RNA–Protein interactions for RNA: ENST00000469608.5

CALCA-204, Transcript of calcitonin related polypeptide alpha, humanhuman

TSL 1 (best)

Gene CALCA, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCA-204ENST00000469608 ADGRG4Q8IZF6 3080 aa13.13□□□□□ -0.31
CALCA-204ENST00000469608 POLQO75417 2590 aa13.13□□□□□ -0.31
CALCA-204ENST00000469608 INTS1Q8N201 2190 aaKnown RBP13.13□□□□□ -0.31
CALCA-204ENST00000469608 DCHS2Q6V1P9 2916 aa13.12□□□□□ -0.31
CALCA-204ENST00000469608 PHF3Q92576 2039 aaKnown RBP13.12□□□□□ -0.31
CALCA-204ENST00000469608 A0A1W2PR48 441 aa13.12□□□□□ -0.31
CALCA-204ENST00000469608 WASHC1A8K0Z3 465 aa13.12□□□□□ -0.31
CALCA-204ENST00000469608 TRIM49D1C9J1S8 452 aa13.12□□□□□ -0.31
CALCA-204ENST00000469608 ADAM10O14672 748 aa13.12□□□□□ -0.31
CALCA-204ENST00000469608 SMIM24O75264 130 aa13.12□□□□□ -0.31
CALCA-204ENST00000469608 KRT38O76015 456 aa13.12□□□□□ -0.31
CALCA-204ENST00000469608 CLDN14O95500 239 aa13.12□□□□□ -0.31
CALCA-204ENST00000469608 AIFM1O95831 613 aa13.12□□□□□ -0.31
CALCA-204ENST00000469608 RBP1P09455 135 aa13.12□□□□□ -0.31
CALCA-204ENST00000469608 FAM58BPP0C7Q3 252 aa13.12□□□□□ -0.31
CALCA-204ENST00000469608 CTAGE8P0CG41 777 aa13.12□□□□□ -0.31
CALCA-204ENST00000469608 CCL3P10147 92 aa13.12□□□□□ -0.31
CALCA-204ENST00000469608 AGAP20933 346 aa13.12□□□□□ -0.31
CALCA-204ENST00000469608 ECHS1P30084 290 aa13.12□□□□□ -0.31
CALCA-204ENST00000469608 MAGEA12P43365 314 aa13.12□□□□□ -0.31
CALCA-204ENST00000469608 SERPINB9P50453 376 aa13.12□□□□□ -0.31
CALCA-204ENST00000469608 HERVK_113P63132 956 aa13.12□□□□□ -0.31
CALCA-204ENST00000469608 ERVK-8P63133 956 aa13.12□□□□□ -0.31
CALCA-204ENST00000469608 CUL3Q13618 768 aa13.12□□□□□ -0.31
CALCA-204ENST00000469608 TTC19Q6DKK2 380 aaPredicted RBP13.12□□□□□ -0.31
CALCA-204ENST00000469608 OPN5Q6U736 354 aa13.12□□□□□ -0.31
CALCA-204ENST00000469608 FAM47EQ6ZV65 393 aa13.12□□□□□ -0.31
CALCA-204ENST00000469608 RPS27LQ71UM5 84 aaKnown RBP13.12□□□□□ -0.31
CALCA-204ENST00000469608 NUDT13Q86X67 352 aa13.12□□□□□ -0.31
CALCA-204ENST00000469608 CTAGE4Q8IX94 777 aa13.12□□□□□ -0.31
CALCA-204ENST00000469608 L3MBTL4Q8NA19 623 aa13.12□□□□□ -0.31
CALCA-204ENST00000469608 WDR20Q8TBZ3 569 aa13.12□□□□□ -0.31
CALCA-204ENST00000469608 ISL2Q96A47 359 aa13.12□□□□□ -0.31
CALCA-204ENST00000469608 FBXL20Q96IG2 436 aa13.12□□□□□ -0.31
CALCA-204ENST00000469608 ART5Q96L15 291 aa13.12□□□□□ -0.31
CALCA-204ENST00000469608 DMRTA2Q96SC8 542 aa13.12□□□□□ -0.31
CALCA-204ENST00000469608 ERVK-6Q9BXR3 956 aa13.12□□□□□ -0.31
CALCA-204ENST00000469608 FUT8Q9BYC5 575 aa13.12□□□□□ -0.31
CALCA-204ENST00000469608 TTTY12Q9BZ98 90 aa13.12□□□□□ -0.31
CALCA-204ENST00000469608 TSPYL1Q9H0U9 437 aa13.12□□□□□ -0.31
CALCA-204ENST00000469608 WDR41Q9HAD4 459 aa13.12□□□□□ -0.31
CALCA-204ENST00000469608 PCTPQ9UKL6 214 aa13.12□□□□□ -0.31
CALCA-204ENST00000469608 ERVK-19Q9WJR5 959 aa13.12□□□□□ -0.31
CALCA-204ENST00000469608 ASB4Q9Y574 426 aa13.12□□□□□ -0.31
CALCA-204ENST00000469608 NINQ8N4C6 2090 aa13.12□□□□□ -0.31
CALCA-204ENST00000469608 NCKAP5O14513 1909 aa13.11□□□□□ -0.31
CALCA-204ENST00000469608 C19orf84I3L1E1 186 aa13.11□□□□□ -0.31
CALCA-204ENST00000469608 FOXE1O00358 373 aaPredicted RBP13.11□□□□□ -0.31
CALCA-204ENST00000469608 PROM1O43490 865 aa13.11□□□□□ -0.31
CALCA-204ENST00000469608 GPR75O95800 540 aa13.11□□□□□ -0.31
CALCA-204ENST00000469608 IGKV3-11P04433 115 aa13.11□□□□□ -0.31
CALCA-204ENST00000469608 P04436 131 aa13.11□□□□□ -0.31
CALCA-204ENST00000469608 DNASE1L1P49184 302 aa13.11□□□□□ -0.31
CALCA-204ENST00000469608 TRAF3Q13114 568 aa13.11□□□□□ -0.31
CALCA-204ENST00000469608 ZNF267Q14586 743 aaPredicted RBP13.11□□□□□ -0.31
CALCA-204ENST00000469608 TSNAXIP1Q2TAA8 658 aa13.11□□□□□ -0.31
CALCA-204ENST00000469608 SGO1Q5FBB7 561 aa13.11□□□□□ -0.31
CALCA-204ENST00000469608 FRG2Q64ET8 278 aa13.11□□□□□ -0.31
CALCA-204ENST00000469608 MRM1Q6IN84 353 aaKnown RBP13.11□□□□□ -0.31
CALCA-204ENST00000469608 METTL2BQ6P1Q9 378 aaKnown RBP13.11□□□□□ -0.31
CALCA-204ENST00000469608 ARHGAP11AQ6P4F7 1023 aa13.11□□□□□ -0.31
CALCA-204ENST00000469608 RNF111Q6ZNA4 994 aa13.11□□□□□ -0.31
CALCA-204ENST00000469608 SLC22A16Q86VW1 577 aa13.11□□□□□ -0.31
CALCA-204ENST00000469608 ST13P4Q8IZP2 240 aaPredicted RBP13.11□□□□□ -0.31
CALCA-204ENST00000469608 GOLM1Q8NBJ4 401 aa13.11□□□□□ -0.31
CALCA-204ENST00000469608 C7orf57Q8NEG2 295 aa13.11□□□□□ -0.31
CALCA-204ENST00000469608 NUBPLQ8TB37 319 aa13.11□□□□□ -0.31
CALCA-204ENST00000469608 SLC22A8Q8TCC7 542 aa13.11□□□□□ -0.31
CALCA-204ENST00000469608 PHF10Q8WUB8 498 aaKnown RBP13.11□□□□□ -0.31
CALCA-204ENST00000469608 DCAKDQ8WVC6 231 aa13.11□□□□□ -0.31
CALCA-204ENST00000469608 UCN3Q969E3 161 aa13.11□□□□□ -0.31
CALCA-204ENST00000469608 SDCCAG3Q96C92 435 aa13.11□□□□□ -0.31
CALCA-204ENST00000469608 FRG2BQ96QU4 278 aa13.11□□□□□ -0.31
CALCA-204ENST00000469608 SERPINI1Q99574 410 aa13.11□□□□□ -0.31
CALCA-204ENST00000469608 FAM173AQ9BQD7 235 aa13.11□□□□□ -0.31
CALCA-204ENST00000469608 PELOQ9BRX2 385 aaKnown RBP13.11□□□□□ -0.31
CALCA-204ENST00000469608 DDX31Q9H8H2 851 aaKnown RBP13.11□□□□□ -0.31
CALCA-204ENST00000469608 SEMA4BQ9NPR2 832 aaPredicted RBP13.11□□□□□ -0.31
CALCA-204ENST00000469608 SACM1LQ9NTJ5 587 aa13.11□□□□□ -0.31
CALCA-204ENST00000469608 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.11□□□□□ -0.31
CALCA-204ENST00000469608 TMCO1Q9UM00 188 aa13.11□□□□□ -0.31
CALCA-204ENST00000469608 LIPGQ9Y5X9 500 aa13.11□□□□□ -0.31
CALCA-204ENST00000469608 EXPH5Q8NEV8 1989 aa13.11□□□□□ -0.31
CALCA-204ENST00000469608 FREM3P0C091 2139 aa13.1□□□□□ -0.31
CALCA-204ENST00000469608 CCDC168Q8NDH2 2452 aa13.1□□□□□ -0.31
CALCA-204ENST00000469608 A0A087WUV0 522 aaPredicted RBP13.1□□□□□ -0.31
CALCA-204ENST00000469608 IQANK1A0A1B0GTG1 560 aa13.1□□□□□ -0.31
CALCA-204ENST00000469608 EXOC1LA0A1B0GW35 172 aa13.1□□□□□ -0.31
CALCA-204ENST00000469608 A0A1W2PS29 197 aa13.1□□□□□ -0.31
CALCA-204ENST00000469608 STX16-NPEPL1H3BU86 382 aa13.1□□□□□ -0.31
CALCA-204ENST00000469608 STX16O14662 325 aa13.1□□□□□ -0.31
CALCA-204ENST00000469608 SEMA3DO95025 777 aa13.1□□□□□ -0.31
CALCA-204ENST00000469608 TSPAN8P19075 237 aa13.1□□□□□ -0.31
CALCA-204ENST00000469608 CNR1P21554 472 aa13.1□□□□□ -0.31
CALCA-204ENST00000469608 ARFIP1P53367 373 aa13.1□□□□□ -0.31
CALCA-204ENST00000469608 IFT88Q13099 833 aa13.1□□□□□ -0.31
CALCA-204ENST00000469608 MPEG1Q2M385 716 aa13.1□□□□□ -0.31
CALCA-204ENST00000469608 PIGGQ5H8A4 983 aa13.1□□□□□ -0.31
CALCA-204ENST00000469608 FAM219BQ5XKK7 198 aa13.1□□□□□ -0.31
CALCA-204ENST00000469608 OR52E8Q6IFG1 317 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms