RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 ALDH3B1P43353 468 aa4.54□□□□□ -1.68
PTCD3-205ENST00000464541 SLC12A3P55017 1021 aa4.54□□□□□ -1.68
PTCD3-205ENST00000464541 ITPK1Q13572 414 aa4.54□□□□□ -1.68
PTCD3-205ENST00000464541 CYLC2Q14093 348 aaPredicted RBP4.54□□□□□ -1.68
PTCD3-205ENST00000464541 LINC00242Q5T6M2 205 aa4.54□□□□□ -1.68
PTCD3-205ENST00000464541 VITQ6UXI7 678 aa4.54□□□□□ -1.68
PTCD3-205ENST00000464541 KCTD9Q7L273 389 aa4.54□□□□□ -1.68
PTCD3-205ENST00000464541 FBXL16Q8N461 479 aa4.54□□□□□ -1.68
PTCD3-205ENST00000464541 SIDT2Q8NBJ9 832 aaKnown RBP4.54□□□□□ -1.68
PTCD3-205ENST00000464541 OR1K1Q8NGR3 316 aa4.54□□□□□ -1.68
PTCD3-205ENST00000464541 HAS2Q92819 552 aa4.54□□□□□ -1.68
PTCD3-205ENST00000464541 MRPL24Q96A35 216 aaKnown RBP4.54□□□□□ -1.68
PTCD3-205ENST00000464541 EPSTI1Q96J88 318 aa4.54□□□□□ -1.68
PTCD3-205ENST00000464541 APOL2Q9BQE5 337 aa4.54□□□□□ -1.68
PTCD3-205ENST00000464541 CACNG6Q9BXT2 260 aa4.54□□□□□ -1.68
PTCD3-205ENST00000464541 AKIRIN1Q9H9L7 192 aaPredicted RBP4.54□□□□□ -1.68
PTCD3-205ENST00000464541 TRPC4Q9UBN4 977 aa4.54□□□□□ -1.68
PTCD3-205ENST00000464541 ZNF346Q9UL40 294 aaKnown RBP4.54□□□□□ -1.68
PTCD3-205ENST00000464541 LRRD1A4D1F6 860 aa4.53□□□□□ -1.68
PTCD3-205ENST00000464541 SLC15A5A6NIM6 579 aa4.53□□□□□ -1.68
PTCD3-205ENST00000464541 CACNB4O00305 520 aaPredicted RBP4.53□□□□□ -1.68
PTCD3-205ENST00000464541 KBTBD11O94819 623 aa4.53□□□□□ -1.68
PTCD3-205ENST00000464541 IGKV3-15P01624 115 aa4.53□□□□□ -1.68
PTCD3-205ENST00000464541 OAS2P29728 719 aaKnown RBP4.53□□□□□ -1.68
PTCD3-205ENST00000464541 STIP1P31948 543 aaKnown RBP4.53□□□□□ -1.68
PTCD3-205ENST00000464541 SERPINH1P50454 418 aaKnown RBP4.53□□□□□ -1.68
PTCD3-205ENST00000464541 KCNK10P57789 538 aa4.53□□□□□ -1.68
PTCD3-205ENST00000464541 PPIAP62937 165 aaKnown RBP4.53□□□□□ -1.68
PTCD3-205ENST00000464541 GSTO1P78417 241 aa4.53□□□□□ -1.68
PTCD3-205ENST00000464541 CDKL1Q00532 357 aa4.53□□□□□ -1.68
PTCD3-205ENST00000464541 GIT2Q14161 759 aa4.53□□□□□ -1.68
PTCD3-205ENST00000464541 HEPACAMQ14CZ8 416 aa4.53□□□□□ -1.68
PTCD3-205ENST00000464541 MORF4L2Q15014 288 aa4.53□□□□□ -1.68
PTCD3-205ENST00000464541 STX1AQ16623 288 aa4.53□□□□□ -1.68
PTCD3-205ENST00000464541 Q1RN00 199 aa4.53□□□□□ -1.68
PTCD3-205ENST00000464541 DDI2Q5TDH0 399 aa4.53□□□□□ -1.68
PTCD3-205ENST00000464541 RFWD3Q6PCD5 774 aa4.53□□□□□ -1.68
PTCD3-205ENST00000464541 CCDC71Q8IV32 467 aaPredicted RBP4.53□□□□□ -1.68
PTCD3-205ENST00000464541 RHOXF1Q8NHV9 184 aa4.53□□□□□ -1.68
PTCD3-205ENST00000464541 KIAA1524Q8TCG1 905 aa4.53□□□□□ -1.68
PTCD3-205ENST00000464541 C16orf58Q96GQ5 468 aa4.53□□□□□ -1.68
PTCD3-205ENST00000464541 RBM18Q96H35 190 aaKnown RBP4.53□□□□□ -1.68
PTCD3-205ENST00000464541 CIDEBQ9UHD4 219 aa4.53□□□□□ -1.68
PTCD3-205ENST00000464541 MAD2L2Q9UI95 211 aa4.53□□□□□ -1.68
PTCD3-205ENST00000464541 EXOC7Q9UPT5 735 aa4.53□□□□□ -1.68
PTCD3-205ENST00000464541 FOXA2Q9Y261 457 aaPredicted RBP4.53□□□□□ -1.68
PTCD3-205ENST00000464541 FGD5Q6ZNL6 1462 aa4.53□□□□□ -1.68
PTCD3-205ENST00000464541 GON4LQ3T8J9 2241 aa4.53□□□□□ -1.68
PTCD3-205ENST00000464541 ANXA9O76027 345 aa4.52□□□□□ -1.69
PTCD3-205ENST00000464541 ID1P41134 155 aa4.52□□□□□ -1.69
PTCD3-205ENST00000464541 RGS19P49795 217 aa4.52□□□□□ -1.69
PTCD3-205ENST00000464541 SMU1Q2TAY7 513 aa4.52□□□□□ -1.69
PTCD3-205ENST00000464541 CASC1Q6TDU7 716 aa4.52□□□□□ -1.69
PTCD3-205ENST00000464541 Q6ZRG5 221 aa4.52□□□□□ -1.69
PTCD3-205ENST00000464541 PRSS42Q7Z5A4 293 aa4.52□□□□□ -1.69
PTCD3-205ENST00000464541 SNX32Q86XE0 403 aa4.52□□□□□ -1.69
PTCD3-205ENST00000464541 HSCBQ8IWL3 235 aa4.52□□□□□ -1.69
PTCD3-205ENST00000464541 RSPH1Q8WYR4 309 aa4.52□□□□□ -1.69
PTCD3-205ENST00000464541 NTNG2Q96CW9 530 aa4.52□□□□□ -1.69
PTCD3-205ENST00000464541 VMP1Q96GC9 406 aa4.52□□□□□ -1.69
PTCD3-205ENST00000464541 AMBNQ9NP70 447 aa4.52□□□□□ -1.69
PTCD3-205ENST00000464541 TECRQ9NZ01 308 aaKnown RBP4.52□□□□□ -1.69
PTCD3-205ENST00000464541 SENP1Q9P0U3 644 aa4.52□□□□□ -1.69
PTCD3-205ENST00000464541 A0A0A6YYC8 382 aaPredicted RBP4.51□□□□□ -1.69
PTCD3-205ENST00000464541 I3L1I5 382 aaPredicted RBP4.51□□□□□ -1.69
PTCD3-205ENST00000464541 DUSP11O75319 330 aaKnown RBP4.51□□□□□ -1.69
PTCD3-205ENST00000464541 STBD1O95210 358 aa4.51□□□□□ -1.69
PTCD3-205ENST00000464541 BAG2O95816 211 aa4.51□□□□□ -1.69
PTCD3-205ENST00000464541 CALCAP01258 141 aa4.51□□□□□ -1.69
PTCD3-205ENST00000464541 FCGR3AP08637 254 aa4.51□□□□□ -1.69
PTCD3-205ENST00000464541 MMP10P09238 476 aa4.51□□□□□ -1.69
PTCD3-205ENST00000464541 SBK2P0C263 348 aa4.51□□□□□ -1.69
PTCD3-205ENST00000464541 CCDC159P0C7I6 412 aa4.51□□□□□ -1.69
PTCD3-205ENST00000464541 PPP2R1BP30154 601 aa4.51□□□□□ -1.69
PTCD3-205ENST00000464541 CTNNB1P35222 781 aa4.51□□□□□ -1.69
PTCD3-205ENST00000464541 BRCC3P46736 316 aa4.51□□□□□ -1.69
PTCD3-205ENST00000464541 TRA2BP62995 288 aaKnown RBP4.51□□□□□ -1.69
PTCD3-205ENST00000464541 RUNX3Q13761 415 aa4.51□□□□□ -1.69
PTCD3-205ENST00000464541 RCN2Q14257 317 aa4.51□□□□□ -1.69
PTCD3-205ENST00000464541 EMC2Q15006 297 aa4.51□□□□□ -1.69
PTCD3-205ENST00000464541 ATAD3CQ5T2N8 411 aa4.51□□□□□ -1.69
PTCD3-205ENST00000464541 PRAMEF8Q5VWM4 474 aa4.51□□□□□ -1.69
PTCD3-205ENST00000464541 NAT8LQ8N9F0 302 aa4.51□□□□□ -1.69
PTCD3-205ENST00000464541 OR6M1Q8NGM8 313 aa4.51□□□□□ -1.69
PTCD3-205ENST00000464541 PNPLA2Q96AD5 504 aa4.51□□□□□ -1.69
PTCD3-205ENST00000464541 DDX50Q9BQ39 737 aaKnown RBP4.51□□□□□ -1.69
PTCD3-205ENST00000464541 GANQ9H2C0 597 aa4.51□□□□□ -1.69
PTCD3-205ENST00000464541 GDF3Q9NR23 364 aa4.51□□□□□ -1.69
PTCD3-205ENST00000464541 STX8Q9UNK0 236 aa4.51□□□□□ -1.69
PTCD3-205ENST00000464541 SLC6A5Q9Y345 797 aa4.51□□□□□ -1.69
PTCD3-205ENST00000464541 ABCA7Q8IZY2 2146 aa4.51□□□□□ -1.69
PTCD3-205ENST00000464541 MEI4A8MW99 385 aa4.5□□□□□ -1.69
PTCD3-205ENST00000464541 TSPAN2O60636 221 aa4.5□□□□□ -1.69
PTCD3-205ENST00000464541 VENTXO95231 258 aa4.5□□□□□ -1.69
PTCD3-205ENST00000464541 SERPINF2P08697 491 aa4.5□□□□□ -1.69
PTCD3-205ENST00000464541 EZRP15311 586 aaKnown RBP4.5□□□□□ -1.69
PTCD3-205ENST00000464541 NAAAQ02083 359 aa4.5□□□□□ -1.69
PTCD3-205ENST00000464541 P2RY14Q15391 338 aa4.5□□□□□ -1.69
PTCD3-205ENST00000464541 C17orf58Q2M2W7 97 aa4.5□□□□□ -1.69
PTCD3-205ENST00000464541 WSCD2Q2TBF2 565 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms