 CCDC71Q8IV32 467 aaPredicted RBP2.62□□□□□ -1.99
TARDBP-208ENST00000477447 SLC39A11Q8N1S5 342 aa2.62□□□□□ -1.99
TARDBP-208ENST00000477447 FBXW8Q8N3Y1 598 aa2.62□□□□□ -1.99
TARDBP-208ENST00000477447 SAMD12Q8N8I0 201 aa2.62□□□□□ -1.99
TARDBP-208ENST00000477447 SIDT2Q8NBJ9 832 aaKnown RBP2.62□□□□□ -1.99
TARDBP-208ENST00000477447 SUMF1Q8NBK3 374 aa2.62□□□□□ -1.99
TARDBP-208ENST00000477447 SPC24Q8NBT2 197 aa2.62□□□□□ -1.99
TARDBP-208ENST00000477447 RELL2Q8NC24 303 aaPredicted RBP2.62□□□□□ -1.99
TARDBP-208ENST00000477447 CSNK1G2-AS1Q8NCQ2 148 aa2.62□□□□□ -1.99
TARDBP-208ENST00000477447 CHDHQ8NE62 594 aaPredicted RBP2.62□□□□□ -1.99
TARDBP-208ENST00000477447 KIAA1524Q8TCG1 905 aa2.62□□□□□ -1.99
TARDBP-208ENST00000477447 ITLN1Q8WWA0 313 aa2.62□□□□□ -1.99
TARDBP-208ENST00000477447 MRPL53Q96EL3 112 aaKnown RBP2.62□□□□□ -1.99
TARDBP-208ENST00000477447 C16orf58Q96GQ5 468 aa2.62□□□□□ -1.99
TARDBP-208ENST00000477447 CDHR1Q96JP9 859 aa2.62□□□□□ -1.99
TARDBP-208ENST00000477447 FAM213AQ9BRX8 229 aa2.62□□□□□ -1.99
TARDBP-208ENST00000477447 SLC25A19Q9HC21 320 aa2.62□□□□□ -1.99
TARDBP-208ENST00000477447 DDX28Q9NUL7 540 aaKnown RBP2.62□□□□□ -1.99
TARDBP-208ENST00000477447 ACOXLQ9NUZ1 547 aa2.62□□□□□ -1.99
TARDBP-208ENST00000477447 TAS2R16Q9NYV7 291 aa2.62□□□□□ -1.99
TARDBP-208ENST00000477447 AKAP7Q9P0M2 348 aaPredicted RBP2.62□□□□□ -1.99
TARDBP-208ENST00000477447 MTRRQ9UBK8 725 aa2.62□□□□□ -1.99
TARDBP-208ENST00000477447 DIMT1Q9UNQ2 313 aaKnown RBP2.62□□□□□ -1.99
TARDBP-208ENST00000477447 COL2A1P02458 1487 aaPredicted RBP2.61□□□□□ -1.99
TARDBP-208ENST00000477447 TRIM49BA6NDI0 452 aa2.61□□□□□ -1.99
TARDBP-208ENST00000477447 YJEFN3A6XGL0 299 aa2.61□□□□□ -1.99
TARDBP-208ENST00000477447 FOXI3A8MTJ6 420 aaPredicted RBP2.61□□□□□ -1.99
TARDBP-208ENST00000477447 MEI4A8MW99 385 aa2.61□□□□□ -1.99
TARDBP-208ENST00000477447 E9PAM4 449 aa2.61□□□□□ -1.99
TARDBP-208ENST00000477447 MELTFP08582 738 aa2.61□□□□□ -1.99
TARDBP-208ENST00000477447 MBL2P11226 248 aaPredicted RBP2.61□□□□□ -1.99
TARDBP-208ENST00000477447 FOSL2P15408 326 aa2.61□□□□□ -1.99
TARDBP-208ENST00000477447 CYP3A5P20815 502 aa2.61□□□□□ -1.99
TARDBP-208ENST00000477447 CALML3P27482 149 aa2.61□□□□□ -1.99
TARDBP-208ENST00000477447 ALDH3B1P43353 468 aa2.61□□□□□ -1.99
TARDBP-208ENST00000477447 TKTL1P51854 596 aa2.61□□□□□ -1.99
TARDBP-208ENST00000477447 HERV-K104P63124 156 aa2.61□□□□□ -1.99
TARDBP-208ENST00000477447 NPRL3Q12980 569 aa2.61□□□□□ -1.99
TARDBP-208ENST00000477447 RPA4Q13156 261 aa2.61□□□□□ -1.99
TARDBP-208ENST00000477447 MSLNQ13421 630 aaPredicted RBP2.61□□□□□ -1.99
TARDBP-208ENST00000477447 EMC2Q15006 297 aa2.61□□□□□ -1.99
TARDBP-208ENST00000477447 PCK2Q16822 640 aa2.61□□□□□ -1.99
TARDBP-208ENST00000477447 C15orf32Q32M92 178 aa2.61□□□□□ -1.99
TARDBP-208ENST00000477447 UNC50Q53HI1 259 aa2.61□□□□□ -1.99
TARDBP-208ENST00000477447 REP15Q6BDI9 236 aa2.61□□□□□ -1.99
TARDBP-208ENST00000477447 RTL6Q6ICC9 239 aa2.61□□□□□ -1.99
TARDBP-208ENST00000477447 ARMCX5Q6P1M9 558 aa2.61□□□□□ -1.99
TARDBP-208ENST00000477447 CEACAM19Q7Z692 300 aa2.61□□□□□ -1.99
TARDBP-208ENST00000477447 ZNF410Q86VK4 478 aa2.61□□□□□ -1.99
TARDBP-208ENST00000477447 HPS6Q86YV9 775 aa2.61□□□□□ -1.99
TARDBP-208ENST00000477447 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.61□□□□□ -1.99
TARDBP-208ENST00000477447 OR4F5Q8NH21 305 aa2.61□□□□□ -1.99
TARDBP-208ENST00000477447 CABS1Q96KC9 395 aa2.61□□□□□ -1.99
TARDBP-208ENST00000477447 RPGRIP1Q96KN7 1286 aa2.61□□□□□ -1.99
TARDBP-208ENST00000477447 CCDC43Q96MW1 224 aaKnown RBP2.61□□□□□ -1.99
TARDBP-208ENST00000477447 ABCG4Q9H172 646 aa2.61□□□□□ -1.99
TARDBP-208ENST00000477447 SLC26A1Q9H2B4 701 aa2.61□□□□□ -1.99
TARDBP-208ENST00000477447 GANQ9H2C0 597 aa2.61□□□□□ -1.99
TARDBP-208ENST00000477447 DPEP3Q9H4B8 488 aa2.61□□□□□ -1.99
TARDBP-208ENST00000477447 MID1IP1Q9NPA3 183 aa2.61□□□□□ -1.99
TARDBP-208ENST00000477447 NARFQ9UHQ1 456 aa2.61□□□□□ -1.99
TARDBP-208ENST00000477447 MRPL11Q9Y3B7 192 aaKnown RBP2.61□□□□□ -1.99
TARDBP-208ENST00000477447 RNF212BA8MTL3 300 aa2.6□□□□□ -1.99
TARDBP-208ENST00000477447 EEF2KO00418 725 aaKnown RBP2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms