RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 KCNK10P57789 538 aa2.78□□□□□ -1.96
RFC4-211ENST00000460408 STARD6P59095 220 aa2.78□□□□□ -1.96
RFC4-211ENST00000460408 FKBP3Q00688 224 aaKnown RBP2.78□□□□□ -1.96
RFC4-211ENST00000460408 TSTA3Q13630 321 aaPredicted RBP2.78□□□□□ -1.96
RFC4-211ENST00000460408 CDC37Q16543 378 aaPredicted RBP2.78□□□□□ -1.96
RFC4-211ENST00000460408 GLIPR1L2Q4G1C9 344 aa2.78□□□□□ -1.96
RFC4-211ENST00000460408 PRAMEF7Q5VXH5 474 aa2.78□□□□□ -1.96
RFC4-211ENST00000460408 TATDN1Q6P1N9 297 aa2.78□□□□□ -1.96
RFC4-211ENST00000460408 DOK6Q6PKX4 331 aa2.78□□□□□ -1.96
RFC4-211ENST00000460408 ITIH5Q86UX2 942 aa2.78□□□□□ -1.96
RFC4-211ENST00000460408 KCNMB4Q86W47 210 aa2.78□□□□□ -1.96
RFC4-211ENST00000460408 FAM131BQ86XD5 332 aa2.78□□□□□ -1.96
RFC4-211ENST00000460408 ZNF440Q8IYI8 595 aa2.78□□□□□ -1.96
RFC4-211ENST00000460408 OR6M1Q8NGM8 313 aa2.78□□□□□ -1.96
RFC4-211ENST00000460408 MIPOL1Q8TD10 442 aa2.78□□□□□ -1.96
RFC4-211ENST00000460408 ZNF560Q96MR9 790 aa2.78□□□□□ -1.96
RFC4-211ENST00000460408 GPR137Q96N19 417 aa2.78□□□□□ -1.96
RFC4-211ENST00000460408 SPATA13Q96N96 652 aa2.78□□□□□ -1.96
RFC4-211ENST00000460408 AGAP3Q96P47 875 aa2.78□□□□□ -1.96
RFC4-211ENST00000460408 ALKBH3Q96Q83 286 aaPredicted RBP2.78□□□□□ -1.96
RFC4-211ENST00000460408 RBM4BQ9BQ04 359 aaKnown RBP2.78□□□□□ -1.96
RFC4-211ENST00000460408 CABLES2Q9BTV7 478 aa2.78□□□□□ -1.96
RFC4-211ENST00000460408 GANQ9H2C0 597 aa2.78□□□□□ -1.96
RFC4-211ENST00000460408 DCLRE1BQ9H816 532 aa2.78□□□□□ -1.96
RFC4-211ENST00000460408 MARCH7Q9H992 704 aa2.78□□□□□ -1.96
RFC4-211ENST00000460408 DDX28Q9NUL7 540 aaKnown RBP2.78□□□□□ -1.96
RFC4-211ENST00000460408 ACOXLQ9NUZ1 547 aa2.78□□□□□ -1.96
RFC4-211ENST00000460408 TRIM10Q9UDY6 481 aa2.78□□□□□ -1.96
RFC4-211ENST00000460408 FETUBQ9UGM5 382 aa2.78□□□□□ -1.96
RFC4-211ENST00000460408 TEKT2Q9UIF3 430 aa2.78□□□□□ -1.96
RFC4-211ENST00000460408 SYNMO15061 1565 aa2.78□□□□□ -1.96
RFC4-211ENST00000460408 CFAP74Q9C0B2 1584 aa2.78□□□□□ -1.96
RFC4-211ENST00000460408 ZMYM4Q5VZL5 1548 aa2.78□□□□□ -1.97
RFC4-211ENST00000460408 ATP10AO60312 1499 aa2.77□□□□□ -1.97
RFC4-211ENST00000460408 RGS12O14924 1447 aa2.77□□□□□ -1.97
RFC4-211ENST00000460408 SPAG9O60271 1321 aaKnown RBP2.77□□□□□ -1.97
RFC4-211ENST00000460408 C3P01024 1663 aa2.77□□□□□ -1.97
RFC4-211ENST00000460408 CEP350Q5VT06 3117 aa2.77□□□□□ -1.97
RFC4-211ENST00000460408 IGLV4-3A0A075B6K6 122 aa2.77□□□□□ -1.97
RFC4-211ENST00000460408 TRBV2A0A0J9YWF9 115 aa2.77□□□□□ -1.97
RFC4-211ENST00000460408 A0A0J9YWU9 116 aa2.77□□□□□ -1.97
RFC4-211ENST00000460408 OR5H15A6NDH6 313 aa2.77□□□□□ -1.97
RFC4-211ENST00000460408 ZNF724A8MTY0 619 aa2.77□□□□□ -1.97
RFC4-211ENST00000460408 OGTO15294 1046 aa2.77□□□□□ -1.97
RFC4-211ENST00000460408 ZNF749O43361 778 aa2.77□□□□□ -1.97
RFC4-211ENST00000460408 CSO75390 466 aaKnown RBP2.77□□□□□ -1.97
RFC4-211ENST00000460408 OR6B1O95007 311 aa2.77□□□□□ -1.97
RFC4-211ENST00000460408 SERPINF2P08697 491 aa2.77□□□□□ -1.97
RFC4-211ENST00000460408 GSTA2P09210 222 aa2.77□□□□□ -1.97
RFC4-211ENST00000460408 PCP11498 1178 aaKnown RBP2.77□□□□□ -1.97
RFC4-211ENST00000460408 AREGP15514 252 aa2.77□□□□□ -1.97
RFC4-211ENST00000460408 RPL27P61353 136 aaKnown RBP2.77□□□□□ -1.97
RFC4-211ENST00000460408 HERV-K104P63124 156 aa2.77□□□□□ -1.97
RFC4-211ENST00000460408 GFPT1Q06210 699 aaPredicted RBP2.77□□□□□ -1.97
RFC4-211ENST00000460408 RBBP4Q09028 425 aa2.77□□□□□ -1.97
RFC4-211ENST00000460408 ELAVL2Q12926 359 aaKnown RBP2.77□□□□□ -1.97
RFC4-211ENST00000460408 MS4A18Q3C1V0 323 aa2.77□□□□□ -1.97
RFC4-211ENST00000460408 ETFRF1Q6IPR1 90 aa2.77□□□□□ -1.97
RFC4-211ENST00000460408 DLEU7Q6UYE1 221 aa2.77□□□□□ -1.97
RFC4-211ENST00000460408 ZNF730Q6ZMV8 503 aa2.77□□□□□ -1.97
RFC4-211ENST00000460408 TOM1L2Q6ZVM7 507 aa2.77□□□□□ -1.97
RFC4-211ENST00000460408 PHC2Q8IXK0 858 aa2.77□□□□□ -1.97
RFC4-211ENST00000460408 Q8N377 158 aa2.77□□□□□ -1.97
RFC4-211ENST00000460408 OR52E1Q8NGJ3 308 aa2.77□□□□□ -1.97
RFC4-211ENST00000460408 GOLGA5Q8TBA6 731 aa2.77□□□□□ -1.97
RFC4-211ENST00000460408 SPPL2AQ8TCT8 520 aa2.77□□□□□ -1.97
RFC4-211ENST00000460408 URGCPQ8TCY9 931 aa2.77□□□□□ -1.97
RFC4-211ENST00000460408 MRPL24Q96A35 216 aaKnown RBP2.77□□□□□ -1.97
RFC4-211ENST00000460408 NABP1Q96AH0 204 aa2.77□□□□□ -1.97
RFC4-211ENST00000460408 SLC45A3Q96JT2 553 aa2.77□□□□□ -1.97
RFC4-211ENST00000460408 IWS1Q96ST2 819 aa2.77□□□□□ -1.97
RFC4-211ENST00000460408 NAP1L3Q99457 506 aaPredicted RBP2.77□□□□□ -1.97
RFC4-211ENST00000460408 VGLL1Q99990 258 aa2.77□□□□□ -1.97
RFC4-211ENST00000460408 JPH2Q9BR39 696 aaPredicted RBP2.77□□□□□ -1.97
RFC4-211ENST00000460408 TRIM51Q9BSJ1 452 aa2.77□□□□□ -1.97
RFC4-211ENST00000460408 ZNF577Q9BSK1 485 aa2.77□□□□□ -1.97
RFC4-211ENST00000460408 LRRC61Q9BV99 259 aa2.77□□□□□ -1.97
RFC4-211ENST00000460408 TEX13AQ9BXU3 409 aaPredicted RBP2.77□□□□□ -1.97
RFC4-211ENST00000460408 EGLN1Q9GZT9 426 aa2.77□□□□□ -1.97
RFC4-211ENST00000460408 SLC26A1Q9H2B4 701 aa2.77□□□□□ -1.97
RFC4-211ENST00000460408 PLEKHA3Q9HB20 300 aa2.77□□□□□ -1.97
RFC4-211ENST00000460408 NMUR1Q9HB89 426 aa2.77□□□□□ -1.97
RFC4-211ENST00000460408 GPN1Q9HCN4 374 aaPredicted RBP2.77□□□□□ -1.97
RFC4-211ENST00000460408 UBE2TQ9NPD8 197 aaPredicted RBP2.77□□□□□ -1.97
RFC4-211ENST00000460408 CTSZQ9UBR2 303 aa2.77□□□□□ -1.97
RFC4-211ENST00000460408 IL19Q9UHD0 177 aa2.77□□□□□ -1.97
RFC4-211ENST00000460408 TSPAN16Q9UKR8 245 aa2.77□□□□□ -1.97
RFC4-211ENST00000460408 MRPS2Q9Y399 296 aaKnown RBP2.77□□□□□ -1.97
RFC4-211ENST00000460408 PRSS21Q9Y6M0 314 aa2.77□□□□□ -1.97
RFC4-211ENST00000460408 KDM5CP41229 1560 aa2.77□□□□□ -1.97
RFC4-211ENST00000460408 NWD1Q149M9 1564 aa2.77□□□□□ -1.97
RFC4-211ENST00000460408 LRRC9Q6ZRR7 1453 aa2.77□□□□□ -1.97
RFC4-211ENST00000460408 NPC1L1Q9UHC9 1359 aa2.76□□□□□ -1.97
RFC4-211ENST00000460408 ALKQ9UM73 1620 aa2.76□□□□□ -1.97
RFC4-211ENST00000460408 AFF2P51816 1311 aa2.76□□□□□ -1.97
RFC4-211ENST00000460408 IGKV3D-15A0A087WSY6 115 aa2.76□□□□□ -1.97
RFC4-211ENST00000460408 KIAA0513O60268 411 aa2.76□□□□□ -1.97
RFC4-211ENST00000460408 LRP3O75074 770 aa2.76□□□□□ -1.97
RFC4-211ENST00000460408 FRAT2O75474 233 aaPredicted RBP2.76□□□□□ -1.97
RFC4-211ENST00000460408 IGHG1P01857 330 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms