RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 A0A1B0GTQ1 180 aa17.09■□□□□ 0.33
SMC4-211ENST00000469858 TXNDC9O14530 226 aa17.09■□□□□ 0.33
SMC4-211ENST00000469858 DUX1O43812 170 aa17.09■□□□□ 0.33
SMC4-211ENST00000469858 ARAFP10398 606 aa17.09■□□□□ 0.33
SMC4-211ENST00000469858 CRYBA2P53672 197 aa17.09■□□□□ 0.33
SMC4-211ENST00000469858 SHC2P98077 582 aa17.09■□□□□ 0.33
SMC4-211ENST00000469858 CEBPEQ15744 281 aa17.09■□□□□ 0.33
SMC4-211ENST00000469858 ZNF630Q2M218 657 aaPredicted RBP17.09■□□□□ 0.33
SMC4-211ENST00000469858 PRTGQ2VWP7 1150 aa17.09■□□□□ 0.33
SMC4-211ENST00000469858 HLA-BQ31612 363 aa17.09■□□□□ 0.33
SMC4-211ENST00000469858 TMEM107Q6UX40 140 aa17.09■□□□□ 0.33
SMC4-211ENST00000469858 CBLL1Q75N03 491 aa17.09■□□□□ 0.33
SMC4-211ENST00000469858 VTCN1Q7Z7D3 282 aa17.09■□□□□ 0.33
SMC4-211ENST00000469858 OR9A2Q8NGT5 310 aa17.09■□□□□ 0.33
SMC4-211ENST00000469858 SLC35G5Q96KT7 338 aa17.09■□□□□ 0.33
SMC4-211ENST00000469858 CD180Q99467 661 aa17.09■□□□□ 0.33
SMC4-211ENST00000469858 PDE7BQ9NP56 450 aa17.09■□□□□ 0.33
SMC4-211ENST00000469858 NLGN3Q9NZ94 848 aa17.09■□□□□ 0.33
SMC4-211ENST00000469858 RP1P56715 2156 aa17.09■□□□□ 0.33
SMC4-211ENST00000469858 RDH16O75452 317 aa17.09■□□□□ 0.33
SMC4-211ENST00000469858 GCM2O75603 506 aaPredicted RBP17.09■□□□□ 0.33
SMC4-211ENST00000469858 CST1P01037 141 aa17.09■□□□□ 0.33
SMC4-211ENST00000469858 UQCRBP14927 111 aa17.09■□□□□ 0.33
SMC4-211ENST00000469858 PRKAG1P54619 331 aa17.09■□□□□ 0.33
SMC4-211ENST00000469858 EEF1A2Q05639 463 aaKnown RBP17.09■□□□□ 0.33
SMC4-211ENST00000469858 EIF3MQ7L2H7 374 aaKnown RBP17.09■□□□□ 0.33
SMC4-211ENST00000469858 OR4N5Q8IXE1 308 aa17.09■□□□□ 0.33
SMC4-211ENST00000469858 ARHGEF39Q8N4T4 335 aa17.09■□□□□ 0.33
SMC4-211ENST00000469858 CBR4Q8N4T8 237 aa17.09■□□□□ 0.33
SMC4-211ENST00000469858 OR9A4Q8NGU2 314 aa17.09■□□□□ 0.33
SMC4-211ENST00000469858 RAB8BQ92930 207 aa17.09■□□□□ 0.33
SMC4-211ENST00000469858 TPD52L3Q96J77 140 aa17.09■□□□□ 0.33
SMC4-211ENST00000469858 HSH2DQ96JZ2 352 aa17.09■□□□□ 0.33
SMC4-211ENST00000469858 BTBD9Q96Q07 612 aa17.09■□□□□ 0.33
SMC4-211ENST00000469858 C9orf16Q9BUW7 83 aa17.09■□□□□ 0.33
SMC4-211ENST00000469858 ASPSCR1Q9BZE9 553 aa17.09■□□□□ 0.33
SMC4-211ENST00000469858 PLCL2Q9UPR0 1127 aa17.09■□□□□ 0.33
SMC4-211ENST00000469858 CLCA2Q9UQC9 943 aa17.09■□□□□ 0.33
SMC4-211ENST00000469858 B4GAT1O43505 415 aa17.08■□□□□ 0.33
SMC4-211ENST00000469858 ZBTB11O95625 1053 aaPredicted RBP17.08■□□□□ 0.33
SMC4-211ENST00000469858 OPN1SWP03999 348 aa17.08■□□□□ 0.33
SMC4-211ENST00000469858 ZNF23P17027 643 aa17.08■□□□□ 0.33
SMC4-211ENST00000469858 GPR3P46089 330 aa17.08■□□□□ 0.33
SMC4-211ENST00000469858 GABRA4P48169 554 aa17.08■□□□□ 0.33
SMC4-211ENST00000469858 LTB4RQ15722 352 aa17.08■□□□□ 0.33
SMC4-211ENST00000469858 GPR19Q15760 415 aa17.08■□□□□ 0.33
SMC4-211ENST00000469858 CYBRD1Q53TN4 286 aa17.08■□□□□ 0.33
SMC4-211ENST00000469858 TMTC4Q5T4D3 741 aa17.08■□□□□ 0.33
SMC4-211ENST00000469858 INTS11Q5TA45 600 aaKnown RBP17.08■□□□□ 0.33
SMC4-211ENST00000469858 TLDC1Q6P9B6 456 aa17.08■□□□□ 0.33
SMC4-211ENST00000469858 TMEM64Q6YI46 380 aa17.08■□□□□ 0.33
SMC4-211ENST00000469858 USP53Q70EK8 1073 aa17.08■□□□□ 0.33
SMC4-211ENST00000469858 FKBP9P1Q75LS8 142 aa17.08■□□□□ 0.33
SMC4-211ENST00000469858 KANSL1Q7Z3B3 1105 aa17.08■□□□□ 0.33
SMC4-211ENST00000469858 CA13Q8N1Q1 262 aa17.08■□□□□ 0.33
SMC4-211ENST00000469858 LRRC25Q8N386 305 aaPredicted RBP17.08■□□□□ 0.33
SMC4-211ENST00000469858 OR4K14Q8NGD5 310 aa17.08■□□□□ 0.33
SMC4-211ENST00000469858 N4BP2L2Q92802 583 aaPredicted RBP17.08■□□□□ 0.33
SMC4-211ENST00000469858 COL26A1Q96A83 441 aa17.08■□□□□ 0.33
SMC4-211ENST00000469858 EPB41L1Q9H4G0 881 aa17.08■□□□□ 0.33
SMC4-211ENST00000469858 SERHL2Q9H4I8 314 aa17.08■□□□□ 0.33
SMC4-211ENST00000469858 NTN4Q9HB63 628 aa17.08■□□□□ 0.33
SMC4-211ENST00000469858 ADPRHL2Q9NX46 363 aa17.08■□□□□ 0.33
SMC4-211ENST00000469858 FBXO4Q9UKT5 387 aa17.08■□□□□ 0.33
SMC4-211ENST00000469858 ANGPT4Q9Y264 503 aa17.08■□□□□ 0.33
SMC4-211ENST00000469858 NCOR1O75376 2440 aa17.08■□□□□ 0.32
SMC4-211ENST00000469858 A0A0A6YYC8 382 aaPredicted RBP17.08■□□□□ 0.32
SMC4-211ENST00000469858 I3L1I5 382 aaPredicted RBP17.08■□□□□ 0.32
SMC4-211ENST00000469858 MC3RP41968 323 aa17.08■□□□□ 0.32
SMC4-211ENST00000469858 SEPHS1P49903 392 aa17.08■□□□□ 0.32
SMC4-211ENST00000469858 XKP51811 444 aa17.08■□□□□ 0.32
SMC4-211ENST00000469858 GPLD1P80108 840 aa17.08■□□□□ 0.32
SMC4-211ENST00000469858 CFHR1Q03591 330 aa17.08■□□□□ 0.32
SMC4-211ENST00000469858 FOLH1Q04609 750 aa17.08■□□□□ 0.32
SMC4-211ENST00000469858 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.08■□□□□ 0.32
SMC4-211ENST00000469858 SNAP47Q5SQN1 464 aa17.08■□□□□ 0.32
SMC4-211ENST00000469858 PPP4R4Q6NUP7 873 aa17.08■□□□□ 0.32
SMC4-211ENST00000469858 PLXDC1Q8IUK5 500 aa17.08■□□□□ 0.32
SMC4-211ENST00000469858 ZDHHC21Q8IVQ6 265 aa17.08■□□□□ 0.32
SMC4-211ENST00000469858 SLC44A2Q8IWA5 706 aaPredicted RBP17.08■□□□□ 0.32
SMC4-211ENST00000469858 TTC29Q8NA56 475 aaPredicted RBP17.08■□□□□ 0.32
SMC4-211ENST00000469858 SFXN5Q8TD22 340 aa17.08■□□□□ 0.32
SMC4-211ENST00000469858 SAP25Q8TEE9 199 aa17.08■□□□□ 0.32
SMC4-211ENST00000469858 ZC3H10Q96K80 434 aaKnown RBP17.08■□□□□ 0.32
SMC4-211ENST00000469858 DUSP23Q9BVJ7 150 aa17.08■□□□□ 0.32
SMC4-211ENST00000469858 TMEM9Q9P0T7 183 aa17.08■□□□□ 0.32
SMC4-211ENST00000469858 DNAJB9Q9UBS3 223 aa17.08■□□□□ 0.32
SMC4-211ENST00000469858 CCDC88CQ9P219 2028 aa17.07■□□□□ 0.32
SMC4-211ENST00000469858 C7orf72A4D263 438 aa17.07■□□□□ 0.32
SMC4-211ENST00000469858 FAM227AF5H4B4 570 aa17.07■□□□□ 0.32
SMC4-211ENST00000469858 HMGN4O00479 90 aa17.07■□□□□ 0.32
SMC4-211ENST00000469858 GNGT2O14610 69 aa17.07■□□□□ 0.32
SMC4-211ENST00000469858 CASC3O15234 703 aaKnown RBP17.07■□□□□ 0.32
SMC4-211ENST00000469858 ACOX3O15254 700 aa17.07■□□□□ 0.32
SMC4-211ENST00000469858 SUV39H1O43463 412 aa17.07■□□□□ 0.32
SMC4-211ENST00000469858 MED26O95402 600 aa17.07■□□□□ 0.32
SMC4-211ENST00000469858 BCHEP06276 602 aa17.07■□□□□ 0.32
SMC4-211ENST00000469858 HOXB6P17509 224 aaKnown RBP17.07■□□□□ 0.32
SMC4-211ENST00000469858 CSF2RBP32927 897 aa17.07■□□□□ 0.32
SMC4-211ENST00000469858 ID2Q02363 134 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms