RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 PIGGQ5H8A4 983 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 PAGE3Q5JUK9 113 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 PERM1Q5SV97 790 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 GCNT6Q5T4J0 391 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 ANKRD26P1Q6NSI1 321 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 ZCCHC12Q6PEW1 402 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 VN1R5Q7Z5H4 357 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 VN1R4Q7Z5H5 301 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 PATL1Q86TB9 770 aaKnown RBP5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 AQP12AQ8IXF9 295 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 SLC15A3Q8IY34 581 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 MICU2Q8IYU8 434 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 EID3Q8N140 333 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 OR52N2Q8NGI0 321 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 OR2I1PQ8NGU4 316 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 GOT1L1Q8NHS2 421 aaPredicted RBP5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 SFXN5Q8TD22 340 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 XAGE5Q8WWM1 108 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 DAZLQ92904 295 aaKnown RBP5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 RIT1Q92963 219 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 MIEF2Q96C03 454 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 C11orf24Q96F05 449 aaPredicted RBP5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 REXO5Q96IC2 774 aaKnown RBP5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 SLC35G5Q96KT7 338 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 TEX37Q96LM6 180 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 RNF145Q96MT1 663 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 PTCHD1Q96NR3 888 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 NRTNQ99748 197 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 NUDT22Q9BRQ3 303 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 LRFN3Q9BTN0 628 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 BDH2Q9BUT1 245 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 ALOXE3Q9BYJ1 711 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 ULBP3Q9BZM4 244 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 SPRTNQ9H040 489 aaPredicted RBP5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 SMOC1Q9H4F8 434 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 PIF1Q9H611 641 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 RUBCNLQ9H714 662 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 FAM60AQ9NP50 221 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 FBXO8Q9NRD0 319 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 C14orf105Q9NVL8 296 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 TEX10Q9NXF1 929 aaPredicted RBP5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 KLHL28Q9NXS3 571 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 TMEM181Q9P2C4 612 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 P2RX2Q9UBL9 471 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 SLC7A8Q9UHI5 535 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 NXT1Q9UKK6 140 aaKnown RBP5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 AURKCQ9UQB9 309 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 LIPT1Q9Y234 373 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 ATG4BQ9Y4P1 393 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 MMACHCQ9Y4U1 282 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 ASB4Q9Y574 426 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 AP4S1Q9Y587 144 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 PCDHB3Q9Y5E6 796 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 PCDHGA1Q9Y5H4 931 aa5.51□□□□□ -1.53
RNU1-88P-201ENST00000459274 NCOR1O75376 2440 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 ARID1BQ8NFD5 2236 aaPredicted RBP5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 FITM1A5D6W6 292 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 PRORSD1PA6NEY8 169 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 ZNF860A6NHJ4 632 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 H0Y3Z8 333 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 CXCR6O00574 342 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 SUV39H1O43463 412 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 BRINP1O60477 761 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 PRAMEF2O60811 474 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 ZNF682O95780 498 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 AK1P00568 194 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 IGHEP01854 428 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 GPIP06744 558 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 SLC35E2P0CK97 266 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 GIMD1P0DJR0 217 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 SMIM10L1P0DMW3 83 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 MYF5P13349 255 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 HOXB3P14651 431 aaPredicted RBP5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 FOLR1P15328 257 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 FASP25445 335 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 RBMS1P29558 406 aaKnown RBP5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 LSSP48449 732 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 CLK3P49761 638 aaKnown RBP5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 GSK3BP49841 420 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 POLE2P56282 527 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 ACTR3P61158 418 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 PPP1CAP62136 330 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 RPS15P62841 145 aaKnown RBP5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 PSPHP78330 225 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 OLR1P78380 273 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 SIM1P81133 766 aaPredicted RBP5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 FOLH1Q04609 750 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 HYAL2Q12891 473 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 RUNX2Q13950 521 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 VEZF1Q14119 521 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 DSG2Q14126 1118 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 NSDHLQ15738 373 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 VMACQ2NL98 169 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 RABL3Q5HYI8 236 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 TBCELQ5QJ74 424 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 C18orf63Q68DL7 685 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 MRM1Q6IN84 353 aaKnown RBP5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 TCEAL6Q6IPX3 200 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 RHBDD2Q6NTF9 364 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms