RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 MON1BQ7L1V2 547 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 TRMT11Q7Z4G4 463 aaKnown RBP4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 ABRAQ8N0Z2 381 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 TRPV1Q8NER1 839 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 OR6X1Q8NH79 312 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 HMGCLL1Q8TB92 370 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 CNIH3Q8TBE1 160 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 AGR3Q8TD06 166 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 CHURC1Q8WUH1 139 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 PCNPQ8WW12 178 aaKnown RBP4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 IP6K1Q92551 441 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 RFT1Q96AA3 541 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 FAF2Q96CS3 445 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 C14orf144Q96I85 54 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 PRMT6Q96LA8 375 aaPredicted RBP4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 COL21A1Q96P44 957 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 TRMOQ9BU70 441 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 C1QTNF6Q9BXI9 259 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 SLC29A3Q9BZD2 475 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 ELAC1Q9H777 363 aaKnown RBP4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 MINDY3Q9H8M7 445 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 C14orf105Q9NVL8 296 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 SMPD4Q9NXE4 827 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 HSPBP1Q9NZL4 362 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 CCDC167Q9P0B6 97 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 UXTQ9UBK9 157 aaPredicted RBP4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 NDRG4Q9ULP0 352 aaKnown RBP4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 AGTPBP1Q9UPW5 1226 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 NCKAP1Q9Y2A7 1128 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 TP53TG5Q9Y2B4 290 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 DLGAP4Q9Y2H0 992 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 CMAHPQ9Y471 501 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 MAST2Q6P0Q8 1798 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 BAZ2BQ9UIF8 2168 aaKnown RBP4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 SLX4Q8IY92 1834 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 LOC100506127A0A0U1RQW1 187 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 PRAMEF22A3QJZ6 481 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 POM121BA6NF01 834 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 C5orf52A6NGY3 159 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 RFPL4AA6NLU0 287 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 D6RAR5 112 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 RFPL4AL1F8VTS6 287 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 INMT-MINDY4F8WBC2 141 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 SLC37A4O43826 429 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 MITFO75030 526 aaPredicted RBP4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 FAM20BO75063 409 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 ATG12O94817 140 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 RAB3DO95716 219 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 NDUFB10O96000 172 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 CFDP00746 253 aaPredicted RBP4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 CHRNGP07510 517 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 FOLR2P14207 255 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 C5AR1P21730 350 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 AKAP5P24588 427 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 PAX6P26367 422 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 CRABP1P29762 137 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 YWHABP31946 246 aaKnown RBP4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 ICAM3P32942 547 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 PTGFRP43088 359 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 MAGEA3P43357 314 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 RBP2P50120 134 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 KCNQ1P51787 676 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 NUDT6P53370 316 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 HUNKP57058 714 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 BEX3Q00994 111 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 GUCA2BQ16661 112 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 SYT16Q17RD7 645 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 FAM98BQ52LJ0 330 aaKnown RBP4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 C9orf152Q5JTZ5 239 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 TMEM31Q5JXX7 168 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 CD276Q5ZPR3 534 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 OR5M10Q6IEU7 315 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 PRR5LQ6MZQ0 368 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 SWSAP1Q6NVH7 229 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 DARS2Q6PI48 645 aaKnown RBP4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 B3GNT9Q6UX72 402 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 RPTNQ6XPR3 784 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 ABI1Q8IZP0 508 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 AGBL5Q8NDL9 886 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 C19orf18Q8NEA5 215 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 GPR151Q8TDV0 419 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 MTFMTQ96DP5 389 aaKnown RBP4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 TSPAN17Q96FV3 270 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 SENP8Q96LD8 212 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 PIGSQ96S52 555 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 CMSS1Q9BQ75 279 aaKnown RBP4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 REEP2Q9BRK0 252 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 SDCBP2Q9H190 292 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 XKR8Q9H6D3 395 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 DDX4Q9NQI0 724 aaKnown RBP4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 RCOR3Q9P2K3 495 aaPredicted RBP4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 SPASTQ9UBP0 616 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 METTL1Q9UBP6 276 aaKnown RBP4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 GHRLQ9UBU3 117 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 SEC14L3Q9UDX4 400 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 FBXL2Q9UKC9 423 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 YBX2Q9Y2T7 364 aaKnown RBP4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 PTPRJQ12913 1337 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 A6NCN8 305 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 TMEM210A6NLX4 147 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms