RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 RPS11P62280 158 aaKnown RBP eCLIP3.89□□□□□ -1.79
USP16-205ENST00000474835 SELENOWP63302 87 aa3.89□□□□□ -1.79
USP16-205ENST00000474835 ST3GAL4Q11206 333 aa3.89□□□□□ -1.79
USP16-205ENST00000474835 HLXQ14774 488 aaPredicted RBP3.89□□□□□ -1.79
USP16-205ENST00000474835 CARTPTQ16568 116 aa3.89□□□□□ -1.79
USP16-205ENST00000474835 METTL11BQ5VVY1 283 aa3.89□□□□□ -1.79
USP16-205ENST00000474835 ANKRD54Q6NXT1 300 aa3.89□□□□□ -1.79
USP16-205ENST00000474835 SCUBE3Q8IX30 993 aa3.89□□□□□ -1.79
USP16-205ENST00000474835 APCDD1Q8J025 514 aa3.89□□□□□ -1.79
USP16-205ENST00000474835 SIX5Q8N196 739 aa3.89□□□□□ -1.79
USP16-205ENST00000474835 OXR1Q8N573 874 aa3.89□□□□□ -1.79
USP16-205ENST00000474835 ELMO1Q92556 727 aa3.89□□□□□ -1.79
USP16-205ENST00000474835 MYEOVQ96EZ4 313 aa3.89□□□□□ -1.79
USP16-205ENST00000474835 TTYH1Q9H313 450 aaPredicted RBP3.89□□□□□ -1.79
USP16-205ENST00000474835 MIEF1Q9NQG6 463 aa3.89□□□□□ -1.79
USP16-205ENST00000474835 SDHAF3Q9NRP4 125 aa3.89□□□□□ -1.79
USP16-205ENST00000474835 PIH1D1Q9NWS0 290 aaKnown RBP3.89□□□□□ -1.79
USP16-205ENST00000474835 THUMPD1Q9NXG2 353 aaKnown RBP3.89□□□□□ -1.79
USP16-205ENST00000474835 ERAP1Q9NZ08 941 aa3.89□□□□□ -1.79
USP16-205ENST00000474835 CLEC2DQ9UHP7 191 aa3.89□□□□□ -1.79
USP16-205ENST00000474835 CDH9Q9ULB4 789 aa3.89□□□□□ -1.79
USP16-205ENST00000474835 AURKCQ9UQB9 309 aa3.89□□□□□ -1.79
USP16-205ENST00000474835 SPTBN5Q9NRC6 3674 aaKnown RBP3.89□□□□□ -1.79
USP16-205ENST00000474835 CBX4O00257 560 aa3.89□□□□□ -1.79
USP16-205ENST00000474835 BTN3A1O00481 513 aa3.89□□□□□ -1.79
USP16-205ENST00000474835 SH3BP5O60239 455 aa3.89□□□□□ -1.79
USP16-205ENST00000474835 CLEC2LP0C7M8 214 aa3.89□□□□□ -1.79
USP16-205ENST00000474835 CCNYL3P0C7X3 344 aa3.89□□□□□ -1.79
USP16-205ENST00000474835 FAM157CP0CG43 387 aa3.89□□□□□ -1.79
USP16-205ENST00000474835 FOSL2P15408 326 aa3.89□□□□□ -1.79
USP16-205ENST00000474835 POU3F2P20265 443 aaPredicted RBP3.89□□□□□ -1.79
USP16-205ENST00000474835 F8A1P23610 371 aa3.89□□□□□ -1.79
USP16-205ENST00000474835 MMP12P39900 470 aa3.89□□□□□ -1.79
USP16-205ENST00000474835 ETV5P41161 510 aa3.89□□□□□ -1.79
USP16-205ENST00000474835 MNX1P50219 401 aaPredicted RBP3.89□□□□□ -1.79
USP16-205ENST00000474835 ZNF280AP59817 542 aaPredicted RBP3.89□□□□□ -1.79
USP16-205ENST00000474835 UBXN2AP68543 259 aa3.89□□□□□ -1.79
USP16-205ENST00000474835 INSM1Q01101 510 aaPredicted RBP3.89□□□□□ -1.79
USP16-205ENST00000474835 DSC2Q02487 901 aa3.89□□□□□ -1.79
USP16-205ENST00000474835 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.89□□□□□ -1.79
USP16-205ENST00000474835 BCL2L1Q07817 233 aa3.89□□□□□ -1.79
USP16-205ENST00000474835 RBBP4Q09028 425 aa3.89□□□□□ -1.79
USP16-205ENST00000474835 RNF212Q495C1 297 aa3.89□□□□□ -1.79
USP16-205ENST00000474835 XKR6Q5GH73 641 aa3.89□□□□□ -1.79
USP16-205ENST00000474835 LY6G6FQ5SQ64 297 aa3.89□□□□□ -1.79
USP16-205ENST00000474835 ZNF684Q5T5D7 378 aa3.89□□□□□ -1.79
USP16-205ENST00000474835 AADACL4Q5VUY2 407 aa3.89□□□□□ -1.79
USP16-205ENST00000474835 ZNF626Q68DY1 528 aa3.89□□□□□ -1.79
USP16-205ENST00000474835 ASTLQ6HA08 431 aaPredicted RBP3.89□□□□□ -1.79
USP16-205ENST00000474835 TCTN3Q6NUS6 607 aa3.89□□□□□ -1.79
USP16-205ENST00000474835 Q6ZPB1 254 aaPredicted RBP3.89□□□□□ -1.79
USP16-205ENST00000474835 GOLGA7Q7Z5G4 137 aa3.89□□□□□ -1.79
USP16-205ENST00000474835 GPR142Q7Z601 462 aa3.89□□□□□ -1.79
USP16-205ENST00000474835 PAQR7Q86WK9 346 aa3.89□□□□□ -1.79
USP16-205ENST00000474835 CDAN1Q8IWY9 1227 aa3.89□□□□□ -1.79
USP16-205ENST00000474835 SPATA6LQ8N4H0 392 aa3.89□□□□□ -1.79
USP16-205ENST00000474835 OR52B6Q8NGF0 335 aa3.89□□□□□ -1.79
USP16-205ENST00000474835 EDEM1Q92611 657 aa3.89□□□□□ -1.79
USP16-205ENST00000474835 DMRTB1Q96MA1 342 aa3.89□□□□□ -1.79
USP16-205ENST00000474835 FCRL4Q96PJ5 515 aa3.89□□□□□ -1.79
USP16-205ENST00000474835 MAPKAP1Q9BPZ7 522 aa3.89□□□□□ -1.79
USP16-205ENST00000474835 MGME1Q9BQP7 344 aa3.89□□□□□ -1.79
USP16-205ENST00000474835 YIPF4Q9BSR8 244 aa3.89□□□□□ -1.79
USP16-205ENST00000474835 NT5C1AQ9BXI3 368 aa3.89□□□□□ -1.79
USP16-205ENST00000474835 ACPTQ9BZG2 426 aa3.89□□□□□ -1.79
USP16-205ENST00000474835 CHRDQ9H2X0 955 aa3.89□□□□□ -1.79
USP16-205ENST00000474835 RASSF1Q9NS23 344 aa3.89□□□□□ -1.79
USP16-205ENST00000474835 TMEM248Q9NWD8 314 aa3.89□□□□□ -1.79
USP16-205ENST00000474835 NUDT4Q9NZJ9 180 aa3.89□□□□□ -1.79
USP16-205ENST00000474835 METTL1Q9UBP6 276 aaKnown RBP3.89□□□□□ -1.79
USP16-205ENST00000474835 ATP6V1HQ9UI12 483 aa3.89□□□□□ -1.79
USP16-205ENST00000474835 PCDHB1Q9Y5F3 818 aa3.89□□□□□ -1.79
USP16-205ENST00000474835 CCDC88CQ9P219 2028 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 ARPC4-TTLL3A0A0A6YYG9 625 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 A0A1W2PQL4 384 aaPredicted RBP3.88□□□□□ -1.79
USP16-205ENST00000474835 ZNF729A6NN14 1252 aaPredicted RBP3.88□□□□□ -1.79
USP16-205ENST00000474835 ZNF593O00488 134 aaPredicted RBP3.88□□□□□ -1.79
USP16-205ENST00000474835 STX7O15400 261 aaKnown RBP3.88□□□□□ -1.79
USP16-205ENST00000474835 MAN1A2O60476 641 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 EIF3GO75821 320 aaKnown RBP eCLIP3.88□□□□□ -1.79
USP16-205ENST00000474835 SLC10A3P09131 477 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 GIPP09681 153 aaPredicted RBP3.88□□□□□ -1.79
USP16-205ENST00000474835 NUDT7P0C024 238 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 LINC00032P0C843 101 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 CXCL8P10145 99 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 TRIM23P36406 574 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 GSTM5P46439 218 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 SLC6A9P48067 706 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 GLRBP48167 497 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 LIM2P55344 173 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 ST8SIA6P61647 398 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 CHRNB3Q05901 458 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 ZNF239Q16600 458 aaKnown RBP3.88□□□□□ -1.79
USP16-205ENST00000474835 PNLIPRP3Q17RR3 467 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 ALG11Q2TAA5 492 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 DEFB115Q30KQ5 88 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 SIRPB2Q5JXA9 342 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 STPG1Q5TH74 334 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 C9orf57Q5W0N0 161 aa3.88□□□□□ -1.79
USP16-205ENST00000474835 METRNLQ641Q3 311 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms