RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 PIK3CBP42338 1070 aa14.2□□□□□ -0.14
SKA3-204ENST00000462482 NR0B1P51843 470 aaKnown RBP14.2□□□□□ -0.14
SKA3-204ENST00000462482 IGLV3-21P80748 117 aaPredicted RBP14.2□□□□□ -0.14
SKA3-204ENST00000462482 TNFRSF17Q02223 184 aa14.2□□□□□ -0.14
SKA3-204ENST00000462482 FOLH1Q04609 750 aa14.2□□□□□ -0.14
SKA3-204ENST00000462482 FOXO1Q12778 655 aa14.2□□□□□ -0.14
SKA3-204ENST00000462482 GRHL2Q6ISB3 625 aa14.2□□□□□ -0.14
SKA3-204ENST00000462482 CYP20A1Q6UW02 462 aa14.2□□□□□ -0.14
SKA3-204ENST00000462482 RNF111Q6ZNA4 994 aa14.2□□□□□ -0.14
SKA3-204ENST00000462482 WDR53Q7Z5U6 358 aaPredicted RBP14.2□□□□□ -0.14
SKA3-204ENST00000462482 ST13P4Q8IZP2 240 aaPredicted RBP14.2□□□□□ -0.14
SKA3-204ENST00000462482 TAGAPQ8N103 731 aa14.2□□□□□ -0.14
SKA3-204ENST00000462482 TEX9Q8N6V9 391 aa14.2□□□□□ -0.14
SKA3-204ENST00000462482 PAQR8Q8TEZ7 354 aa14.2□□□□□ -0.14
SKA3-204ENST00000462482 PPWD1Q96BP3 646 aaKnown RBP14.2□□□□□ -0.14
SKA3-204ENST00000462482 JSRP1Q96MG2 331 aaPredicted RBP14.2□□□□□ -0.14
SKA3-204ENST00000462482 ACTR8Q9H981 624 aa14.2□□□□□ -0.14
SKA3-204ENST00000462482 LYARQ9NX58 379 aaKnown RBP14.2□□□□□ -0.14
SKA3-204ENST00000462482 PCDHGA11Q9Y5H2 935 aa14.2□□□□□ -0.14
SKA3-204ENST00000462482 FAM215AQ9Y5M1 114 aa14.2□□□□□ -0.14
SKA3-204ENST00000462482 F8P00451 2351 aa14.19□□□□□ -0.14
SKA3-204ENST00000462482 POLQO75417 2590 aa14.19□□□□□ -0.14
SKA3-204ENST00000462482 A0A0G2JNJ9 132 aa14.19□□□□□ -0.14
SKA3-204ENST00000462482 HSPB2A8KAH6 182 aa14.19□□□□□ -0.14
SKA3-204ENST00000462482 TP53I11O14683 189 aa14.19□□□□□ -0.14
SKA3-204ENST00000462482 IGKV3-11P04433 115 aa14.19□□□□□ -0.14
SKA3-204ENST00000462482 CELA3AP09093 270 aa14.19□□□□□ -0.14
SKA3-204ENST00000462482 PTX3P26022 381 aaPredicted RBP14.19□□□□□ -0.14
SKA3-204ENST00000462482 ARFIP1P53367 373 aa14.19□□□□□ -0.14
SKA3-204ENST00000462482 CAV1Q03135 178 aa14.19□□□□□ -0.14
SKA3-204ENST00000462482 E2F2Q14209 437 aa14.19□□□□□ -0.14
SKA3-204ENST00000462482 ZNF267Q14586 743 aaPredicted RBP14.19□□□□□ -0.14
SKA3-204ENST00000462482 SF3B4Q15427 424 aaKnown RBP eCLIP14.19□□□□□ -0.14
SKA3-204ENST00000462482 HSPB2Q16082 182 aa14.19□□□□□ -0.14
SKA3-204ENST00000462482 FAM83EQ2M2I3 478 aa14.19□□□□□ -0.14
SKA3-204ENST00000462482 ZNF791Q3KP31 576 aaPredicted RBP14.19□□□□□ -0.14
SKA3-204ENST00000462482 RIPPLY2Q5TAB7 128 aa14.19□□□□□ -0.14
SKA3-204ENST00000462482 PRAMEF20Q5VT98 475 aa14.19□□□□□ -0.14
SKA3-204ENST00000462482 HLA-DQA1Q5Y7H0 255 aa14.19□□□□□ -0.14
SKA3-204ENST00000462482 CCDC91Q7Z6B0 441 aa14.19□□□□□ -0.14
SKA3-204ENST00000462482 CCDC25Q86WR0 208 aa14.19□□□□□ -0.14
SKA3-204ENST00000462482 C9orf40Q8IXQ3 194 aa14.19□□□□□ -0.14
SKA3-204ENST00000462482 FBXW8Q8N3Y1 598 aa14.19□□□□□ -0.14
SKA3-204ENST00000462482 ZCCHC7Q8N3Z6 543 aaKnown RBP14.19□□□□□ -0.14
SKA3-204ENST00000462482 HUS1BQ8NHY5 278 aa14.19□□□□□ -0.14
SKA3-204ENST00000462482 UBTD2Q8WUN7 234 aa14.19□□□□□ -0.14
SKA3-204ENST00000462482 ANP32BQ92688 251 aaKnown RBP14.19□□□□□ -0.14
SKA3-204ENST00000462482 DOHHQ9BU89 302 aa14.19□□□□□ -0.14
SKA3-204ENST00000462482 SEMA4BQ9NPR2 832 aaPredicted RBP14.19□□□□□ -0.14
SKA3-204ENST00000462482 QPCTLQ9NXS2 382 aa14.19□□□□□ -0.14
SKA3-204ENST00000462482 DNAJB12Q9NXW2 375 aaKnown RBP14.19□□□□□ -0.14
SKA3-204ENST00000462482 Q9UFV3 132 aa14.19□□□□□ -0.14
SKA3-204ENST00000462482 ACOT9Q9Y305 439 aa14.19□□□□□ -0.14
SKA3-204ENST00000462482 UTP11Q9Y3A2 253 aaKnown RBP14.19□□□□□ -0.14
SKA3-204ENST00000462482 PCDHGB3Q9Y5G1 929 aa14.19□□□□□ -0.14
SKA3-204ENST00000462482 OR6C76A6NM76 312 aa14.18□□□□□ -0.14
SKA3-204ENST00000462482 UBXN8O00124 270 aa14.18□□□□□ -0.14
SKA3-204ENST00000462482 ZNF354AO60765 605 aaPredicted RBP14.18□□□□□ -0.14
SKA3-204ENST00000462482 GPR75O95800 540 aa14.18□□□□□ -0.14
SKA3-204ENST00000462482 NR2F6P10588 404 aa14.18□□□□□ -0.14
SKA3-204ENST00000462482 GFAPP14136 432 aa14.18□□□□□ -0.14
SKA3-204ENST00000462482 HERVK_113P63132 956 aa14.18□□□□□ -0.14
SKA3-204ENST00000462482 ERVK-8P63133 956 aa14.18□□□□□ -0.14
SKA3-204ENST00000462482 MRPS25P82663 173 aaKnown RBP14.18□□□□□ -0.14
SKA3-204ENST00000462482 PCDH1Q08174 1060 aa14.18□□□□□ -0.14
SKA3-204ENST00000462482 NAB1Q13506 487 aa14.18□□□□□ -0.14
SKA3-204ENST00000462482 KBTBD12Q3ZCT8 623 aa14.18□□□□□ -0.14
SKA3-204ENST00000462482 TBCELQ5QJ74 424 aa14.18□□□□□ -0.14
SKA3-204ENST00000462482 C6orf163Q5TEZ5 329 aa14.18□□□□□ -0.14
SKA3-204ENST00000462482 LIPJQ5W064 366 aa14.18□□□□□ -0.14
SKA3-204ENST00000462482 TMEM198Q66K66 360 aa14.18□□□□□ -0.14
SKA3-204ENST00000462482 RTL6Q6ICC9 239 aa14.18□□□□□ -0.14
SKA3-204ENST00000462482 KLC3Q6P597 504 aa14.18□□□□□ -0.14
SKA3-204ENST00000462482 ARSKQ6UWY0 536 aa14.18□□□□□ -0.14
SKA3-204ENST00000462482 CMC1Q7Z7K0 106 aa14.18□□□□□ -0.14
SKA3-204ENST00000462482 ISCA2Q86U28 154 aa14.18□□□□□ -0.14
SKA3-204ENST00000462482 CHDHQ8NE62 594 aaPredicted RBP14.18□□□□□ -0.14
SKA3-204ENST00000462482 RIT1Q92963 219 aa14.18□□□□□ -0.14
SKA3-204ENST00000462482 MTERF1Q99551 399 aaKnown RBP14.18□□□□□ -0.14
SKA3-204ENST00000462482 SORBS1Q9BX66 1292 aaKnown RBP14.18□□□□□ -0.14
SKA3-204ENST00000462482 ERVK-6Q9BXR3 956 aa14.18□□□□□ -0.14
SKA3-204ENST00000462482 KCNF1Q9H3M0 494 aa14.18□□□□□ -0.14
SKA3-204ENST00000462482 ZNF703Q9H7S9 590 aaPredicted RBP14.18□□□□□ -0.14
SKA3-204ENST00000462482 GRPEL1Q9HAV7 217 aa14.18□□□□□ -0.14
SKA3-204ENST00000462482 DMRT3Q9NQL9 472 aa14.18□□□□□ -0.14
SKA3-204ENST00000462482 ERVK-19Q9WJR5 959 aa14.18□□□□□ -0.14
SKA3-204ENST00000462482 PCNX1Q96RV3 2341 aa14.18□□□□□ -0.14
SKA3-204ENST00000462482 A0A087X1B8 175 aa14.17□□□□□ -0.14
SKA3-204ENST00000462482 C15orf38-AP3S2A0A0A6YYH1 394 aa14.17□□□□□ -0.14
SKA3-204ENST00000462482 CCDC189A1A4V9 331 aa14.17□□□□□ -0.14
SKA3-204ENST00000462482 DVL2O14641 736 aa14.17□□□□□ -0.14
SKA3-204ENST00000462482 FBXO45P0C2W1 286 aa14.17□□□□□ -0.14
SKA3-204ENST00000462482 SLC35E2BP0CK96 405 aa14.17□□□□□ -0.14
SKA3-204ENST00000462482 GDF1P27539 372 aa14.17□□□□□ -0.14
SKA3-204ENST00000462482 UQCRC1P31930 480 aa14.17□□□□□ -0.14
SKA3-204ENST00000462482 ARL1P40616 181 aaPredicted RBP14.17□□□□□ -0.14
SKA3-204ENST00000462482 KIR2DL3P43628 341 aa14.17□□□□□ -0.14
SKA3-204ENST00000462482 PIK3CGP48736 1102 aa14.17□□□□□ -0.14
SKA3-204ENST00000462482 TMED10P49755 219 aaKnown RBP14.17□□□□□ -0.14
SKA3-204ENST00000462482 RPP38P78345 283 aaKnown RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms