RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 HOXA6P31267 233 aa10.95□□□□□ -0.66
TRAPPC3-205ENST00000462715 GGT2P36268 569 aa10.95□□□□□ -0.66
TRAPPC3-205ENST00000462715 RPP38P78345 283 aaKnown RBP10.95□□□□□ -0.66
TRAPPC3-205ENST00000462715 ELOAQ14241 798 aaKnown RBP10.95□□□□□ -0.66
TRAPPC3-205ENST00000462715 SMAD1Q15797 465 aaKnown RBP10.95□□□□□ -0.66
TRAPPC3-205ENST00000462715 SMN1Q16637 294 aaKnown RBP10.95□□□□□ -0.66
TRAPPC3-205ENST00000462715 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.95□□□□□ -0.66
TRAPPC3-205ENST00000462715 ANKRD34AQ69YU3 496 aa10.95□□□□□ -0.66
TRAPPC3-205ENST00000462715 PAMR1Q6UXH9 720 aa10.95□□□□□ -0.66
TRAPPC3-205ENST00000462715 LIPIQ6XZB0 460 aa10.95□□□□□ -0.66
TRAPPC3-205ENST00000462715 CFAP77Q6ZQR2 320 aa10.95□□□□□ -0.66
TRAPPC3-205ENST00000462715 Q6ZVU0 165 aa10.95□□□□□ -0.66
TRAPPC3-205ENST00000462715 ISCA2Q86U28 154 aa10.95□□□□□ -0.66
TRAPPC3-205ENST00000462715 LRRC17Q8N6Y2 441 aa10.95□□□□□ -0.66
TRAPPC3-205ENST00000462715 FAM86B1Q8N7N1 296 aa10.95□□□□□ -0.66
TRAPPC3-205ENST00000462715 C19orf18Q8NEA5 215 aa10.95□□□□□ -0.66
TRAPPC3-205ENST00000462715 SRFBP1Q8NEF9 429 aaKnown RBP10.95□□□□□ -0.66
TRAPPC3-205ENST00000462715 PROKR1Q8TCW9 393 aa10.95□□□□□ -0.66
TRAPPC3-205ENST00000462715 OR8D1Q8WZ84 308 aa10.95□□□□□ -0.66
TRAPPC3-205ENST00000462715 ELMO1Q92556 727 aa10.95□□□□□ -0.66
TRAPPC3-205ENST00000462715 EXOC2Q96KP1 924 aa10.95□□□□□ -0.66
TRAPPC3-205ENST00000462715 CINPQ9BW66 212 aaPredicted RBP10.95□□□□□ -0.66
TRAPPC3-205ENST00000462715 PRRG3Q9BZD7 231 aa10.95□□□□□ -0.66
TRAPPC3-205ENST00000462715 TRIM8Q9BZR9 551 aa10.95□□□□□ -0.66
TRAPPC3-205ENST00000462715 PRSS16Q9NQE7 514 aa10.95□□□□□ -0.66
TRAPPC3-205ENST00000462715 MCUBQ9NWR8 336 aa10.95□□□□□ -0.66
TRAPPC3-205ENST00000462715 C2orf42Q9NWW7 574 aa10.95□□□□□ -0.66
TRAPPC3-205ENST00000462715 SLAMF8Q9P0V8 285 aa10.95□□□□□ -0.66
TRAPPC3-205ENST00000462715 RIMKLBQ9ULI2 386 aa10.95□□□□□ -0.66
TRAPPC3-205ENST00000462715 FCF1Q9Y324 198 aaKnown RBP10.95□□□□□ -0.66
TRAPPC3-205ENST00000462715 NYNRINQ9P2P1 1898 aaKnown RBP10.94□□□□□ -0.66
TRAPPC3-205ENST00000462715 CIB4A0PJX0 185 aa10.94□□□□□ -0.66
TRAPPC3-205ENST00000462715 MFSD2BA6NFX1 497 aa10.94□□□□□ -0.66
TRAPPC3-205ENST00000462715 SGK494L7N484 410 aa10.94□□□□□ -0.66
TRAPPC3-205ENST00000462715 CD160O95971 181 aa10.94□□□□□ -0.66
TRAPPC3-205ENST00000462715 ITGB6P18564 788 aa10.94□□□□□ -0.66
TRAPPC3-205ENST00000462715 ITGALP20701 1170 aa10.94□□□□□ -0.66
TRAPPC3-205ENST00000462715 COL9A1P20849 921 aa10.94□□□□□ -0.66
TRAPPC3-205ENST00000462715 RENBPP51606 427 aa10.94□□□□□ -0.66
TRAPPC3-205ENST00000462715 RHOAP61586 193 aa10.94□□□□□ -0.66
TRAPPC3-205ENST00000462715 SNRPD1P62314 119 aaKnown RBP10.94□□□□□ -0.66
TRAPPC3-205ENST00000462715 CSTF1Q05048 431 aaKnown RBP10.94□□□□□ -0.66
TRAPPC3-205ENST00000462715 LAPTM5Q13571 262 aa10.94□□□□□ -0.66
TRAPPC3-205ENST00000462715 ZNF235Q14590 738 aa10.94□□□□□ -0.66
TRAPPC3-205ENST00000462715 WSCD2Q2TBF2 565 aa10.94□□□□□ -0.66
TRAPPC3-205ENST00000462715 C9orf64Q5T6V5 341 aa10.94□□□□□ -0.66
TRAPPC3-205ENST00000462715 KIAA1211LQ6NV74 962 aa10.94□□□□□ -0.66
TRAPPC3-205ENST00000462715 ZNF549Q6P9A3 640 aa10.94□□□□□ -0.66
TRAPPC3-205ENST00000462715 MACC1Q6ZN28 852 aa10.94□□□□□ -0.66
TRAPPC3-205ENST00000462715 EIF3MQ7L2H7 374 aaKnown RBP10.94□□□□□ -0.66
TRAPPC3-205ENST00000462715 CALHM3Q86XJ0 350 aa10.94□□□□□ -0.66
TRAPPC3-205ENST00000462715 OR8K3Q8NH51 312 aa10.94□□□□□ -0.66
TRAPPC3-205ENST00000462715 HMGB4Q8WW32 186 aa10.94□□□□□ -0.66
TRAPPC3-205ENST00000462715 KIAA1191Q96A73 305 aa10.94□□□□□ -0.66
TRAPPC3-205ENST00000462715 TRMT61AQ96FX7 289 aaKnown RBP10.94□□□□□ -0.66
TRAPPC3-205ENST00000462715 WBP1Q96G27 269 aa10.94□□□□□ -0.66
TRAPPC3-205ENST00000462715 TEX37Q96LM6 180 aa10.94□□□□□ -0.66
TRAPPC3-205ENST00000462715 FAM126AQ9BYI3 521 aaPredicted RBP10.94□□□□□ -0.66
TRAPPC3-205ENST00000462715 TREX1Q9NSU2 369 aa10.94□□□□□ -0.66
TRAPPC3-205ENST00000462715 COQ3Q9NZJ6 369 aa10.94□□□□□ -0.66
TRAPPC3-205ENST00000462715 SH3BP4Q9P0V3 963 aa10.94□□□□□ -0.66
TRAPPC3-205ENST00000462715 CKAP5Q14008 2032 aa10.94□□□□□ -0.66
TRAPPC3-205ENST00000462715 MPTX1A8MV57 137 aa10.94□□□□□ -0.66
TRAPPC3-205ENST00000462715 F5H423 210 aaPredicted RBP10.94□□□□□ -0.66
TRAPPC3-205ENST00000462715 K7ESF4 209 aa10.94□□□□□ -0.66
TRAPPC3-205ENST00000462715 MATN3O15232 486 aa10.94□□□□□ -0.66
TRAPPC3-205ENST00000462715 GATCO43716 136 aaKnown RBP10.94□□□□□ -0.66
TRAPPC3-205ENST00000462715 BNIP3LO60238 219 aa10.94□□□□□ -0.66
TRAPPC3-205ENST00000462715 IGSF6O95976 241 aa10.94□□□□□ -0.66
TRAPPC3-205ENST00000462715 SLC19A1P41440 591 aa10.94□□□□□ -0.66
TRAPPC3-205ENST00000462715 CTBP1Q13363 440 aa10.94□□□□□ -0.66
TRAPPC3-205ENST00000462715 EXOSC2Q13868 293 aaKnown RBP10.94□□□□□ -0.66
TRAPPC3-205ENST00000462715 PFKFB4Q16877 469 aa10.94□□□□□ -0.66
TRAPPC3-205ENST00000462715 ZMAT1Q5H9K5 638 aa10.94□□□□□ -0.66
TRAPPC3-205ENST00000462715 MARC1Q5VT66 337 aa10.94□□□□□ -0.66
TRAPPC3-205ENST00000462715 ZNF776Q68DI1 518 aaPredicted RBP10.94□□□□□ -0.66
TRAPPC3-205ENST00000462715 GALNT5Q7Z7M9 940 aa10.94□□□□□ -0.66
TRAPPC3-205ENST00000462715 ZDHHC21Q8IVQ6 265 aa10.94□□□□□ -0.66
TRAPPC3-205ENST00000462715 DENND6AQ8IWF6 608 aa10.94□□□□□ -0.66
TRAPPC3-205ENST00000462715 LILRB2Q8N423 598 aa10.94□□□□□ -0.66
TRAPPC3-205ENST00000462715 EIF4E3Q8N5X7 224 aaKnown RBP10.94□□□□□ -0.66
TRAPPC3-205ENST00000462715 SLC37A3Q8NCC5 494 aa10.94□□□□□ -0.66
TRAPPC3-205ENST00000462715 OR4F6Q8NGB9 312 aa10.94□□□□□ -0.66
TRAPPC3-205ENST00000462715 OR2AP1Q8NGE2 309 aa10.94□□□□□ -0.66
TRAPPC3-205ENST00000462715 SLC22A8Q8TCC7 542 aa10.94□□□□□ -0.66
TRAPPC3-205ENST00000462715 AP3S1Q92572 193 aa10.94□□□□□ -0.66
TRAPPC3-205ENST00000462715 ATOH1Q92858 354 aaPredicted RBP10.94□□□□□ -0.66
TRAPPC3-205ENST00000462715 RHNO1Q9BSD3 238 aa10.94□□□□□ -0.66
TRAPPC3-205ENST00000462715 MED18Q9BUE0 208 aa10.94□□□□□ -0.66
TRAPPC3-205ENST00000462715 TNKS2Q9H2K2 1166 aa10.94□□□□□ -0.66
TRAPPC3-205ENST00000462715 TFB2MQ9H5Q4 396 aaKnown RBP10.94□□□□□ -0.66
TRAPPC3-205ENST00000462715 RDH8Q9NYR8 311 aa10.94□□□□□ -0.66
TRAPPC3-205ENST00000462715 INVSQ9Y283 1065 aa10.94□□□□□ -0.66
TRAPPC3-205ENST00000462715 NEUROG3Q9Y4Z2 214 aa10.94□□□□□ -0.66
TRAPPC3-205ENST00000462715 PCDHGA6Q9Y5G7 932 aa10.94□□□□□ -0.66
TRAPPC3-205ENST00000462715 KCNMB2Q9Y691 235 aa10.94□□□□□ -0.66
TRAPPC3-205ENST00000462715 CCDC163A0A0D9SF12 145 aa10.93□□□□□ -0.66
TRAPPC3-205ENST00000462715 FAM240BA0A1B0GVZ2 78 aa10.93□□□□□ -0.66
TRAPPC3-205ENST00000462715 A8MVJ9 347 aa10.93□□□□□ -0.66
TRAPPC3-205ENST00000462715 PPP6CO00743 305 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms