RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 KCNJ2P63252 427 aa19.85■□□□□ 0.77
CPNE1-220ENST00000458038 ID2Q02363 134 aa19.85■□□□□ 0.77
CPNE1-220ENST00000458038 FOLH1Q04609 750 aa19.85■□□□□ 0.77
CPNE1-220ENST00000458038 CALCOCO2Q13137 446 aa19.85■□□□□ 0.77
CPNE1-220ENST00000458038 SLAMF1Q13291 335 aa19.85■□□□□ 0.77
CPNE1-220ENST00000458038 ARSKQ6UWY0 536 aa19.85■□□□□ 0.77
CPNE1-220ENST00000458038 CAPN12Q6ZSI9 719 aa19.85■□□□□ 0.77
CPNE1-220ENST00000458038 SLC29A4Q7RTT9 530 aa19.85■□□□□ 0.77
CPNE1-220ENST00000458038 GPR180Q86V85 440 aa19.85■□□□□ 0.77
CPNE1-220ENST00000458038 ST13P4Q8IZP2 240 aaPredicted RBP19.85■□□□□ 0.77
CPNE1-220ENST00000458038 FBXW8Q8N3Y1 598 aa19.85■□□□□ 0.77
CPNE1-220ENST00000458038 ZCCHC7Q8N3Z6 543 aaKnown RBP19.85■□□□□ 0.77
CPNE1-220ENST00000458038 UBTD2Q8WUN7 234 aa19.85■□□□□ 0.77
CPNE1-220ENST00000458038 SREK1Q8WXA9 508 aaKnown RBP19.85■□□□□ 0.77
CPNE1-220ENST00000458038 LRRC46Q96FV0 321 aa19.85■□□□□ 0.77
CPNE1-220ENST00000458038 WHRNQ9P202 907 aa19.85■□□□□ 0.77
CPNE1-220ENST00000458038 SNX24Q9Y343 169 aa19.85■□□□□ 0.77
CPNE1-220ENST00000458038 L3MBTL1Q9Y468 752 aa19.85■□□□□ 0.77
CPNE1-220ENST00000458038 PRRC2AP48634 2157 aaKnown RBP19.84■□□□□ 0.77
CPNE1-220ENST00000458038 IQANK1A0A1B0GTG1 560 aa19.84■□□□□ 0.77
CPNE1-220ENST00000458038 CCDC189A1A4V9 331 aa19.84■□□□□ 0.77
CPNE1-220ENST00000458038 FAM159BA6NKW6 160 aa19.84■□□□□ 0.77
CPNE1-220ENST00000458038 HSPB2A8KAH6 182 aa19.84■□□□□ 0.77
CPNE1-220ENST00000458038 PIAS1O75925 651 aa19.84■□□□□ 0.77
CPNE1-220ENST00000458038 CELA3AP09093 270 aa19.84■□□□□ 0.77
CPNE1-220ENST00000458038 ALOX15P16050 662 aaPredicted RBP19.84■□□□□ 0.77
CPNE1-220ENST00000458038 EPB42P16452 691 aa19.84■□□□□ 0.77
CPNE1-220ENST00000458038 PIGAP37287 484 aa19.84■□□□□ 0.77
CPNE1-220ENST00000458038 BUD31P41223 144 aaPredicted RBP19.84■□□□□ 0.77
CPNE1-220ENST00000458038 RAP1GDS1P52306 607 aa19.84■□□□□ 0.77
CPNE1-220ENST00000458038 HSPB2Q16082 182 aa19.84■□□□□ 0.77
CPNE1-220ENST00000458038 GRTP1Q5TC63 336 aa19.84■□□□□ 0.77
CPNE1-220ENST00000458038 GRHL2Q6ISB3 625 aa19.84■□□□□ 0.77
CPNE1-220ENST00000458038 C3orf62Q6ZUJ4 267 aa19.84■□□□□ 0.77
CPNE1-220ENST00000458038 C9orf40Q8IXQ3 194 aa19.84■□□□□ 0.77
CPNE1-220ENST00000458038 LRRC25Q8N386 305 aaPredicted RBP19.84■□□□□ 0.77
CPNE1-220ENST00000458038 CHDHQ8NE62 594 aaPredicted RBP19.84■□□□□ 0.77
CPNE1-220ENST00000458038 NAPGQ99747 312 aaPredicted RBP19.84■□□□□ 0.77
CPNE1-220ENST00000458038 SAYSD1Q9NPB0 183 aa19.84■□□□□ 0.77
CPNE1-220ENST00000458038 SEMA4BQ9NPR2 832 aaPredicted RBP19.84■□□□□ 0.77
CPNE1-220ENST00000458038 DNAJB12Q9NXW2 375 aaKnown RBP19.84■□□□□ 0.77
CPNE1-220ENST00000458038 ALKBH4Q9NXW9 302 aa19.84■□□□□ 0.77
CPNE1-220ENST00000458038 MPDZO75970 2070 aa19.83■□□□□ 0.77
CPNE1-220ENST00000458038 TCRBV9S1A1TA0A576 114 aa19.83■□□□□ 0.77
CPNE1-220ENST00000458038 OR6C76A6NM76 312 aa19.83■□□□□ 0.77
CPNE1-220ENST00000458038 KERAO60938 352 aa19.83■□□□□ 0.77
CPNE1-220ENST00000458038 NADKO95544 446 aaPredicted RBP19.83■□□□□ 0.77
CPNE1-220ENST00000458038 FBXO45P0C2W1 286 aa19.83■□□□□ 0.77
CPNE1-220ENST00000458038 CRABP2P29373 138 aa19.83■□□□□ 0.77
CPNE1-220ENST00000458038 GALNSP34059 522 aa19.83■□□□□ 0.77
CPNE1-220ENST00000458038 ADH7P40394 386 aa19.83■□□□□ 0.77
CPNE1-220ENST00000458038 DLX5P56178 289 aa19.83■□□□□ 0.77
CPNE1-220ENST00000458038 TNFRSF17Q02223 184 aa19.83■□□□□ 0.77
CPNE1-220ENST00000458038 TBCELQ5QJ74 424 aa19.83■□□□□ 0.77
CPNE1-220ENST00000458038 ADGRD1Q6QNK2 874 aa19.83■□□□□ 0.77
CPNE1-220ENST00000458038 CCDC91Q7Z6B0 441 aa19.83■□□□□ 0.77
CPNE1-220ENST00000458038 TBC1D1Q86TI0 1168 aaPredicted RBP19.83■□□□□ 0.77
CPNE1-220ENST00000458038 ISCA2Q86U28 154 aa19.83■□□□□ 0.77
CPNE1-220ENST00000458038 OR4N5Q8IXE1 308 aa19.83■□□□□ 0.77
CPNE1-220ENST00000458038 NEIL3Q8TAT5 605 aa19.83■□□□□ 0.77
CPNE1-220ENST00000458038 FOXC2Q99958 501 aa19.83■□□□□ 0.77
CPNE1-220ENST00000458038 CXXC4Q9H2H0 198 aa19.83■□□□□ 0.77
CPNE1-220ENST00000458038 OR51B5Q9H339 312 aa19.83■□□□□ 0.77
CPNE1-220ENST00000458038 ALG9Q9H6U8 611 aa19.83■□□□□ 0.77
CPNE1-220ENST00000458038 ZNF703Q9H7S9 590 aaPredicted RBP19.83■□□□□ 0.77
CPNE1-220ENST00000458038 PCDHGA11Q9Y5H2 935 aa19.83■□□□□ 0.77
CPNE1-220ENST00000458038 NCKAP5O14513 1909 aa19.82■□□□□ 0.76
CPNE1-220ENST00000458038 ANKRD33BA6NCL7 494 aa19.82■□□□□ 0.76
CPNE1-220ENST00000458038 FAM187AA6NFU0 413 aa19.82■□□□□ 0.76
CPNE1-220ENST00000458038 SYCE1LA8MT33 242 aa19.82■□□□□ 0.76
CPNE1-220ENST00000458038 CAPN14A8MX76 684 aa19.82■□□□□ 0.76
CPNE1-220ENST00000458038 AHRRA9YTQ3 701 aa19.82■□□□□ 0.76
CPNE1-220ENST00000458038 SYT5O00445 386 aa19.82■□□□□ 0.76
CPNE1-220ENST00000458038 CTAG2O75638 210 aa19.82■□□□□ 0.76
CPNE1-220ENST00000458038 PTX3P26022 381 aaPredicted RBP19.82■□□□□ 0.76
CPNE1-220ENST00000458038 GNG11P61952 73 aa19.82■□□□□ 0.76
CPNE1-220ENST00000458038 PHEXP78562 749 aa19.82■□□□□ 0.76
CPNE1-220ENST00000458038 SF3B4Q15427 424 aaKnown RBP eCLIP19.82■□□□□ 0.766e-9■■■■□ 24.3
CPNE1-220ENST00000458038 SPRED3Q2MJR0 410 aa19.82■□□□□ 0.76
CPNE1-220ENST00000458038 LIPJQ5W064 366 aa19.82■□□□□ 0.76
CPNE1-220ENST00000458038 LYPD8Q6UX82 237 aa19.82■□□□□ 0.76
CPNE1-220ENST00000458038 RNF111Q6ZNA4 994 aa19.82■□□□□ 0.76
CPNE1-220ENST00000458038 RAPH1Q70E73 1250 aa19.82■□□□□ 0.76
CPNE1-220ENST00000458038 MAATS1Q7Z4T9 603 aa19.82■□□□□ 0.76
CPNE1-220ENST00000458038 LIX1LQ8IVB5 337 aa19.82■□□□□ 0.76
CPNE1-220ENST00000458038 TAGAPQ8N103 731 aa19.82■□□□□ 0.76
CPNE1-220ENST00000458038 LIX1Q8N485 282 aa19.82■□□□□ 0.76
CPNE1-220ENST00000458038 FAM13CQ8NE31 585 aa19.82■□□□□ 0.76
CPNE1-220ENST00000458038 EXT2Q93063 718 aa19.82■□□□□ 0.76
CPNE1-220ENST00000458038 PPWD1Q96BP3 646 aaKnown RBP19.82■□□□□ 0.76
CPNE1-220ENST00000458038 ERP44Q9BS26 406 aa19.82■□□□□ 0.76
CPNE1-220ENST00000458038 LYARQ9NX58 379 aaKnown RBP19.82■□□□□ 0.76
CPNE1-220ENST00000458038 CHCHD2Q9Y6H1 151 aaPredicted RBP19.82■□□□□ 0.76
CPNE1-220ENST00000458038 ACANP16112 2415 aa19.82■□□□□ 0.76
CPNE1-220ENST00000458038 SUPT3HB4E1H0 165 aa19.81■□□□□ 0.76
CPNE1-220ENST00000458038 SAP18O00422 153 aaKnown RBP19.81■□□□□ 0.76
CPNE1-220ENST00000458038 PROM1O43490 865 aa19.81■□□□□ 0.76
CPNE1-220ENST00000458038 SUPT3HO75486 399 aa19.81■□□□□ 0.76
CPNE1-220ENST00000458038 GPR75O95800 540 aa19.81■□□□□ 0.76
CPNE1-220ENST00000458038 LTA4HP09960 611 aaKnown RBP19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms