RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 FBXL20Q96IG2 436 aa17.7■□□□□ 0.42
COL7A1-207ENST00000467985 SGCZQ96LD1 299 aa17.7■□□□□ 0.42
COL7A1-207ENST00000467985 LIN28AQ9H9Z2 209 aaKnown RBP17.7■□□□□ 0.42
COL7A1-207ENST00000467985 AHSPQ9NZD4 102 aa17.7■□□□□ 0.42
COL7A1-207ENST00000467985 TINAGQ9UJW2 476 aa17.7■□□□□ 0.42
COL7A1-207ENST00000467985 ASB4Q9Y574 426 aa17.7■□□□□ 0.42
COL7A1-207ENST00000467985 PRSS44E7EML9 344 aa17.69■□□□□ 0.42
COL7A1-207ENST00000467985 PRRG2O14669 202 aa17.69■□□□□ 0.42
COL7A1-207ENST00000467985 CTIFO43310 598 aaKnown RBP17.69■□□□□ 0.42
COL7A1-207ENST00000467985 EEDO75530 441 aaKnown RBP17.69■□□□□ 0.42
COL7A1-207ENST00000467985 GPR75O95800 540 aa17.69■□□□□ 0.42
COL7A1-207ENST00000467985 OTCP00480 354 aa17.69■□□□□ 0.42
COL7A1-207ENST00000467985 NR2F6P10588 404 aa17.69■□□□□ 0.42
COL7A1-207ENST00000467985 TRAF3Q13114 568 aa17.69■□□□□ 0.42
COL7A1-207ENST00000467985 GGTA1PQ4G0N0 100 aa17.69■□□□□ 0.42
COL7A1-207ENST00000467985 C18orf63Q68DL7 685 aa17.69■□□□□ 0.42
COL7A1-207ENST00000467985 C16orf47Q6ZP98 133 aaPredicted RBP17.69■□□□□ 0.42
COL7A1-207ENST00000467985 RTL4Q6ZR62 310 aa17.69■□□□□ 0.42
COL7A1-207ENST00000467985 RGS9BPQ6ZS82 235 aa17.69■□□□□ 0.42
COL7A1-207ENST00000467985 PAGE2Q7Z2X7 111 aa17.69■□□□□ 0.42
COL7A1-207ENST00000467985 ZNF321PQ8N8H1 164 aa17.69■□□□□ 0.42
COL7A1-207ENST00000467985 GOLM1Q8NBJ4 401 aa17.69■□□□□ 0.42
COL7A1-207ENST00000467985 NUBPLQ8TB37 319 aa17.69■□□□□ 0.42
COL7A1-207ENST00000467985 CDK15Q96Q40 435 aa17.69■□□□□ 0.42
COL7A1-207ENST00000467985 ADAM29Q9UKF5 820 aa17.69■□□□□ 0.42
COL7A1-207ENST00000467985 DCHS2Q6V1P9 2916 aa17.69■□□□□ 0.42
COL7A1-207ENST00000467985 ADGRG4Q8IZF6 3080 aa17.69■□□□□ 0.42
COL7A1-207ENST00000467985 PCNX1Q96RV3 2341 aa17.69■□□□□ 0.42
COL7A1-207ENST00000467985 GTF3C1Q12789 2109 aa17.68■□□□□ 0.42
COL7A1-207ENST00000467985 HNRNPRO43390 633 aaKnown RBP17.68■□□□□ 0.42
COL7A1-207ENST00000467985 TMPRSS11DO60235 418 aa17.68■□□□□ 0.42
COL7A1-207ENST00000467985 OR10H2O60403 315 aa17.68■□□□□ 0.42
COL7A1-207ENST00000467985 IGKV3-11P04433 115 aa17.68■□□□□ 0.42
COL7A1-207ENST00000467985 RPS17P08708 135 aaKnown RBP17.68■□□□□ 0.42
COL7A1-207ENST00000467985 GALNSP34059 522 aa17.68■□□□□ 0.42
COL7A1-207ENST00000467985 GPR85P60893 370 aa17.68■□□□□ 0.42
COL7A1-207ENST00000467985 ADGRD1Q6QNK2 874 aa17.68■□□□□ 0.42
COL7A1-207ENST00000467985 TIFABQ6ZNK6 161 aa17.68■□□□□ 0.42
COL7A1-207ENST00000467985 MILR1Q7Z6M3 343 aa17.68■□□□□ 0.42
COL7A1-207ENST00000467985 SLC15A4Q8N697 577 aa17.68■□□□□ 0.42
COL7A1-207ENST00000467985 MTFMTQ96DP5 389 aaKnown RBP17.68■□□□□ 0.42
COL7A1-207ENST00000467985 C1QTNF3Q9BXJ4 246 aa17.68■□□□□ 0.42
COL7A1-207ENST00000467985 ELOVL6Q9H5J4 265 aa17.68■□□□□ 0.42
COL7A1-207ENST00000467985 RUBCNLQ9H714 662 aa17.68■□□□□ 0.42
COL7A1-207ENST00000467985 ZBTB26Q9HCK0 441 aa17.68■□□□□ 0.42
COL7A1-207ENST00000467985 SEMA4BQ9NPR2 832 aaPredicted RBP17.68■□□□□ 0.42
COL7A1-207ENST00000467985 ARGLU1Q9NWB6 273 aaPredicted RBP17.68■□□□□ 0.42
COL7A1-207ENST00000467985 MEMO1Q9Y316 297 aa17.68■□□□□ 0.42
COL7A1-207ENST00000467985 A0A1W2PR48 441 aa17.67■□□□□ 0.42
COL7A1-207ENST00000467985 ACOT7O00154 380 aa17.67■□□□□ 0.42
COL7A1-207ENST00000467985 TAC1P20366 129 aa17.67■□□□□ 0.42
COL7A1-207ENST00000467985 PTGER1P34995 402 aa17.67■□□□□ 0.42
COL7A1-207ENST00000467985 RFC3P40938 356 aa17.67■□□□□ 0.42
COL7A1-207ENST00000467985 HSF1Q00613 529 aa17.67■□□□□ 0.42
COL7A1-207ENST00000467985 SPRED3Q2MJR0 410 aa17.67■□□□□ 0.42
COL7A1-207ENST00000467985 CMPK2Q5EBM0 449 aa17.67■□□□□ 0.42
COL7A1-207ENST00000467985 PIGGQ5H8A4 983 aa17.67■□□□□ 0.42
COL7A1-207ENST00000467985 SP5Q6BEB4 398 aaPredicted RBP17.67■□□□□ 0.42
COL7A1-207ENST00000467985 OR52E8Q6IFG1 317 aa17.67■□□□□ 0.42
COL7A1-207ENST00000467985 PAOXQ6QHF9 649 aa17.67■□□□□ 0.42
COL7A1-207ENST00000467985 GK5Q6ZS86 529 aa17.67■□□□□ 0.42
COL7A1-207ENST00000467985 CHERPQ8IWX8 916 aaKnown RBP17.67■□□□□ 0.42
COL7A1-207ENST00000467985 DND1Q8IYX4 353 aaKnown RBP17.67■□□□□ 0.42
COL7A1-207ENST00000467985 SLC22A8Q8TCC7 542 aa17.67■□□□□ 0.42
COL7A1-207ENST00000467985 AGAP11Q8TF27 550 aa17.67■□□□□ 0.42
COL7A1-207ENST00000467985 ZNF483Q8TF39 744 aaPredicted RBP17.67■□□□□ 0.42
COL7A1-207ENST00000467985 AENQ8WTP8 325 aaKnown RBP17.67■□□□□ 0.42
COL7A1-207ENST00000467985 PPWD1Q96BP3 646 aaKnown RBP17.67■□□□□ 0.42
COL7A1-207ENST00000467985 NSUN5Q96P11 429 aaKnown RBP17.67■□□□□ 0.42
COL7A1-207ENST00000467985 FAM173AQ9BQD7 235 aa17.67■□□□□ 0.42
COL7A1-207ENST00000467985 CHST11Q9NPF2 352 aa17.67■□□□□ 0.42
COL7A1-207ENST00000467985 CACNA1DQ01668 2161 aa17.67■□□□□ 0.42
COL7A1-207ENST00000467985 IQANK1A0A1B0GTG1 560 aa17.66■□□□□ 0.42
COL7A1-207ENST00000467985 ARHGAP10A1A4S6 786 aa17.66■□□□□ 0.42
COL7A1-207ENST00000467985 OR6C76A6NM76 312 aa17.66■□□□□ 0.42
COL7A1-207ENST00000467985 A8MT66 165 aa17.66■□□□□ 0.42
COL7A1-207ENST00000467985 E9PLN8 166 aa17.66■□□□□ 0.42
COL7A1-207ENST00000467985 RIPK2O43353 540 aa17.66■□□□□ 0.42
COL7A1-207ENST00000467985 HS6ST1O60243 411 aa17.66■□□□□ 0.42
COL7A1-207ENST00000467985 AIFM1O95831 613 aa17.66■□□□□ 0.42
COL7A1-207ENST00000467985 SLC35E2P0CK97 266 aa17.66■□□□□ 0.42
COL7A1-207ENST00000467985 PTGS2P35354 604 aa17.66■□□□□ 0.42
COL7A1-207ENST00000467985 PLGLB1Q02325 96 aa17.66■□□□□ 0.42
COL7A1-207ENST00000467985 TBL3Q12788 808 aaKnown RBP17.66■□□□□ 0.42
COL7A1-207ENST00000467985 NDUFAF5Q5TEU4 345 aa17.66■□□□□ 0.42
COL7A1-207ENST00000467985 ARHGAP11AQ6P4F7 1023 aa17.66■□□□□ 0.42
COL7A1-207ENST00000467985 SLC29A4Q7RTT9 530 aa17.66■□□□□ 0.42
COL7A1-207ENST00000467985 SLC22A16Q86VW1 577 aa17.66■□□□□ 0.42
COL7A1-207ENST00000467985 DOLPP1Q86YN1 238 aa17.66■□□□□ 0.42
COL7A1-207ENST00000467985 C9orf40Q8IXQ3 194 aa17.66■□□□□ 0.42
COL7A1-207ENST00000467985 OR2M7Q8NG81 312 aa17.66■□□□□ 0.42
COL7A1-207ENST00000467985 OR4F6Q8NGB9 312 aa17.66■□□□□ 0.42
COL7A1-207ENST00000467985 PHF10Q8WUB8 498 aaKnown RBP17.66■□□□□ 0.42
COL7A1-207ENST00000467985 RIT1Q92963 219 aa17.66■□□□□ 0.42
COL7A1-207ENST00000467985 CAVIN3Q969G5 261 aa17.66■□□□□ 0.42
COL7A1-207ENST00000467985 VKORC1Q9BQB6 163 aa17.66■□□□□ 0.42
COL7A1-207ENST00000467985 CNPPD1Q9BV87 410 aa17.66■□□□□ 0.42
COL7A1-207ENST00000467985 PLSCR2Q9NRY7 297 aa17.66■□□□□ 0.42
COL7A1-207ENST00000467985 SACM1LQ9NTJ5 587 aa17.66■□□□□ 0.42
COL7A1-207ENST00000467985 DEPPQ9NTK1 212 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms