RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 ZNF681Q96N22 645 aa9.28□□□□□ -0.92
USP39-214ENST00000474572 OR2A5Q96R48 311 aa9.28□□□□□ -0.92
USP39-214ENST00000474572 PIP5K1AQ99755 562 aa9.28□□□□□ -0.92
USP39-214ENST00000474572 APOL4Q9BPW4 351 aa9.28□□□□□ -0.92
USP39-214ENST00000474572 ROGDIQ9GZN7 287 aa9.28□□□□□ -0.92
USP39-214ENST00000474572 PRO3102Q9H379 93 aa9.28□□□□□ -0.92
USP39-214ENST00000474572 RIBC2Q9H4K1 309 aa9.28□□□□□ -0.92
USP39-214ENST00000474572 RUBCNLQ9H714 662 aa9.28□□□□□ -0.92
USP39-214ENST00000474572 SLC24A3Q9HC58 644 aa9.28□□□□□ -0.92
USP39-214ENST00000474572 BCL2L10Q9HD36 194 aa9.28□□□□□ -0.92
USP39-214ENST00000474572 SLC2A4RGQ9NR83 387 aa9.28□□□□□ -0.92
USP39-214ENST00000474572 SEMA3GQ9NS98 782 aa9.28□□□□□ -0.92
USP39-214ENST00000474572 ACER3Q9NUN7 267 aa9.28□□□□□ -0.92
USP39-214ENST00000474572 KIF17Q9P2E2 1029 aa9.28□□□□□ -0.92
USP39-214ENST00000474572 P2RX2Q9UBL9 471 aa9.28□□□□□ -0.92
USP39-214ENST00000474572 PILRAQ9UKJ1 303 aa9.28□□□□□ -0.92
USP39-214ENST00000474572 ACAD8Q9UKU7 415 aa9.28□□□□□ -0.92
USP39-214ENST00000474572 RAB23Q9ULC3 237 aa9.28□□□□□ -0.92
USP39-214ENST00000474572 CDC14AQ9UNH5 594 aa9.28□□□□□ -0.92
USP39-214ENST00000474572 TESMINQ9Y4I5 508 aa9.28□□□□□ -0.92
USP39-214ENST00000474572 ATG4BQ9Y4P1 393 aa9.28□□□□□ -0.92
USP39-214ENST00000474572 PCDHGA6Q9Y5G7 932 aa9.28□□□□□ -0.92
USP39-214ENST00000474572 GMPPBQ9Y5P6 360 aa9.28□□□□□ -0.92
USP39-214ENST00000474572 SNX8Q9Y5X2 465 aa9.28□□□□□ -0.92
USP39-214ENST00000474572 OR5K4A6NMS3 321 aa9.27□□□□□ -0.93
USP39-214ENST00000474572 C5orf58C9J3I9 102 aa9.27□□□□□ -0.93
USP39-214ENST00000474572 PGRMC2O15173 223 aa9.27□□□□□ -0.93
USP39-214ENST00000474572 ZW10O43264 779 aa9.27□□□□□ -0.93
USP39-214ENST00000474572 PROM1O43490 865 aa9.27□□□□□ -0.93
USP39-214ENST00000474572 PRKRAO75569 313 aaKnown RBP9.27□□□□□ -0.93
USP39-214ENST00000474572 TNFP01375 233 aa9.27□□□□□ -0.93
USP39-214ENST00000474572 IFNW1P05000 195 aa9.27□□□□□ -0.93
USP39-214ENST00000474572 SERPIND1P05546 499 aa9.27□□□□□ -0.93
USP39-214ENST00000474572 UGT2B7P16662 529 aa9.27□□□□□ -0.93
USP39-214ENST00000474572 CERS1P27544 350 aa9.27□□□□□ -0.93
USP39-214ENST00000474572 EPHA2P29317 976 aa9.27□□□□□ -0.93
USP39-214ENST00000474572 GGT2P36268 569 aa9.27□□□□□ -0.93
USP39-214ENST00000474572 OR1E2P47887 323 aa9.27□□□□□ -0.93
USP39-214ENST00000474572 TMBIM6P55061 237 aa9.27□□□□□ -0.93
USP39-214ENST00000474572 CDH12P55289 794 aa9.27□□□□□ -0.93
USP39-214ENST00000474572 RPS26P62854 115 aaKnown RBP9.27□□□□□ -0.93
USP39-214ENST00000474572 IL5RAQ01344 420 aa9.27□□□□□ -0.93
USP39-214ENST00000474572 SPIBQ01892 262 aa9.27□□□□□ -0.93
USP39-214ENST00000474572 RGS1Q08116 209 aa9.27□□□□□ -0.93
USP39-214ENST00000474572 FUT5Q11128 374 aa9.27□□□□□ -0.93
USP39-214ENST00000474572 EIF2B5Q13144 721 aaKnown RBP9.27□□□□□ -0.93
USP39-214ENST00000474572 SMAD4Q13485 552 aaKnown RBP9.27□□□□□ -0.93
USP39-214ENST00000474572 SIM2Q14190 667 aaPredicted RBP9.27□□□□□ -0.93
USP39-214ENST00000474572 DUSP7Q16829 419 aa9.27□□□□□ -0.93
USP39-214ENST00000474572 EXOC3L2Q2M3D2 409 aa9.27□□□□□ -0.93
USP39-214ENST00000474572 PROX2Q3B8N5 592 aa9.27□□□□□ -0.93
USP39-214ENST00000474572 RPS26P11Q5JNZ5 115 aaPredicted RBP9.27□□□□□ -0.93
USP39-214ENST00000474572 MLIPQ5VWP3 458 aa9.27□□□□□ -0.93
USP39-214ENST00000474572 FCRL6Q6DN72 434 aa9.27□□□□□ -0.93
USP39-214ENST00000474572 FBXO42Q6P3S6 717 aa9.27□□□□□ -0.93
USP39-214ENST00000474572 TNFAIP8L2Q6P589 184 aaPredicted RBP9.27□□□□□ -0.93
USP39-214ENST00000474572 Q6ZSR6 202 aa9.27□□□□□ -0.93
USP39-214ENST00000474572 ENTHD1Q8IYW4 607 aa9.27□□□□□ -0.93
USP39-214ENST00000474572 LGI4Q8N135 537 aa9.27□□□□□ -0.93
USP39-214ENST00000474572 ZNF687Q8N1G0 1237 aa9.27□□□□□ -0.93
USP39-214ENST00000474572 PARP8Q8N3A8 854 aa9.27□□□□□ -0.93
USP39-214ENST00000474572 OR13H1Q8NG92 308 aa9.27□□□□□ -0.93
USP39-214ENST00000474572 OR56A1Q8NGH5 318 aa9.27□□□□□ -0.93
USP39-214ENST00000474572 BBS10Q8TAM1 723 aa9.27□□□□□ -0.93
USP39-214ENST00000474572 CNIH3Q8TBE1 160 aa9.27□□□□□ -0.93
USP39-214ENST00000474572 FAM174AQ8TBP5 190 aa9.27□□□□□ -0.93
USP39-214ENST00000474572 UTP15Q8TED0 518 aaKnown RBP9.27□□□□□ -0.93
USP39-214ENST00000474572 APH1BQ8WW43 257 aa9.27□□□□□ -0.93
USP39-214ENST00000474572 KLHL6Q8WZ60 621 aa9.27□□□□□ -0.93
USP39-214ENST00000474572 SGCDQ92629 289 aa9.27□□□□□ -0.93
USP39-214ENST00000474572 RSC1A1Q92681 617 aa9.27□□□□□ -0.93
USP39-214ENST00000474572 ZNF354BQ96LW1 612 aa9.27□□□□□ -0.93
USP39-214ENST00000474572 ORAI3Q9BRQ5 295 aa9.27□□□□□ -0.93
USP39-214ENST00000474572 FUZQ9BT04 418 aa9.27□□□□□ -0.93
USP39-214ENST00000474572 ADNPQ9H2P0 1102 aa9.27□□□□□ -0.93
USP39-214ENST00000474572 OR51I1Q9H343 314 aa9.27□□□□□ -0.93
USP39-214ENST00000474572 SRMSQ9H3Y6 488 aa9.27□□□□□ -0.93
USP39-214ENST00000474572 FANCEQ9HB96 536 aa9.27□□□□□ -0.93
USP39-214ENST00000474572 POLMQ9NP87 494 aaPredicted RBP9.27□□□□□ -0.93
USP39-214ENST00000474572 ZCCHC3Q9NUD5 404 aaKnown RBP9.27□□□□□ -0.93
USP39-214ENST00000474572 PLCXD1Q9NUJ7 323 aa9.27□□□□□ -0.93
USP39-214ENST00000474572 WSB2Q9NYS7 404 aaPredicted RBP9.27□□□□□ -0.93
USP39-214ENST00000474572 ACTR10Q9NZ32 417 aa9.27□□□□□ -0.93
USP39-214ENST00000474572 NTMQ9P121 344 aa9.27□□□□□ -0.93
USP39-214ENST00000474572 ENTPD4Q9Y227 616 aa9.27□□□□□ -0.93
USP39-214ENST00000474572 TPRKBQ9Y3C4 175 aa9.27□□□□□ -0.93
USP39-214ENST00000474572 ENTPD2Q9Y5L3 495 aa9.27□□□□□ -0.93
USP39-214ENST00000474572 KIR2DS5A0A0G2JLQ3 304 aa9.26□□□□□ -0.93
USP39-214ENST00000474572 A0A0G2JNG1 304 aa9.26□□□□□ -0.93
USP39-214ENST00000474572 H3BMQ9 156 aa9.26□□□□□ -0.93
USP39-214ENST00000474572 J3KTA2 159 aa9.26□□□□□ -0.93
USP39-214ENST00000474572 KIR2DS3K7RE56 304 aa9.26□□□□□ -0.93
USP39-214ENST00000474572 FFAR1O14842 300 aa9.26□□□□□ -0.93
USP39-214ENST00000474572 AXIN1O15169 862 aa9.26□□□□□ -0.93
USP39-214ENST00000474572 ASNA1O43681 348 aa9.26□□□□□ -0.93
USP39-214ENST00000474572 NARSO43776 548 aaKnown RBP9.26□□□□□ -0.93
USP39-214ENST00000474572 SEMA7AO75326 666 aa9.26□□□□□ -0.93
USP39-214ENST00000474572 WBP4O75554 376 aaKnown RBP9.26□□□□□ -0.93
USP39-214ENST00000474572 GADD45GO95257 159 aa9.26□□□□□ -0.93
USP39-214ENST00000474572 OXSR1O95747 527 aaPredicted RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms