RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 PCDHGA10Q9Y5H3 936 aa9.87□□□□□ -0.83
TRAPPC12-213ENST00000461577 PCDHA9Q9Y5H5 950 aa9.87□□□□□ -0.83
TRAPPC12-213ENST00000461577 ACTL7BQ9Y614 415 aa9.87□□□□□ -0.83
TRAPPC12-213ENST00000461577 COPG1Q9Y678 874 aaKnown RBP9.87□□□□□ -0.83
TRAPPC12-213ENST00000461577 SPTA1P02549 2419 aa9.86□□□□□ -0.83
TRAPPC12-213ENST00000461577 WASHC1A8K0Z3 465 aa9.86□□□□□ -0.83
TRAPPC12-213ENST00000461577 CDK2AP1O14519 115 aa9.86□□□□□ -0.83
TRAPPC12-213ENST00000461577 MAN1A2O60476 641 aa9.86□□□□□ -0.83
TRAPPC12-213ENST00000461577 PRAMEF2O60811 474 aa9.86□□□□□ -0.83
TRAPPC12-213ENST00000461577 CHRNGP07510 517 aa9.86□□□□□ -0.83
TRAPPC12-213ENST00000461577 TIA1P31483 386 aaKnown RBP eCLIP9.86□□□□□ -0.83
TRAPPC12-213ENST00000461577 ETV4P43268 484 aa9.86□□□□□ -0.83
TRAPPC12-213ENST00000461577 SERPINB4P48594 390 aa9.86□□□□□ -0.83
TRAPPC12-213ENST00000461577 ST13P50502 369 aaKnown RBP9.86□□□□□ -0.83
TRAPPC12-213ENST00000461577 GPR143P51810 404 aa9.86□□□□□ -0.83
TRAPPC12-213ENST00000461577 RAE1P78406 368 aaKnown RBP9.86□□□□□ -0.83
TRAPPC12-213ENST00000461577 TUBA3CQ13748 450 aa9.86□□□□□ -0.83
TRAPPC12-213ENST00000461577 CASP8Q14790 479 aa9.86□□□□□ -0.83
TRAPPC12-213ENST00000461577 IGFBP7Q16270 282 aa9.86□□□□□ -0.83
TRAPPC12-213ENST00000461577 PRR30Q53SZ7 412 aaPredicted RBP9.86□□□□□ -0.83
TRAPPC12-213ENST00000461577 TNFAIP8L3Q5GJ75 292 aa9.86□□□□□ -0.83
TRAPPC12-213ENST00000461577 ARL13AQ5H913 290 aaPredicted RBP9.86□□□□□ -0.83
TRAPPC12-213ENST00000461577 TUBA3EQ6PEY2 450 aa9.86□□□□□ -0.83
TRAPPC12-213ENST00000461577 HSDL2Q6YN16 418 aa9.86□□□□□ -0.83
TRAPPC12-213ENST00000461577 TRIM46Q7Z4K8 759 aa9.86□□□□□ -0.83
TRAPPC12-213ENST00000461577 ATCAYQ86WG3 371 aa9.86□□□□□ -0.83
TRAPPC12-213ENST00000461577 CLYBLQ8N0X4 340 aa9.86□□□□□ -0.83
TRAPPC12-213ENST00000461577 HORMAD2Q8N7B1 307 aa9.86□□□□□ -0.83
TRAPPC12-213ENST00000461577 C16orf78Q8WTQ4 265 aa9.86□□□□□ -0.83
TRAPPC12-213ENST00000461577 RIT1Q92963 219 aa9.86□□□□□ -0.83
TRAPPC12-213ENST00000461577 MIB2Q96AX9 1013 aa9.86□□□□□ -0.83
TRAPPC12-213ENST00000461577 PKNOX2Q96KN3 472 aa9.86□□□□□ -0.83
TRAPPC12-213ENST00000461577 PAIP2Q9BPZ3 127 aaKnown RBP9.86□□□□□ -0.83
TRAPPC12-213ENST00000461577 CNPPD1Q9BV87 410 aa9.86□□□□□ -0.83
TRAPPC12-213ENST00000461577 EBPLQ9BY08 206 aa9.86□□□□□ -0.83
TRAPPC12-213ENST00000461577 PFDN4Q9NQP4 134 aa9.86□□□□□ -0.83
TRAPPC12-213ENST00000461577 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.86□□□□□ -0.83
TRAPPC12-213ENST00000461577 ARGLU1Q9NWB6 273 aaPredicted RBP9.86□□□□□ -0.83
TRAPPC12-213ENST00000461577 ANKRD10Q9NXR5 420 aa9.86□□□□□ -0.83
TRAPPC12-213ENST00000461577 ZNF223Q9UK11 482 aaPredicted RBP9.86□□□□□ -0.83
TRAPPC12-213ENST00000461577 TRAF6Q9Y4K3 522 aa9.86□□□□□ -0.83
TRAPPC12-213ENST00000461577 CROCCQ5TZA2 2017 aa9.85□□□□□ -0.83
TRAPPC12-213ENST00000461577 BIRC5O15392 142 aa9.85□□□□□ -0.83
TRAPPC12-213ENST00000461577 VPS4BO75351 444 aa9.85□□□□□ -0.83
TRAPPC12-213ENST00000461577 SEC22BO75396 215 aa9.85□□□□□ -0.83
TRAPPC12-213ENST00000461577 ERAL1O75616 437 aaKnown RBP9.85□□□□□ -0.83
TRAPPC12-213ENST00000461577 RSL1D1O76021 490 aaKnown RBP9.85□□□□□ -0.83
TRAPPC12-213ENST00000461577 WISP1O95388 367 aa9.85□□□□□ -0.83
TRAPPC12-213ENST00000461577 DDAH2O95865 285 aa9.85□□□□□ -0.83
TRAPPC12-213ENST00000461577 IL3P08700 152 aa9.85□□□□□ -0.83
TRAPPC12-213ENST00000461577 ANXA4P09525 319 aaPredicted RBP9.85□□□□□ -0.83
TRAPPC12-213ENST00000461577 SLC35E2P0CK97 266 aa9.85□□□□□ -0.83
TRAPPC12-213ENST00000461577 CD46P15529 392 aa9.85□□□□□ -0.83
TRAPPC12-213ENST00000461577 PORP16435 677 aaPredicted RBP9.85□□□□□ -0.83
TRAPPC12-213ENST00000461577 NT5EP21589 574 aa9.85□□□□□ -0.83
TRAPPC12-213ENST00000461577 GALNSP34059 522 aa9.85□□□□□ -0.83
TRAPPC12-213ENST00000461577 CD96P40200 585 aa9.85□□□□□ -0.83
TRAPPC12-213ENST00000461577 GSTM5P46439 218 aa9.85□□□□□ -0.83
TRAPPC12-213ENST00000461577 XKP51811 444 aa9.85□□□□□ -0.83
TRAPPC12-213ENST00000461577 ERVK-8P63133 956 aa9.85□□□□□ -0.83
TRAPPC12-213ENST00000461577 FOXK1P85037 733 aa9.85□□□□□ -0.83
TRAPPC12-213ENST00000461577 ZNF267Q14586 743 aaPredicted RBP9.85□□□□□ -0.83
TRAPPC12-213ENST00000461577 HEPACAMQ14CZ8 416 aa9.85□□□□□ -0.83
TRAPPC12-213ENST00000461577 OR1C1Q15619 314 aa9.85□□□□□ -0.83
TRAPPC12-213ENST00000461577 CHI3L2Q15782 390 aa9.85□□□□□ -0.83
TRAPPC12-213ENST00000461577 SPRED3Q2MJR0 410 aa9.85□□□□□ -0.83
TRAPPC12-213ENST00000461577 ZNF766Q5HY98 468 aa9.85□□□□□ -0.83
TRAPPC12-213ENST00000461577 SH2D4BQ5SQS7 431 aa9.85□□□□□ -0.83
TRAPPC12-213ENST00000461577 HHATQ5VTY9 493 aa9.85□□□□□ -0.83
TRAPPC12-213ENST00000461577 KANK2Q63ZY3 851 aa9.85□□□□□ -0.83
TRAPPC12-213ENST00000461577 RPUSD3Q6P087 351 aaKnown RBP9.85□□□□□ -0.83
TRAPPC12-213ENST00000461577 SLC48A1Q6P1K1 146 aa9.85□□□□□ -0.83
TRAPPC12-213ENST00000461577 DGAT2L6Q6ZPD8 337 aa9.85□□□□□ -0.83
TRAPPC12-213ENST00000461577 DDIASQ8IXT1 998 aa9.85□□□□□ -0.83
TRAPPC12-213ENST00000461577 MMP21Q8N119 569 aa9.85□□□□□ -0.83
TRAPPC12-213ENST00000461577 TMEM156Q8N614 296 aa9.85□□□□□ -0.83
TRAPPC12-213ENST00000461577 ZNF321PQ8N8H1 164 aa9.85□□□□□ -0.83
TRAPPC12-213ENST00000461577 ANKRD42Q8N9B4 389 aa9.85□□□□□ -0.83
TRAPPC12-213ENST00000461577 OR5L2Q8NGL0 311 aa9.85□□□□□ -0.83
TRAPPC12-213ENST00000461577 CDC26Q8NHZ8 85 aa9.85□□□□□ -0.83
TRAPPC12-213ENST00000461577 FAM76AQ8TAV0 307 aa9.85□□□□□ -0.83
TRAPPC12-213ENST00000461577 AGR3Q8TD06 166 aa9.85□□□□□ -0.83
TRAPPC12-213ENST00000461577 DOK4Q8TEW6 326 aa9.85□□□□□ -0.83
TRAPPC12-213ENST00000461577 ZNF721Q8TF20 911 aa9.85□□□□□ -0.83
TRAPPC12-213ENST00000461577 TWIST2Q8WVJ9 160 aa9.85□□□□□ -0.83
TRAPPC12-213ENST00000461577 KLHL29Q96CT2 875 aa9.85□□□□□ -0.83
TRAPPC12-213ENST00000461577 SNRNP40Q96DI7 357 aaKnown RBP9.85□□□□□ -0.83
TRAPPC12-213ENST00000461577 SENP5Q96HI0 755 aaPredicted RBP9.85□□□□□ -0.83
TRAPPC12-213ENST00000461577 C5orf34Q96MH7 638 aa9.85□□□□□ -0.83
TRAPPC12-213ENST00000461577 TMBIM4Q9HC24 238 aa9.85□□□□□ -0.83
TRAPPC12-213ENST00000461577 AGPAT4Q9NRZ5 378 aa9.85□□□□□ -0.83
TRAPPC12-213ENST00000461577 SIRT5Q9NXA8 310 aa9.85□□□□□ -0.83
TRAPPC12-213ENST00000461577 LRFN1Q9P244 771 aa9.85□□□□□ -0.83
TRAPPC12-213ENST00000461577 VPS4AQ9UN37 437 aa9.85□□□□□ -0.83
TRAPPC12-213ENST00000461577 ERVK-19Q9WJR5 959 aa9.85□□□□□ -0.83
TRAPPC12-213ENST00000461577 DLGAP4Q9Y2H0 992 aa9.85□□□□□ -0.83
TRAPPC12-213ENST00000461577 ZNF780BQ9Y6R6 833 aa9.85□□□□□ -0.83
TRAPPC12-213ENST00000461577 CNTRLQ7Z7A1 2325 aa9.84□□□□□ -0.83
TRAPPC12-213ENST00000461577 PRKNO60260 465 aaPredicted RBP9.84□□□□□ -0.83
TRAPPC12-213ENST00000461577 ITGA10O75578 1167 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms