RNA–Protein interactions for RNA: ENST00000456331.6

PPP1R9A-208, Transcript of protein phosphatase 1 regulatory subunit 9A, humanhuman

TSL 1 (best) BASIC

Gene PPP1R9A, Length 10,090 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R9A-208ENST00000456331 SYNPOQ8N3V7 929 aa3.87□□□□□ -1.79
PPP1R9A-208ENST00000456331 STEAP2Q8NFT2 490 aa3.87□□□□□ -1.79
PPP1R9A-208ENST00000456331 DEDD2Q8WXF8 326 aa3.87□□□□□ -1.79
PPP1R9A-208ENST00000456331 BIRC7Q96CA5 298 aa3.87□□□□□ -1.79
PPP1R9A-208ENST00000456331 DDIT4LQ96D03 193 aa3.87□□□□□ -1.79
PPP1R9A-208ENST00000456331 LGALS12Q96DT0 336 aa3.87□□□□□ -1.79
PPP1R9A-208ENST00000456331 L3HYPDHQ96EM0 354 aa3.87□□□□□ -1.79
PPP1R9A-208ENST00000456331 LMF2Q9BU23 707 aaKnown RBP3.87□□□□□ -1.79
PPP1R9A-208ENST00000456331 EIF5A2Q9GZV4 153 aaKnown RBP3.87□□□□□ -1.79
PPP1R9A-208ENST00000456331 CCSER2Q9H7U1 834 aa3.87□□□□□ -1.79
PPP1R9A-208ENST00000456331 RXFP3Q9NSD7 469 aa3.87□□□□□ -1.79
PPP1R9A-208ENST00000456331 EIF2B4Q9UI10 523 aaKnown RBP3.87□□□□□ -1.79
PPP1R9A-208ENST00000456331 MYH1P12882 1939 aa3.87□□□□□ -1.79
PPP1R9A-208ENST00000456331 MYH2Q9UKX2 1941 aa3.87□□□□□ -1.79
PPP1R9A-208ENST00000456331 MYH4Q9Y623 1939 aa3.87□□□□□ -1.79
PPP1R9A-208ENST00000456331 hCG_2039718K7EN88 272 aa3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 MANBAO00462 879 aa3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 RFPL2O75678 378 aa3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 RFPL3O75679 317 aa3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 LY86O95711 162 aa3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 RPS3P23396 243 aaKnown RBP eCLIP3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 NFYAP23511 347 aaPredicted RBP3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 CD6P30203 668 aa3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 DAP3P51398 398 aaKnown RBP3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 CLDN8P56748 225 aa3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 MAXP61244 160 aa3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 ARHGAP19Q14CB8 494 aa3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 CNN3Q15417 329 aaKnown RBP3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 SCML4Q8N228 414 aa3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 OR1J4Q8NGS1 313 aa3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 PROKR1Q8TCW9 393 aa3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 MFSD3Q96ES6 412 aa3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 NPLQ9BXD5 320 aaPredicted RBP3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 RNF208Q9H0X6 261 aa3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 ZDHHC7Q9NXF8 308 aa3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 EXTL2Q9UBQ6 330 aa3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 ARL5AQ9Y689 179 aa3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 MRC1P22897 1456 aa3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 KIAA0355O15063 1070 aa3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 ECI2O75521 394 aa3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 EGFP01133 1207 aa3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 CKMT1AP12532 417 aa3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 NDUFV2P19404 249 aa3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 AHCYP23526 432 aa3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 CHRNB4P30926 498 aa3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 MC3RP41968 323 aa3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 CREB5Q02930 508 aa3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 FUT2Q10981 343 aa3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 GK2Q14410 553 aaPredicted RBP3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 GRM2Q14416 872 aa3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 CD300LGQ6UXG3 332 aa3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 TRIM46Q7Z4K8 759 aa3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 ZNF366Q8N895 744 aa3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 OR10T2Q8NGX3 314 aa3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 OR8K5Q8NH50 307 aa3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 HSH2DQ96JZ2 352 aa3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 LMLNQ96KR4 655 aa3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 CNTNAP3BQ96NU0 1288 aa3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 PATZ1Q9HBE1 687 aaKnown RBP3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 GNG8Q9UK08 70 aa3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 NAALAD2Q9Y3Q0 740 aa3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 CACNA1CQ13936 2221 aa3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 KCNQ2O43526 872 aa3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 TGM5O43548 720 aa3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 OR2T1O43869 369 aa3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 ADAMTS4O75173 837 aa3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 RBMS1P29558 406 aaKnown RBP3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 CCND3P30281 292 aaPredicted RBP3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 FOXK1P85037 733 aa3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 RPL6Q02878 288 aaKnown RBP3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 TGFBIQ15582 683 aa3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 C6orf141Q5SZD1 244 aa3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 AKR1C8PQ5T2L2 129 aa3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 LINGO4Q6UY18 593 aa3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 GAREM2Q75VX8 874 aa3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 SMIM15Q7Z3B0 74 aa3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 SGPP2Q8IWX5 399 aa3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 OR14C36Q8NHC7 312 aa3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 SFXN2Q96NB2 322 aa3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 LRFN5Q96NI6 719 aa3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 HERPUD2Q9BSE4 406 aa3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 ANKRD60Q9BZ19 345 aa3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 LDAHQ9H6V9 325 aa3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 MTHFD2LQ9H903 347 aaPredicted RBP3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 BIN3Q9NQY0 253 aa3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 HSFX1Q9UBD0 423 aa3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 TIMM22Q9Y584 194 aa3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 A3GALT2U3KPV4 340 aa3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 ATP6V1G2-DDX39BF2Z307 99 aa3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 TMEM63AO94886 807 aa3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 BCHEP06276 602 aa3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 H2BFMP0C1H6 154 aa3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 TRAPPC2P0DI81 140 aa3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 TRAPPC2BP0DI82 140 aa3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 ALAS2P22557 587 aa3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 TCEA1P23193 301 aaKnown RBP3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 SLC6A9P48067 706 aa3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 MARCKSL1P49006 195 aa3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 TAS2R30P59541 319 aa3.86□□□□□ -1.79
PPP1R9A-208ENST00000456331 CD83Q01151 205 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms