RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 UPB1Q9UBR1 384 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 ABT1Q9ULW3 272 aaKnown RBP5.14□□□□□ -1.59
VPS41-209ENST00000457055 FZD1Q9UP38 647 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 CDYLQ9Y232 598 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 PCDHGB1Q9Y5G3 927 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 CSNK1G3Q9Y6M4 447 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 AKAP11Q9UKA4 1901 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 ADAMTS7Q9UKP4 1686 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 USP47Q96K76 1375 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 C4AP0C0L4 1744 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 CPSF1Q10570 1443 aaKnown RBP5.14□□□□□ -1.59
VPS41-209ENST00000457055 MYH14Q7Z406 1995 aaKnown RBP5.13□□□□□ -1.59
VPS41-209ENST00000457055 TEX13CA0A0J9YWL9 993 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 EDDM13A0A1B0GTR0 161 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 PRR23AA6NEV1 266 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 A8MUI8 341 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 GRXCR1A8MXD5 290 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 CDRT15L2A8MXV6 281 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 NPIPA7E9PJI5 369 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 HAS3O00219 553 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 BCKDKO14874 412 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 MID1O15344 667 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 SPRY1O43609 319 aaPredicted RBP5.13□□□□□ -1.59
VPS41-209ENST00000457055 AVILO75366 819 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 ERN1O75460 977 aaKnown RBP5.13□□□□□ -1.59
VPS41-209ENST00000457055 CSDE1O75534 798 aaKnown RBP5.13□□□□□ -1.59
VPS41-209ENST00000457055 STC2O76061 302 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 HAUS5O94927 633 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 BAG3O95817 575 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 ABHD16AO95870 558 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 NDUFB10O96000 172 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 RHOP08100 348 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 ELFN1P0C7U0 828 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 NPIPA8P0DM63 369 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 CBSLP0DN79 551 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 PPP3CBP16298 524 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 CTPS1P17812 591 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 TCP1P17987 556 aaKnown RBP5.13□□□□□ -1.59
VPS41-209ENST00000457055 TGM2P21980 687 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 NR4A1P22736 598 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 OR1E1P30953 314 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 CBSP35520 551 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 TGFBR2P37173 567 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 TGM4P49221 684 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 AP2S1P53680 142 aaPredicted RBP5.13□□□□□ -1.59
VPS41-209ENST00000457055 ELLP55199 621 aaPredicted RBP5.13□□□□□ -1.59
VPS41-209ENST00000457055 OR2B6P58173 313 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 PSME3P61289 254 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 ATP6V0D1P61421 351 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 TXNL4AP83876 142 aaKnown RBP5.13□□□□□ -1.59
VPS41-209ENST00000457055 HPCAP84074 193 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 BDH1Q02338 343 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 CSTF1Q05048 431 aaKnown RBP5.13□□□□□ -1.59
VPS41-209ENST00000457055 CHRNB3Q05901 458 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 PDCLQ13371 301 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 PCK2Q16822 640 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 GXYLT1Q4G148 440 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 CMPK2Q5EBM0 449 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 RAET1LQ5VY80 246 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 ALS2CLQ60I27 953 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 KCTD16Q68DU8 428 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 BRAT1Q6PJG6 821 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 NHLRC1Q6VVB1 395 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 SLC39A5Q6ZMH5 540 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 NIPA1Q7RTP0 329 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 PID1Q7Z2X4 250 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 PRSS42Q7Z5A4 293 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 LHFPL4Q7Z7J7 247 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 PRUNE1Q86TP1 453 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 AACSQ86V21 672 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 GPR180Q86V85 440 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 PRSS58Q8IYP2 241 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 ACBD4Q8NC06 268 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 TMEM116Q8NCL8 245 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 OR2L5Q8NG80 312 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 OR2D3Q8NGH3 330 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 OR2L8Q8NGY9 312 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 GRHL3Q8TE85 626 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 HSD17B8Q92506 261 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 FIG4Q92562 907 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 MAP4K1Q92918 833 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 SLCO2A1Q92959 643 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 ECHDC3Q96DC8 303 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 MTBPQ96DY7 904 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 TCEAL4Q96EI5 215 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 MRGPRX1Q96LB2 322 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 SENP8Q96LD8 212 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 MAPKAP1Q9BPZ7 522 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 INPP5KQ9BT40 448 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.13□□□□□ -1.59
VPS41-209ENST00000457055 ALG12Q9BV10 488 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 ATG10Q9H0Y0 220 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 S1PR5Q9H228 398 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 TOR3AQ9H497 397 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 NXF3Q9H4D5 531 aaKnown RBP5.13□□□□□ -1.59
VPS41-209ENST00000457055 PDZD7Q9H5P4 517 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 RANBP3Q9H6Z4 567 aaPredicted RBP5.13□□□□□ -1.59
VPS41-209ENST00000457055 ZNF160Q9HCG1 818 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 TMEM161AQ9NX61 479 aa5.13□□□□□ -1.59
VPS41-209ENST00000457055 AHSPQ9NZD4 102 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms