RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-223	ENST00000465278	SLC51B	Q86UW2	128 aa		4.65	□□□□□ -1.67
CACNA1C-223	ENST00000465278	C12orf56	Q8IXR9	622 aa		4.65	□□□□□ -1.67
CACNA1C-223	ENST00000465278	SYCP3	Q8IZU3	236 aa		4.65	□□□□□ -1.67
CACNA1C-223	ENST00000465278	MUC20	Q8N307	709 aa	Predicted RBP	4.65	□□□□□ -1.67
CACNA1C-223	ENST00000465278	LSMEM1	Q8N8F7	131 aa		4.65	□□□□□ -1.67
CACNA1C-223	ENST00000465278	OR13A1	Q8NGR1	328 aa		4.65	□□□□□ -1.67
CACNA1C-223	ENST00000465278	WDR20	Q8TBZ3	569 aa		4.65	□□□□□ -1.67
CACNA1C-223	ENST00000465278	TAS1R2	Q8TE23	839 aa		4.65	□□□□□ -1.67
CACNA1C-223	ENST00000465278	DQX1	Q8TE96	717 aa	Known RBP	4.65	□□□□□ -1.67
CACNA1C-223	ENST00000465278	PPP4R1	Q8TF05	950 aa		4.65	□□□□□ -1.67
CACNA1C-223	ENST00000465278	LRRC15	Q8TF66	581 aa		4.65	□□□□□ -1.67
CACNA1C-223	ENST00000465278	PTPMT1	Q8WUK0	201 aa	Predicted RBP	4.65	□□□□□ -1.67
CACNA1C-223	ENST00000465278	TMEM255B	Q8WV15	326 aa		4.65	□□□□□ -1.67
CACNA1C-223	ENST00000465278	SECTM1	Q8WVN6	248 aa		4.65	□□□□□ -1.67
CACNA1C-223	ENST00000465278	FGF13	Q92913	245 aa		4.65	□□□□□ -1.67
CACNA1C-223	ENST00000465278	ERLEC1	Q96DZ1	483 aa		4.65	□□□□□ -1.67
CACNA1C-223	ENST00000465278	MSANTD3	Q96H12	275 aa		4.65	□□□□□ -1.67
CACNA1C-223	ENST00000465278	SPATA17	Q96L03	361 aa		4.65	□□□□□ -1.67
CACNA1C-223	ENST00000465278	COQ7	Q99807	217 aa		4.65	□□□□□ -1.67
CACNA1C-223	ENST00000465278	NEURL2	Q9BR09	285 aa		4.65	□□□□□ -1.67
CACNA1C-223	ENST00000465278	FTHL17	Q9BXU8	183 aa		4.65	□□□□□ -1.67
CACNA1C-223	ENST00000465278	PLA2G2F	Q9BZM2	168 aa		4.65	□□□□□ -1.67
CACNA1C-223	ENST00000465278	DRC3	Q9H069	523 aa		4.65	□□□□□ -1.67
CACNA1C-223	ENST00000465278	CUEDC2	Q9H467	287 aa		4.65	□□□□□ -1.67
CACNA1C-223	ENST00000465278	HAUS4	Q9H6D7	363 aa		4.65	□□□□□ -1.67
CACNA1C-223	ENST00000465278	EVA1A	Q9H8M9	152 aa		4.65	□□□□□ -1.67
CACNA1C-223	ENST00000465278	EBF2	Q9HAK2	575 aa		4.65	□□□□□ -1.67
CACNA1C-223	ENST00000465278	VAT1L	Q9HCJ6	419 aa		4.65	□□□□□ -1.67
CACNA1C-223	ENST00000465278	ATAD3A	Q9NVI7	634 aa		4.65	□□□□□ -1.67
CACNA1C-223	ENST00000465278	MARCH4	Q9P2E8	410 aa	Predicted RBP	4.65	□□□□□ -1.67
CACNA1C-223	ENST00000465278	AMACR	Q9UHK6	382 aa		4.65	□□□□□ -1.67
CACNA1C-223	ENST00000465278	HOOK1	Q9UJC3	728 aa	Known RBP	4.65	□□□□□ -1.67
CACNA1C-223	ENST00000465278	KIAA1257	Q9ULG3	409 aa		4.65	□□□□□ -1.67
CACNA1C-223	ENST00000465278	PPIE	Q9UNP9	301 aa	Known RBP	4.65	□□□□□ -1.67
CACNA1C-223	ENST00000465278	YIPF1	Q9Y548	306 aa		4.65	□□□□□ -1.67
CACNA1C-223	ENST00000465278	FAM169A	Q9Y6X4	670 aa		4.65	□□□□□ -1.67
CACNA1C-223	ENST00000465278	ABCB11	O95342	1321 aa		4.65	□□□□□ -1.67
CACNA1C-223	ENST00000465278	NUP210	Q8TEM1	1887 aa	Predicted RBP	4.64	□□□□□ -1.67
CACNA1C-223	ENST00000465278	C5orf60	A6NFR6	353 aa		4.64	□□□□□ -1.67
CACNA1C-223	ENST00000465278	CCDC169	A6NNP5	214 aa		4.64	□□□□□ -1.67
CACNA1C-223	ENST00000465278	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	4.64	□□□□□ -1.67
CACNA1C-223	ENST00000465278	GOLGA8R	I6L899	631 aa		4.64	□□□□□ -1.67
CACNA1C-223	ENST00000465278	SLC37A4	O43826	429 aa		4.64	□□□□□ -1.67
CACNA1C-223	ENST00000465278	TFAP2A	P05549	437 aa		4.64	□□□□□ -1.67
CACNA1C-223	ENST00000465278	GSTA2	P09210	222 aa		4.64	□□□□□ -1.67
CACNA1C-223	ENST00000465278	OR52Z1	P0C646	297 aa		4.64	□□□□□ -1.67
CACNA1C-223	ENST00000465278	GJA1	P17302	382 aa		4.64	□□□□□ -1.67
CACNA1C-223	ENST00000465278	GM2A	P17900	193 aa		4.64	□□□□□ -1.67
CACNA1C-223	ENST00000465278	ALDH3A1	P30838	453 aa		4.64	□□□□□ -1.67
CACNA1C-223	ENST00000465278	PLTP	P55058	493 aa		4.64	□□□□□ -1.67
CACNA1C-223	ENST00000465278	MTTP	P55157	894 aa		4.64	□□□□□ -1.67
CACNA1C-223	ENST00000465278	CDH13	P55290	713 aa		4.64	□□□□□ -1.67
CACNA1C-223	ENST00000465278	ERVFC1-1	P60608	527 aa		4.64	□□□□□ -1.67
CACNA1C-223	ENST00000465278	SNRPE	P62304	92 aa	Known RBP	4.64	□□□□□ -1.67
CACNA1C-223	ENST00000465278	MGAT3	Q09327	533 aa		4.64	□□□□□ -1.67
CACNA1C-223	ENST00000465278	KLHL30	Q0D2K2	578 aa		4.64	□□□□□ -1.67
CACNA1C-223	ENST00000465278	PRKAA1	Q13131	559 aa		4.64	□□□□□ -1.67
CACNA1C-223	ENST00000465278	DNAJC3	Q13217	504 aa		4.64	□□□□□ -1.67
CACNA1C-223	ENST00000465278	CYLC2	Q14093	348 aa	Predicted RBP	4.64	□□□□□ -1.67
CACNA1C-223	ENST00000465278	MELK	Q14680	651 aa		4.64	□□□□□ -1.67
CACNA1C-223	ENST00000465278	DUOXA1	Q1HG43	343 aa		4.64	□□□□□ -1.67
CACNA1C-223	ENST00000465278	ANKDD1A	Q495B1	522 aa		4.64	□□□□□ -1.67
CACNA1C-223	ENST00000465278	KRT79	Q5XKE5	535 aa		4.64	□□□□□ -1.67
CACNA1C-223	ENST00000465278	KLC3	Q6P597	504 aa		4.64	□□□□□ -1.67
CACNA1C-223	ENST00000465278	TEX38	Q6PEX7	206 aa		4.64	□□□□□ -1.67
CACNA1C-223	ENST00000465278	PLXDC2	Q6UX71	529 aa		4.64	□□□□□ -1.67
CACNA1C-223	ENST00000465278	ZNF704	Q6ZNC4	412 aa	Predicted RBP	4.64	□□□□□ -1.67
CACNA1C-223	ENST00000465278	KCTD8	Q6ZWB6	473 aa		4.64	□□□□□ -1.67
CACNA1C-223	ENST00000465278	NIPA1	Q7RTP0	329 aa		4.64	□□□□□ -1.67
CACNA1C-223	ENST00000465278	HAUS6	Q7Z4H7	955 aa		4.64	□□□□□ -1.67
CACNA1C-223	ENST00000465278	EXOC3L1	Q86VI1	746 aa		4.64	□□□□□ -1.67
CACNA1C-223	ENST00000465278	TBC1D21	Q8IYX1	336 aa		4.64	□□□□□ -1.67
CACNA1C-223	ENST00000465278	KCTD6	Q8NC69	237 aa		4.64	□□□□□ -1.67
CACNA1C-223	ENST00000465278	OR52K1	Q8NGK4	314 aa		4.64	□□□□□ -1.67
CACNA1C-223	ENST00000465278	CFAP61	Q8NHU2	1237 aa		4.64	□□□□□ -1.67
CACNA1C-223	ENST00000465278	P3H4	Q92791	437 aa		4.64	□□□□□ -1.67
CACNA1C-223	ENST00000465278	EFHD2	Q96C19	240 aa	Predicted RBP	4.64	□□□□□ -1.67
CACNA1C-223	ENST00000465278	ZNF582	Q96NG8	517 aa	Predicted RBP	4.64	□□□□□ -1.67
CACNA1C-223	ENST00000465278	RPRD1A	Q96P16	312 aa	Predicted RBP	4.64	□□□□□ -1.67
CACNA1C-223	ENST00000465278	SECISBP2	Q96T21	854 aa	Known RBP	4.64	□□□□□ -1.67
CACNA1C-223	ENST00000465278	PKP4	Q99569	1192 aa		4.64	□□□□□ -1.67
CACNA1C-223	ENST00000465278	HSD3B7	Q9H2F3	369 aa		4.64	□□□□□ -1.67
CACNA1C-223	ENST00000465278	TMEM245	Q9H330	911 aa		4.64	□□□□□ -1.67
CACNA1C-223	ENST00000465278	DENND2D	Q9H6A0	471 aa	Predicted RBP	4.64	□□□□□ -1.67
CACNA1C-223	ENST00000465278	MAGEF1	Q9HAY2	307 aa		4.64	□□□□□ -1.67
CACNA1C-223	ENST00000465278	EXTL2	Q9UBQ6	330 aa		4.64	□□□□□ -1.67
CACNA1C-223	ENST00000465278	ZNF580	Q9UK33	172 aa		4.64	□□□□□ -1.67
CACNA1C-223	ENST00000465278	PILRB	Q9UKJ0	227 aa		4.64	□□□□□ -1.67
CACNA1C-223	ENST00000465278	ENTPD4	Q9Y227	616 aa		4.64	□□□□□ -1.67
CACNA1C-223	ENST00000465278	ASB3	Q9Y575	518 aa		4.64	□□□□□ -1.67
CACNA1C-223	ENST00000465278	ARID2	Q68CP9	1835 aa		4.64	□□□□□ -1.67
CACNA1C-223	ENST00000465278	PRRC2C	Q9Y520	2896 aa	Known RBP	4.64	□□□□□ -1.67
CACNA1C-223	ENST00000465278	LOC100509620	A0A075B734	347 aa		4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	MACROD2	A1Z1Q3	448 aa		4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	SYNDIG1L	A6NDD5	238 aa		4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	FAM86B1	E9PN63	330 aa		4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278		L7N2F9	121 aa		4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	AP3B1	O00203	1094 aa		4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	RTCA	O00442	366 aa	Known RBP	4.63	□□□□□ -1.67
CACNA1C-223	ENST00000465278	IKBKB	O14920	756 aa		4.63	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms