RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 MYRIPQ8NFW9 859 aa16.64■□□□□ 0.25
UPF3A-203ENST00000474056 OR8K3Q8NH51 312 aa16.64■□□□□ 0.25
UPF3A-203ENST00000474056 ASB15Q8WXK1 588 aa16.64■□□□□ 0.25
UPF3A-203ENST00000474056 RBM18Q96H35 190 aaKnown RBP16.64■□□□□ 0.25
UPF3A-203ENST00000474056 SENP5Q96HI0 755 aaPredicted RBP16.64■□□□□ 0.25
UPF3A-203ENST00000474056 HBEGFQ99075 208 aa16.64■□□□□ 0.25
UPF3A-203ENST00000474056 WDR41Q9HAD4 459 aa16.64■□□□□ 0.25
UPF3A-203ENST00000474056 HPF1Q9NWY4 346 aa16.64■□□□□ 0.25
UPF3A-203ENST00000474056 COPS7AQ9UBW8 275 aa16.64■□□□□ 0.25
UPF3A-203ENST00000474056 SH3BGRL2Q9UJC5 107 aa16.64■□□□□ 0.25
UPF3A-203ENST00000474056 ADAM29Q9UKF5 820 aa16.64■□□□□ 0.25
UPF3A-203ENST00000474056 EMCNQ9ULC0 261 aa16.64■□□□□ 0.25
UPF3A-203ENST00000474056 SLC12A4Q9UP95 1085 aa16.64■□□□□ 0.25
UPF3A-203ENST00000474056 ERVK-11Q9UQG0 969 aa16.64■□□□□ 0.25
UPF3A-203ENST00000474056 TRGV8A0A0C4DH27 118 aa16.63■□□□□ 0.25
UPF3A-203ENST00000474056 A0A1B0GUH1 482 aa16.63■□□□□ 0.25
UPF3A-203ENST00000474056 A0A1W2PS29 197 aa16.63■□□□□ 0.25
UPF3A-203ENST00000474056 PGRMC2O15173 223 aa16.63■□□□□ 0.25
UPF3A-203ENST00000474056 ZG16O60844 167 aa16.63■□□□□ 0.25
UPF3A-203ENST00000474056 GPR75O95800 540 aa16.63■□□□□ 0.25
UPF3A-203ENST00000474056 IGKV3-11P04433 115 aa16.63■□□□□ 0.25
UPF3A-203ENST00000474056 ZNF24P17028 368 aa16.63■□□□□ 0.25
UPF3A-203ENST00000474056 IMPDH1P20839 514 aa16.63■□□□□ 0.25
UPF3A-203ENST00000474056 RFC3P40938 356 aa16.63■□□□□ 0.25
UPF3A-203ENST00000474056 GPR85P60893 370 aa16.63■□□□□ 0.25
UPF3A-203ENST00000474056 ERVK-8P63133 956 aa16.63■□□□□ 0.25
UPF3A-203ENST00000474056 IL20RBQ6UXL0 311 aa16.63■□□□□ 0.25
UPF3A-203ENST00000474056 SLC22A9Q8IVM8 553 aa16.63■□□□□ 0.25
UPF3A-203ENST00000474056 CDYL2Q8N8U2 506 aa16.63■□□□□ 0.25
UPF3A-203ENST00000474056 PSD4Q8NDX1 1056 aa16.63■□□□□ 0.25
UPF3A-203ENST00000474056 RELTQ969Z4 430 aa16.63■□□□□ 0.25
UPF3A-203ENST00000474056 ZNF382Q96SR6 550 aa16.63■□□□□ 0.25
UPF3A-203ENST00000474056 ANKZF1Q9H8Y5 726 aa16.63■□□□□ 0.25
UPF3A-203ENST00000474056 AHSPQ9NZD4 102 aa16.63■□□□□ 0.25
UPF3A-203ENST00000474056 SNX6Q9UNH7 406 aa16.63■□□□□ 0.25
UPF3A-203ENST00000474056 ERVK-19Q9WJR5 959 aa16.63■□□□□ 0.25
UPF3A-203ENST00000474056 FREM3P0C091 2139 aa16.63■□□□□ 0.25
UPF3A-203ENST00000474056 NCKAP5O14513 1909 aa16.62■□□□□ 0.25
UPF3A-203ENST00000474056 SMIM23A6NLE4 172 aa16.62■□□□□ 0.25
UPF3A-203ENST00000474056 ZNHIT1O43257 154 aa16.62■□□□□ 0.25
UPF3A-203ENST00000474056 PEX1O43933 1283 aa16.62■□□□□ 0.25
UPF3A-203ENST00000474056 OR10H2O60403 315 aa16.62■□□□□ 0.25
UPF3A-203ENST00000474056 MLYCDO95822 493 aa16.62■□□□□ 0.25
UPF3A-203ENST00000474056 CA7P43166 264 aa16.62■□□□□ 0.25
UPF3A-203ENST00000474056 PRKAA2P54646 552 aa16.62■□□□□ 0.25
UPF3A-203ENST00000474056 PER3P56645 1201 aa16.62■□□□□ 0.25
UPF3A-203ENST00000474056 RBPJQ06330 500 aa16.62■□□□□ 0.25
UPF3A-203ENST00000474056 GALNT1Q10472 559 aaPredicted RBP16.62■□□□□ 0.25
UPF3A-203ENST00000474056 RASA2Q15283 850 aa16.62■□□□□ 0.25
UPF3A-203ENST00000474056 SPRED3Q2MJR0 410 aa16.62■□□□□ 0.25
UPF3A-203ENST00000474056 KRTCAP3Q53RY4 240 aa16.62■□□□□ 0.25
UPF3A-203ENST00000474056 CCNYL2Q5T2Q4 361 aa16.62■□□□□ 0.25
UPF3A-203ENST00000474056 OR52E8Q6IFG1 317 aa16.62■□□□□ 0.25
UPF3A-203ENST00000474056 SH2D5Q6ZV89 423 aa16.62■□□□□ 0.25
UPF3A-203ENST00000474056 PAGE2Q7Z2X7 111 aa16.62■□□□□ 0.25
UPF3A-203ENST00000474056 MAMDC2Q7Z304 686 aaPredicted RBP16.62■□□□□ 0.25
UPF3A-203ENST00000474056 COMMD6Q7Z4G1 85 aa16.62■□□□□ 0.25
UPF3A-203ENST00000474056 GPALPP1Q8IXQ4 340 aa16.62■□□□□ 0.25
UPF3A-203ENST00000474056 OR5L2Q8NGL0 311 aa16.62■□□□□ 0.25
UPF3A-203ENST00000474056 EPS8L3Q8TE67 593 aaKnown RBP16.62■□□□□ 0.25
UPF3A-203ENST00000474056 L3HYPDHQ96EM0 354 aa16.62■□□□□ 0.25
UPF3A-203ENST00000474056 ART5Q96L15 291 aa16.62■□□□□ 0.25
UPF3A-203ENST00000474056 PELOQ9BRX2 385 aaKnown RBP16.62■□□□□ 0.25
UPF3A-203ENST00000474056 CNPPD1Q9BV87 410 aa16.62■□□□□ 0.25
UPF3A-203ENST00000474056 BRF2Q9HAW0 419 aa16.62■□□□□ 0.25
UPF3A-203ENST00000474056 TIMMDC1Q9NPL8 285 aa16.62■□□□□ 0.25
UPF3A-203ENST00000474056 DEPPQ9NTK1 212 aa16.62■□□□□ 0.25
UPF3A-203ENST00000474056 DCDC2Q9UHG0 476 aa16.62■□□□□ 0.25
UPF3A-203ENST00000474056 KLRC4-KLRK1H3BQV0 150 aa16.61■□□□□ 0.25
UPF3A-203ENST00000474056 MANBAO00462 879 aa16.61■□□□□ 0.25
UPF3A-203ENST00000474056 ASNA1O43681 348 aa16.61■□□□□ 0.25
UPF3A-203ENST00000474056 DYRK3O43781 588 aa16.61■□□□□ 0.25
UPF3A-203ENST00000474056 GLRA3O75311 464 aa16.61■□□□□ 0.25
UPF3A-203ENST00000474056 COL8A1P27658 744 aa16.61■□□□□ 0.25
UPF3A-203ENST00000474056 HTR6P50406 440 aa16.61■□□□□ 0.25
UPF3A-203ENST00000474056 HSF1Q00613 529 aa16.61■□□□□ 0.25
UPF3A-203ENST00000474056 TBL3Q12788 808 aaKnown RBP16.61■□□□□ 0.25
UPF3A-203ENST00000474056 ASPHQ12797 758 aa16.61■□□□□ 0.25
UPF3A-203ENST00000474056 ZNF267Q14586 743 aaPredicted RBP16.61■□□□□ 0.25
UPF3A-203ENST00000474056 C3AR1Q16581 482 aa16.61■□□□□ 0.25
UPF3A-203ENST00000474056 ZNF750Q32MQ0 723 aa16.61■□□□□ 0.25
UPF3A-203ENST00000474056 NDUFAF5Q5TEU4 345 aa16.61■□□□□ 0.25
UPF3A-203ENST00000474056 GPRIN3Q6ZVF9 776 aa16.61■□□□□ 0.25
UPF3A-203ENST00000474056 TDRPQ86YL5 185 aa16.61■□□□□ 0.25
UPF3A-203ENST00000474056 CNPY4Q8N129 248 aa16.61■□□□□ 0.25
UPF3A-203ENST00000474056 POGLUT1Q8NBL1 392 aa16.61■□□□□ 0.25
UPF3A-203ENST00000474056 NUBPLQ8TB37 319 aa16.61■□□□□ 0.25
UPF3A-203ENST00000474056 FBXL20Q96IG2 436 aa16.61■□□□□ 0.25
UPF3A-203ENST00000474056 CACNA1CQ13936 2221 aa16.61■□□□□ 0.25
UPF3A-203ENST00000474056 PINLYPA6NC86 204 aa16.6■□□□□ 0.25
UPF3A-203ENST00000474056 G3V2L1 256 aa16.6■□□□□ 0.25
UPF3A-203ENST00000474056 SLC19A2O60779 497 aa16.6■□□□□ 0.25
UPF3A-203ENST00000474056 CLPSP04118 112 aa16.6■□□□□ 0.25
UPF3A-203ENST00000474056 SLC35E2P0CK97 266 aa16.6■□□□□ 0.25
UPF3A-203ENST00000474056 KRT15P19012 456 aa16.6■□□□□ 0.25
UPF3A-203ENST00000474056 PIK3R1P27986 724 aa16.6■□□□□ 0.25
UPF3A-203ENST00000474056 MAPK12P53778 367 aa16.6■□□□□ 0.25
UPF3A-203ENST00000474056 MMP21Q8N119 569 aa16.6■□□□□ 0.25
UPF3A-203ENST00000474056 GHDCQ8N2G8 530 aa16.6■□□□□ 0.25
UPF3A-203ENST00000474056 RIT1Q92963 219 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms