RNA–Protein interactions for RNA: ENST00000457461.1

CUBNP3-201, Transcript of cubilin pseudogene 3, humanhuman

BASIC

Gene CUBNP3, Length 1,784 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP3-201ENST00000457461 SHKBP1Q8TBC3 707 aa6.53□□□□□ -1.36
CUBNP3-201ENST00000457461 NR4A3Q92570 626 aa6.53□□□□□ -1.36
CUBNP3-201ENST00000457461 MRPS31Q92665 395 aaKnown RBP6.53□□□□□ -1.36
CUBNP3-201ENST00000457461 BIRC7Q96CA5 298 aa6.53□□□□□ -1.36
CUBNP3-201ENST00000457461 ECHDC3Q96DC8 303 aa6.53□□□□□ -1.36
CUBNP3-201ENST00000457461 MTFMTQ96DP5 389 aaKnown RBP6.53□□□□□ -1.36
CUBNP3-201ENST00000457461 YIPF6Q96EC8 236 aa6.53□□□□□ -1.36
CUBNP3-201ENST00000457461 OR2A14Q96R47 310 aa6.53□□□□□ -1.36
CUBNP3-201ENST00000457461 P2RY13Q9BPV8 354 aa6.53□□□□□ -1.36
CUBNP3-201ENST00000457461 ERVK-6Q9BXR3 956 aa6.53□□□□□ -1.36
CUBNP3-201ENST00000457461 SLC26A1Q9H2B4 701 aa6.53□□□□□ -1.36
CUBNP3-201ENST00000457461 PDFQ9HBH1 243 aa6.53□□□□□ -1.36
CUBNP3-201ENST00000457461 PLAC1Q9HBJ0 212 aa6.53□□□□□ -1.36
CUBNP3-201ENST00000457461 SARS2Q9NP81 518 aaKnown RBP6.53□□□□□ -1.36
CUBNP3-201ENST00000457461 SPAG4Q9NPE6 437 aa6.53□□□□□ -1.36
CUBNP3-201ENST00000457461 ASAH2Q9NR71 780 aa6.53□□□□□ -1.36
CUBNP3-201ENST00000457461 TMEM181Q9P2C4 612 aa6.53□□□□□ -1.36
CUBNP3-201ENST00000457461 DUX4Q9UBX2 424 aa6.53□□□□□ -1.36
CUBNP3-201ENST00000457461 A0A075B6Q4 140 aa6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 ATP6AP2A0A1C7CYW4 349 aa6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 A0A1W2PPL8 197 aa6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 A0A1W2PPQ1 181 aa6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 A0A1W2PRB8 838 aa6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 TCAF2A6NFQ2 919 aa6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 ZNF99A8MXY4 864 aaPredicted RBP6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 FOXO6A8MYZ6 492 aa6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 DFFAO00273 331 aa6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 SCAMP3O14828 347 aaKnown RBP6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 NUDT21O43809 227 aaKnown RBP6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 RAMP2O60895 175 aa6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 SDC3O75056 442 aa6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 CLDN11O75508 207 aa6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 MED6O75586 246 aa6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 KRT33AO76009 404 aa6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 RLN2P04090 185 aa6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 ALPLP05186 524 aa6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 ERVK-10P10266 1014 aa6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 CKMT1AP12532 417 aa6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 MUC1P15941 1255 aaPredicted RBP6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 EPCAMP16422 314 aa6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 NDUFB7P17568 137 aa6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 NDUFV2P19404 249 aa6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 CRHBPP24387 322 aa6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 HTR1BP28222 390 aa6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 HOXD9P28356 352 aaPredicted RBP6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 TACR3P29371 465 aa6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 GRIA4P48058 902 aa6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 KPNA2P52292 529 aaKnown RBP6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 CDH13P55290 713 aa6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 SMAD3P84022 425 aaKnown RBP6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 SEMG2Q02383 582 aa6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 IL10RBQ08334 325 aa6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 OVGP1Q12889 678 aa6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 GPM6BQ13491 265 aa6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 SNTB1Q13884 538 aaKnown RBP6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 GPR68Q15743 365 aa6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 GPR19Q15760 415 aa6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 RFX4Q33E94 735 aa6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 TMEM35AQ53FP2 167 aa6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 PRSS36Q5K4E3 855 aa6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 FAM182AQ5T1J6 154 aa6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 SLC35F1Q5T1Q4 408 aa6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 SYT6Q5T7P8 510 aaPredicted RBP6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 FAM46CQ5VWP2 391 aa6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 STEAP4Q687X5 459 aa6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 BLOC1S3Q6QNY0 202 aa6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 ZNF783Q6ZMS7 281 aa6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 PTCHD4Q6ZW05 846 aa6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 PID1Q7Z2X4 250 aa6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 SZRD1Q7Z422 152 aa6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 GALNTL5Q7Z4T8 443 aa6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 MRPL52Q86TS9 123 aaKnown RBP6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 CCDC190Q86UF4 302 aa6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 TRIM69Q86WT6 500 aa6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 CIR1Q86X95 450 aaPredicted RBP6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 PPP1R3BQ86XI6 285 aa6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 IGDCC3Q8IVU1 814 aa6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 DNAJC22Q8N4W6 341 aa6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 PARP16Q8N5Y8 322 aa6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 C10orf53Q8N6V4 93 aa6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 ARL14EPQ8N8R7 260 aaPredicted RBP6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 MFSD9Q8NBP5 474 aa6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 FBXO36Q8NEA4 188 aa6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 MZB1Q8WU39 189 aa6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 MAFIPQ8WZ33 124 aa6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 TADA1Q96BN2 335 aa6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 ZNF707Q96C28 371 aaPredicted RBP6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 RRNAD1Q96FB5 475 aaKnown RBP6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 ZNF845Q96IR2 970 aaPredicted RBP6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 LRIG1Q96JA1 1093 aa6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 LINC00052Q96N35 136 aa6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 SFXN2Q96NB2 322 aa6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 ZNF599Q96NL3 588 aa6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 FYTTD1Q96QD9 318 aaKnown RBP6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 FCRL5Q96RD9 977 aa6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 TREX2Q9BQ50 279 aaPredicted RBP6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 PBX4Q9BYU1 374 aa6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 REXO4Q9GZR2 422 aaKnown RBP6.52□□□□□ -1.37
CUBNP3-201ENST00000457461 MAGEH1Q9H213 219 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms