RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 NDRG2Q9UN36 371 aaKnown RBP12.35□□□□□ -0.43
PDZRN3-205ENST00000466780 GPSM3Q9Y4H4 160 aa12.35□□□□□ -0.43
PDZRN3-205ENST00000466780 CPNE3O75131 537 aaKnown RBP12.34□□□□□ -0.43
PDZRN3-205ENST00000466780 OLFM2O95897 454 aa12.34□□□□□ -0.43
PDZRN3-205ENST00000466780 BCHEP06276 602 aa12.34□□□□□ -0.43
PDZRN3-205ENST00000466780 KLK1P06870 262 aa12.34□□□□□ -0.43
PDZRN3-205ENST00000466780 HLA-DMAP28067 261 aa12.34□□□□□ -0.43
PDZRN3-205ENST00000466780 GSTM5P46439 218 aa12.34□□□□□ -0.43
PDZRN3-205ENST00000466780 MEF2AQ02078 507 aaPredicted RBP12.34□□□□□ -0.43
PDZRN3-205ENST00000466780 ZNF628Q5EBL2 1059 aa12.34□□□□□ -0.43
PDZRN3-205ENST00000466780 ATAT1Q5SQI0 421 aa12.34□□□□□ -0.43
PDZRN3-205ENST00000466780 DCST1Q5T197 706 aa12.34□□□□□ -0.43
PDZRN3-205ENST00000466780 TNFAIP8L2Q6P589 184 aaPredicted RBP12.34□□□□□ -0.43
PDZRN3-205ENST00000466780 TCTE3Q8IZS6 198 aa12.34□□□□□ -0.43
PDZRN3-205ENST00000466780 CRIPAKQ8N1N5 446 aa12.34□□□□□ -0.43
PDZRN3-205ENST00000466780 ZFAND1Q8TCF1 268 aa12.34□□□□□ -0.43
PDZRN3-205ENST00000466780 ZNF480Q8WV37 535 aa12.34□□□□□ -0.43
PDZRN3-205ENST00000466780 TMEM159Q96B96 161 aa12.34□□□□□ -0.43
PDZRN3-205ENST00000466780 KATNB1Q9BVA0 655 aa12.34□□□□□ -0.43
PDZRN3-205ENST00000466780 SLC6A16Q9GZN6 736 aa12.34□□□□□ -0.43
PDZRN3-205ENST00000466780 IRF2BPLQ9H1B7 796 aa12.34□□□□□ -0.43
PDZRN3-205ENST00000466780 TVP23BQ9NYZ1 205 aa12.34□□□□□ -0.43
PDZRN3-205ENST00000466780 TAAR2Q9P1P5 351 aa12.34□□□□□ -0.43
PDZRN3-205ENST00000466780 HCN2Q9UL51 889 aa12.34□□□□□ -0.43
PDZRN3-205ENST00000466780 DIMT1Q9UNQ2 313 aaKnown RBP12.34□□□□□ -0.43
PDZRN3-205ENST00000466780 CARD8Q9Y2G2 431 aa12.34□□□□□ -0.43
PDZRN3-205ENST00000466780 SLC5A10A0PJK1 596 aa12.34□□□□□ -0.43
PDZRN3-205ENST00000466780 FOXE1O00358 373 aaPredicted RBP12.34□□□□□ -0.43
PDZRN3-205ENST00000466780 TLX2O43763 284 aaPredicted RBP12.34□□□□□ -0.43
PDZRN3-205ENST00000466780 IL3P08700 152 aa12.34□□□□□ -0.43
PDZRN3-205ENST00000466780 CTSAP10619 480 aa12.34□□□□□ -0.43
PDZRN3-205ENST00000466780 NPPBP16860 134 aa12.34□□□□□ -0.43
PDZRN3-205ENST00000466780 TNNI3P19429 210 aa12.34□□□□□ -0.43
PDZRN3-205ENST00000466780 APEX1P27695 318 aaKnown RBP12.34□□□□□ -0.43
PDZRN3-205ENST00000466780 SLC9A3P48764 834 aa12.34□□□□□ -0.43
PDZRN3-205ENST00000466780 CAV3P56539 151 aa12.34□□□□□ -0.43
PDZRN3-205ENST00000466780 TBPL1P62380 186 aa12.34□□□□□ -0.43
PDZRN3-205ENST00000466780 RPS25P62851 125 aaKnown RBP12.34□□□□□ -0.43
PDZRN3-205ENST00000466780 BNC1Q01954 994 aa12.34□□□□□ -0.43
PDZRN3-205ENST00000466780 FAPQ12884 760 aa12.34□□□□□ -0.43
PDZRN3-205ENST00000466780 QPRTQ15274 297 aa12.34□□□□□ -0.43
PDZRN3-205ENST00000466780 DDI2Q5TDH0 399 aa12.34□□□□□ -0.43
PDZRN3-205ENST00000466780 SYCE2Q6PIF2 218 aa12.34□□□□□ -0.43
PDZRN3-205ENST00000466780 HSDL2Q6YN16 418 aa12.34□□□□□ -0.43
PDZRN3-205ENST00000466780 DDX53Q86TM3 631 aaKnown RBP12.34□□□□□ -0.43
PDZRN3-205ENST00000466780 LIX1LQ8IVB5 337 aa12.34□□□□□ -0.43
PDZRN3-205ENST00000466780 RASGEF1AQ8N9B8 481 aa12.34□□□□□ -0.43
PDZRN3-205ENST00000466780 IL17RCQ8NAC3 791 aa12.34□□□□□ -0.43
PDZRN3-205ENST00000466780 ATP6V1C2Q8NEY4 427 aa12.34□□□□□ -0.43
PDZRN3-205ENST00000466780 TM9SF4Q92544 642 aa12.34□□□□□ -0.43
PDZRN3-205ENST00000466780 LMLNQ96KR4 655 aa12.34□□□□□ -0.43
PDZRN3-205ENST00000466780 NECTIN4Q96NY8 510 aa12.34□□□□□ -0.43
PDZRN3-205ENST00000466780 FUZQ9BT04 418 aa12.34□□□□□ -0.43
PDZRN3-205ENST00000466780 SORBS1Q9BX66 1292 aaKnown RBP12.34□□□□□ -0.43
PDZRN3-205ENST00000466780 CPEB1Q9BZB8 566 aaKnown RBP12.34□□□□□ -0.43
PDZRN3-205ENST00000466780 GPBP1L1Q9HC44 474 aaPredicted RBP12.34□□□□□ -0.43
PDZRN3-205ENST00000466780 TESQ9UGI8 421 aaKnown RBP12.34□□□□□ -0.43
PDZRN3-205ENST00000466780 SPIN1Q9Y657 262 aaPredicted RBP12.34□□□□□ -0.43
PDZRN3-205ENST00000466780 PIPSLA2A3N6 862 aa12.33□□□□□ -0.44
PDZRN3-205ENST00000466780 FAAHO00519 579 aa12.33□□□□□ -0.44
PDZRN3-205ENST00000466780 CCNYL3P0C7X3 344 aa12.33□□□□□ -0.44
PDZRN3-205ENST00000466780 ALAS2P22557 587 aa12.33□□□□□ -0.44
PDZRN3-205ENST00000466780 ETV3P41162 512 aa12.33□□□□□ -0.44
PDZRN3-205ENST00000466780 MAN2A2P49641 1150 aa12.33□□□□□ -0.44
PDZRN3-205ENST00000466780 ATN1P54259 1190 aaPredicted RBP12.33□□□□□ -0.44
PDZRN3-205ENST00000466780 GAS1P54826 345 aa12.33□□□□□ -0.44
PDZRN3-205ENST00000466780 P2RX3P56373 397 aa12.33□□□□□ -0.44
PDZRN3-205ENST00000466780 TSTA3Q13630 321 aaPredicted RBP12.33□□□□□ -0.44
PDZRN3-205ENST00000466780 GPR19Q15760 415 aa12.33□□□□□ -0.44
PDZRN3-205ENST00000466780 TATDN3Q17R31 274 aa12.33□□□□□ -0.44
PDZRN3-205ENST00000466780 MPPE1Q53F39 396 aa12.33□□□□□ -0.44
PDZRN3-205ENST00000466780 SYT14P1Q58G82 188 aa12.33□□□□□ -0.44
PDZRN3-205ENST00000466780 OR2G6Q5TZ20 316 aa12.33□□□□□ -0.44
PDZRN3-205ENST00000466780 DEF8Q6ZN54 512 aa12.33□□□□□ -0.44
PDZRN3-205ENST00000466780 FAM92BQ6ZTR7 304 aa12.33□□□□□ -0.44
PDZRN3-205ENST00000466780 PDZD3Q86UT5 571 aa12.33□□□□□ -0.44
PDZRN3-205ENST00000466780 TP53I13Q8NBR0 393 aaPredicted RBP12.33□□□□□ -0.44
PDZRN3-205ENST00000466780 ENKURQ8TC29 256 aa12.33□□□□□ -0.44
PDZRN3-205ENST00000466780 TRIM63Q969Q1 353 aa12.33□□□□□ -0.44
PDZRN3-205ENST00000466780 TMEM169Q96HH4 297 aa12.33□□□□□ -0.44
PDZRN3-205ENST00000466780 TMEM19Q96HH6 336 aa12.33□□□□□ -0.44
PDZRN3-205ENST00000466780 RIOK2Q9BVS4 552 aaKnown RBP12.33□□□□□ -0.44
PDZRN3-205ENST00000466780 GON7Q9BXV9 100 aa12.33□□□□□ -0.44
PDZRN3-205ENST00000466780 MVB12BQ9H7P6 319 aa12.33□□□□□ -0.44
PDZRN3-205ENST00000466780 IL21Q9HBE4 155 aa12.33□□□□□ -0.44
PDZRN3-205ENST00000466780 HS3ST2Q9Y278 367 aa12.33□□□□□ -0.44
PDZRN3-205ENST00000466780 SF3B6Q9Y3B4 125 aaKnown RBP12.33□□□□□ -0.44
PDZRN3-205ENST00000466780 ZNF780AO75290 641 aaPredicted RBP12.33□□□□□ -0.44
PDZRN3-205ENST00000466780 H1F0P07305 194 aaKnown RBP12.33□□□□□ -0.44
PDZRN3-205ENST00000466780 UQCRC2P22695 453 aa12.33□□□□□ -0.44
PDZRN3-205ENST00000466780 CPN2P22792 545 aa12.33□□□□□ -0.44
PDZRN3-205ENST00000466780 HLA-FP30511 346 aa12.33□□□□□ -0.44
PDZRN3-205ENST00000466780 RPL3P39023 403 aaKnown RBP12.33□□□□□ -0.44
PDZRN3-205ENST00000466780 HTR2BP41595 481 aa12.33□□□□□ -0.44
PDZRN3-205ENST00000466780 DGKGP49619 791 aa12.33□□□□□ -0.44
PDZRN3-205ENST00000466780 TARDBPQ13148 414 aaKnown RBP eCLIP12.33□□□□□ -0.44
PDZRN3-205ENST00000466780 CMTM8Q8IZV2 173 aa12.33□□□□□ -0.44
PDZRN3-205ENST00000466780 FAM26EQ8N5C1 309 aa12.33□□□□□ -0.44
PDZRN3-205ENST00000466780 SLC7A13Q8TCU3 470 aa12.33□□□□□ -0.44
PDZRN3-205ENST00000466780 FGF11Q92914 225 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms