RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 PRKNO60260 465 aaPredicted RBP12.24□□□□□ -0.45
TPM3-216ENST00000473036 VPS4BO75351 444 aa12.24□□□□□ -0.45
TPM3-216ENST00000473036 MYO1DO94832 1006 aa12.24□□□□□ -0.45
TPM3-216ENST00000473036 JUNP05412 331 aaKnown RBP12.24□□□□□ -0.45
TPM3-216ENST00000473036 SOX18P35713 384 aa12.24□□□□□ -0.45
TPM3-216ENST00000473036 PGDP52209 483 aa12.24□□□□□ -0.45
TPM3-216ENST00000473036 DUSP2Q05923 314 aa12.24□□□□□ -0.45
TPM3-216ENST00000473036 ACTN3Q08043 901 aaPredicted RBP12.24□□□□□ -0.45
TPM3-216ENST00000473036 BTBD16Q32M84 506 aa12.24□□□□□ -0.45
TPM3-216ENST00000473036 ZNF750Q32MQ0 723 aa12.24□□□□□ -0.45
TPM3-216ENST00000473036 CCNYL2Q5T2Q4 361 aa12.24□□□□□ -0.45
TPM3-216ENST00000473036 FHL5Q5TD97 284 aa12.24□□□□□ -0.45
TPM3-216ENST00000473036 VWA5B1Q5TIE3 1220 aa12.24□□□□□ -0.45
TPM3-216ENST00000473036 FCRLBQ6BAA4 426 aa12.24□□□□□ -0.45
TPM3-216ENST00000473036 H3F3CQ6NXT2 135 aa12.24□□□□□ -0.45
TPM3-216ENST00000473036 CYP20A1Q6UW02 462 aa12.24□□□□□ -0.45
TPM3-216ENST00000473036 GBP7Q8N8V2 638 aaPredicted RBP12.24□□□□□ -0.45
TPM3-216ENST00000473036 M1APQ8TC57 530 aa12.24□□□□□ -0.45
TPM3-216ENST00000473036 AGR3Q8TD06 166 aa12.24□□□□□ -0.45
TPM3-216ENST00000473036 PPWD1Q96BP3 646 aaKnown RBP12.24□□□□□ -0.45
TPM3-216ENST00000473036 C3orf30Q96M34 536 aa12.24□□□□□ -0.45
TPM3-216ENST00000473036 LPAR4Q99677 370 aa12.24□□□□□ -0.45
TPM3-216ENST00000473036 CENPKQ9BS16 269 aa12.24□□□□□ -0.45
TPM3-216ENST00000473036 EBPLQ9BY08 206 aa12.24□□□□□ -0.45
TPM3-216ENST00000473036 MMP25Q9NPA2 562 aa12.24□□□□□ -0.45
TPM3-216ENST00000473036 PNO1Q9NRX1 252 aaKnown RBP12.24□□□□□ -0.45
TPM3-216ENST00000473036 SIRT5Q9NXA8 310 aa12.24□□□□□ -0.45
TPM3-216ENST00000473036 PTGFRNQ9P2B2 879 aa12.24□□□□□ -0.45
TPM3-216ENST00000473036 GIMAP2Q9UG22 337 aa12.24□□□□□ -0.45
TPM3-216ENST00000473036 VPS4AQ9UN37 437 aa12.24□□□□□ -0.45
TPM3-216ENST00000473036 PPIEQ9UNP9 301 aaKnown RBP12.24□□□□□ -0.45
TPM3-216ENST00000473036 EXO1Q9UQ84 846 aaKnown RBP12.24□□□□□ -0.45
TPM3-216ENST00000473036 TMEM200CA6NKL6 621 aa12.23□□□□□ -0.45
TPM3-216ENST00000473036 SLCO1B7G3V0H7 640 aa12.23□□□□□ -0.45
TPM3-216ENST00000473036 CLDN4O14493 209 aa12.23□□□□□ -0.45
TPM3-216ENST00000473036 AGFG2O95081 481 aa12.23□□□□□ -0.45
TPM3-216ENST00000473036 DDAH2O95865 285 aa12.23□□□□□ -0.45
TPM3-216ENST00000473036 F10P00742 488 aa12.23□□□□□ -0.45
TPM3-216ENST00000473036 LINC00032P0C843 101 aa12.23□□□□□ -0.45
TPM3-216ENST00000473036 NR2F6P10588 404 aa12.23□□□□□ -0.45
TPM3-216ENST00000473036 PRPH2P23942 346 aa12.23□□□□□ -0.45
TPM3-216ENST00000473036 PTGER1P34995 402 aa12.23□□□□□ -0.45
TPM3-216ENST00000473036 ZNF33BQ06732 778 aa12.23□□□□□ -0.45
TPM3-216ENST00000473036 SH2D4BQ5SQS7 431 aa12.23□□□□□ -0.45
TPM3-216ENST00000473036 NDUFAF5Q5TEU4 345 aa12.23□□□□□ -0.45
TPM3-216ENST00000473036 FAM180BQ6P0A1 224 aa12.23□□□□□ -0.45
TPM3-216ENST00000473036 GALNT18Q6P9A2 607 aa12.23□□□□□ -0.45
TPM3-216ENST00000473036 IGFL3Q6UXB1 125 aa12.23□□□□□ -0.45
TPM3-216ENST00000473036 LINC00696Q6ZRV3 163 aa12.23□□□□□ -0.45
TPM3-216ENST00000473036 RNF165Q6ZSG1 346 aa12.23□□□□□ -0.45
TPM3-216ENST00000473036 ZNF781Q8N8C0 355 aa12.23□□□□□ -0.45
TPM3-216ENST00000473036 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.23□□□□□ -0.45
TPM3-216ENST00000473036 TWIST2Q8WVJ9 160 aa12.23□□□□□ -0.45
TPM3-216ENST00000473036 ZNF75CPQ92670 426 aaPredicted RBP12.23□□□□□ -0.45
TPM3-216ENST00000473036 CCT7Q99832 543 aa12.23□□□□□ -0.45
TPM3-216ENST00000473036 MFRPQ9BY79 579 aa12.23□□□□□ -0.45
TPM3-216ENST00000473036 ILKAPQ9H0C8 392 aaPredicted RBP12.23□□□□□ -0.45
TPM3-216ENST00000473036 ADAP2Q9NPF8 381 aa12.23□□□□□ -0.45
TPM3-216ENST00000473036 MS4A12Q9NXJ0 267 aa12.23□□□□□ -0.45
TPM3-216ENST00000473036 PLA2G3Q9NZ20 509 aa12.23□□□□□ -0.45
TPM3-216ENST00000473036 AHSPQ9NZD4 102 aa12.23□□□□□ -0.45
TPM3-216ENST00000473036 PHF11Q9UIL8 331 aa12.23□□□□□ -0.45
TPM3-216ENST00000473036 MCM8Q9UJA3 840 aa12.23□□□□□ -0.45
TPM3-216ENST00000473036 MRPS33Q9Y291 106 aaKnown RBP12.23□□□□□ -0.45
TPM3-216ENST00000473036 DLGAP4Q9Y2H0 992 aa12.23□□□□□ -0.45
TPM3-216ENST00000473036 PCDHA9Q9Y5H5 950 aa12.23□□□□□ -0.45
TPM3-216ENST00000473036 ICE1Q9Y2F5 2266 aa12.22□□□□□ -0.45
TPM3-216ENST00000473036 SHANK1Q9Y566 2161 aa12.22□□□□□ -0.45
TPM3-216ENST00000473036 NPIPB8E9PQR5 432 aa12.22□□□□□ -0.45
TPM3-216ENST00000473036 PIP5K1BO14986 540 aa12.22□□□□□ -0.45
TPM3-216ENST00000473036 PCDH7O60245 1069 aa12.22□□□□□ -0.45
TPM3-216ENST00000473036 GPR75O95800 540 aa12.22□□□□□ -0.45
TPM3-216ENST00000473036 CLPSP04118 112 aa12.22□□□□□ -0.45
TPM3-216ENST00000473036 TACR1P25103 407 aa12.22□□□□□ -0.45
TPM3-216ENST00000473036 TIA1P31483 386 aaKnown RBP eCLIP12.22□□□□□ -0.45
TPM3-216ENST00000473036 STT3AP46977 705 aa12.22□□□□□ -0.45
TPM3-216ENST00000473036 MAPK12P53778 367 aa12.22□□□□□ -0.45
TPM3-216ENST00000473036 TAS2R50P59544 299 aa12.22□□□□□ -0.45
TPM3-216ENST00000473036 ABCE1P61221 599 aaKnown RBP12.22□□□□□ -0.45
TPM3-216ENST00000473036 BST1Q10588 318 aa12.22□□□□□ -0.45
TPM3-216ENST00000473036 STX4Q12846 297 aa12.22□□□□□ -0.45
TPM3-216ENST00000473036 ELAVL1Q15717 326 aaKnown RBP12.22□□□□□ -0.45
TPM3-216ENST00000473036 XKR7Q5GH72 579 aa12.22□□□□□ -0.45
TPM3-216ENST00000473036 AGAP7PQ5VUJ5 663 aa12.22□□□□□ -0.45
TPM3-216ENST00000473036 C16orf47Q6ZP98 133 aaPredicted RBP12.22□□□□□ -0.45
TPM3-216ENST00000473036 PAGE2Q7Z2X7 111 aa12.22□□□□□ -0.45
TPM3-216ENST00000473036 CRLF3Q8IUI8 442 aa12.22□□□□□ -0.45
TPM3-216ENST00000473036 CLYBLQ8N0X4 340 aa12.22□□□□□ -0.45
TPM3-216ENST00000473036 CATSPER1Q8NEC5 780 aa12.22□□□□□ -0.45
TPM3-216ENST00000473036 C16orf78Q8WTQ4 265 aa12.22□□□□□ -0.45
TPM3-216ENST00000473036 SSC4DQ8WTU2 575 aa12.22□□□□□ -0.45
TPM3-216ENST00000473036 TANKQ92844 425 aa12.22□□□□□ -0.45
TPM3-216ENST00000473036 NCLNQ969V3 563 aa12.22□□□□□ -0.45
TPM3-216ENST00000473036 VPS50Q96JG6 964 aa12.22□□□□□ -0.45
TPM3-216ENST00000473036 FCRL1Q96LA6 429 aa12.22□□□□□ -0.45
TPM3-216ENST00000473036 AGAP4Q96P64 663 aa12.22□□□□□ -0.45
TPM3-216ENST00000473036 LUZP4Q9P127 313 aa12.22□□□□□ -0.45
TPM3-216ENST00000473036 ZNF451Q9Y4E5 1061 aa12.22□□□□□ -0.45
TPM3-216ENST00000473036 POLR3HQ9Y535 204 aaPredicted RBP12.22□□□□□ -0.45
TPM3-216ENST00000473036 PCDHGB7Q9Y5F8 929 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms