RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 SLC45A3Q96JT2 553 aa10.56□□□□□ -0.72
TRAF4-206ENST00000454852 CCDC115Q96NT0 180 aa10.56□□□□□ -0.72
TRAF4-206ENST00000454852 PHF12Q96QT6 1004 aa10.56□□□□□ -0.72
TRAF4-206ENST00000454852 OR52E6Q96RD3 313 aa10.56□□□□□ -0.72
TRAF4-206ENST00000454852 TUBB6Q9BUF5 446 aa10.56□□□□□ -0.72
TRAF4-206ENST00000454852 VN1R1Q9GZP7 353 aa10.56□□□□□ -0.72
TRAF4-206ENST00000454852 SLAMF7Q9NQ25 335 aa10.56□□□□□ -0.72
TRAF4-206ENST00000454852 SERHLQ9NQF3 203 aa10.56□□□□□ -0.72
TRAF4-206ENST00000454852 GIMAP4Q9NUV9 329 aa10.56□□□□□ -0.72
TRAF4-206ENST00000454852 SH3BP4Q9P0V3 963 aa10.56□□□□□ -0.72
TRAF4-206ENST00000454852 GPN3Q9UHW5 284 aaPredicted RBP10.56□□□□□ -0.72
TRAF4-206ENST00000454852 ENTPD4Q9Y227 616 aa10.56□□□□□ -0.72
TRAF4-206ENST00000454852 PADI2Q9Y2J8 665 aa10.56□□□□□ -0.72
TRAF4-206ENST00000454852 NDUFAF1Q9Y375 327 aa10.56□□□□□ -0.72
TRAF4-206ENST00000454852 ZNF780BQ9Y6R6 833 aa10.56□□□□□ -0.72
TRAF4-206ENST00000454852 LOC102723996A0A087X1L8 192 aa10.55□□□□□ -0.72
TRAF4-206ENST00000454852 GLOD5A6NK44 160 aa10.55□□□□□ -0.72
TRAF4-206ENST00000454852 WASHC1A8K0Z3 465 aa10.55□□□□□ -0.72
TRAF4-206ENST00000454852 IDSB3KWA1 339 aa10.55□□□□□ -0.72
TRAF4-206ENST00000454852 TGFBR3LH3BV60 316 aa10.55□□□□□ -0.72
TRAF4-206ENST00000454852 PLOD2O00469 737 aa10.55□□□□□ -0.72
TRAF4-206ENST00000454852 B4GALT2O60909 372 aa10.55□□□□□ -0.72
TRAF4-206ENST00000454852 LDB3O75112 727 aa10.55□□□□□ -0.72
TRAF4-206ENST00000454852 ZCCHC18P0CG32 403 aa10.55□□□□□ -0.72
TRAF4-206ENST00000454852 PORP16435 677 aaPredicted RBP10.55□□□□□ -0.72
TRAF4-206ENST00000454852 HOXB9P17482 250 aaPredicted RBP10.55□□□□□ -0.72
TRAF4-206ENST00000454852 PTPN6P29350 595 aa10.55□□□□□ -0.72
TRAF4-206ENST00000454852 NTSP30990 170 aa10.55□□□□□ -0.72
TRAF4-206ENST00000454852 MPIP34949 423 aa10.55□□□□□ -0.72
TRAF4-206ENST00000454852 STT3AP46977 705 aa10.55□□□□□ -0.72
TRAF4-206ENST00000454852 TRPC1P48995 793 aa10.55□□□□□ -0.72
TRAF4-206ENST00000454852 XKP51811 444 aa10.55□□□□□ -0.72
TRAF4-206ENST00000454852 DGKQP52824 942 aa10.55□□□□□ -0.72
TRAF4-206ENST00000454852 BTG2P78543 158 aa10.55□□□□□ -0.72
TRAF4-206ENST00000454852 SLC13A2Q13183 592 aa10.55□□□□□ -0.72
TRAF4-206ENST00000454852 CYLC2Q14093 348 aaPredicted RBP10.55□□□□□ -0.72
TRAF4-206ENST00000454852 ERV3-1Q14264 604 aa10.55□□□□□ -0.72
TRAF4-206ENST00000454852 VPS26BQ4G0F5 336 aa10.55□□□□□ -0.72
TRAF4-206ENST00000454852 TIGD2Q4W5G0 525 aa10.55□□□□□ -0.72
TRAF4-206ENST00000454852 LRIF1Q5T3J3 769 aa10.55□□□□□ -0.72
TRAF4-206ENST00000454852 MLIPQ5VWP3 458 aa10.55□□□□□ -0.72
TRAF4-206ENST00000454852 OR4F3Q6IEY1 312 aa10.55□□□□□ -0.72
TRAF4-206ENST00000454852 ANKRD26P1Q6NSI1 321 aa10.55□□□□□ -0.72
TRAF4-206ENST00000454852 FAM199XQ6PEV8 388 aaPredicted RBP10.55□□□□□ -0.72
TRAF4-206ENST00000454852 HACD2Q6Y1H2 254 aa10.55□□□□□ -0.72
TRAF4-206ENST00000454852 LAPTM4BQ86VI4 370 aa10.55□□□□□ -0.72
TRAF4-206ENST00000454852 SNX32Q86XE0 403 aa10.55□□□□□ -0.72
TRAF4-206ENST00000454852 LRRC25Q8N386 305 aaPredicted RBP10.55□□□□□ -0.72
TRAF4-206ENST00000454852 ENDOVQ8N8Q3 282 aaKnown RBP10.55□□□□□ -0.72
TRAF4-206ENST00000454852 ZFP28Q8NHY6 868 aa10.55□□□□□ -0.72
TRAF4-206ENST00000454852 NUDT8Q8WV74 236 aa10.55□□□□□ -0.72
TRAF4-206ENST00000454852 GTF2H4Q92759 462 aa10.55□□□□□ -0.72
TRAF4-206ENST00000454852 EXOSC8Q96B26 276 aaKnown RBP10.55□□□□□ -0.72
TRAF4-206ENST00000454852 PTCHD1Q96NR3 888 aa10.55□□□□□ -0.72
TRAF4-206ENST00000454852 AMDHD1Q96NU7 426 aa10.55□□□□□ -0.72
TRAF4-206ENST00000454852 RMND5AQ9H871 391 aa10.55□□□□□ -0.72
TRAF4-206ENST00000454852 NEUROD4Q9HD90 331 aa10.55□□□□□ -0.72
TRAF4-206ENST00000454852 NECTIN3Q9NQS3 549 aa10.55□□□□□ -0.72
TRAF4-206ENST00000454852 SEMA3GQ9NS98 782 aa10.55□□□□□ -0.72
TRAF4-206ENST00000454852 NTMQ9P121 344 aa10.55□□□□□ -0.72
TRAF4-206ENST00000454852 C5AR2Q9P296 337 aa10.55□□□□□ -0.72
TRAF4-206ENST00000454852 TAGLN3Q9UI15 199 aa10.55□□□□□ -0.72
TRAF4-206ENST00000454852 LEF1Q9UJU2 399 aaPredicted RBP10.55□□□□□ -0.72
TRAF4-206ENST00000454852 KCND3Q9UK17 655 aa10.55□□□□□ -0.72
TRAF4-206ENST00000454852 PPIEQ9UNP9 301 aaKnown RBP10.55□□□□□ -0.72
TRAF4-206ENST00000454852 TRBV5-3A0A0A0MS03 114 aa10.54□□□□□ -0.72
TRAF4-206ENST00000454852 A0A1W2PRB8 838 aa10.54□□□□□ -0.72
TRAF4-206ENST00000454852 C9JVG2 144 aa10.54□□□□□ -0.72
TRAF4-206ENST00000454852 NR5A2O00482 541 aa10.54□□□□□ -0.72
TRAF4-206ENST00000454852 FBP2O00757 339 aa10.54□□□□□ -0.72
TRAF4-206ENST00000454852 ANGPT2O15123 496 aa10.54□□□□□ -0.72
TRAF4-206ENST00000454852 ALOX12BO75342 701 aa10.54□□□□□ -0.72
TRAF4-206ENST00000454852 ERN1O75460 977 aaKnown RBP10.54□□□□□ -0.72
TRAF4-206ENST00000454852 ERAL1O75616 437 aaKnown RBP10.54□□□□□ -0.72
TRAF4-206ENST00000454852 UMODP07911 640 aa10.54□□□□□ -0.72
TRAF4-206ENST00000454852 T-ENOLP0DO92 83 aa10.54□□□□□ -0.72
TRAF4-206ENST00000454852 TCN2P20062 427 aa10.54□□□□□ -0.72
TRAF4-206ENST00000454852 CALB2P22676 271 aa10.54□□□□□ -0.72
TRAF4-206ENST00000454852 PTPN4P29074 926 aa10.54□□□□□ -0.72
TRAF4-206ENST00000454852 MNAT1P51948 309 aa10.54□□□□□ -0.72
TRAF4-206ENST00000454852 EMP2P54851 167 aa10.54□□□□□ -0.72
TRAF4-206ENST00000454852 RPS15P62841 145 aaKnown RBP10.54□□□□□ -0.72
TRAF4-206ENST00000454852 PLIN5Q00G26 463 aa10.54□□□□□ -0.72
TRAF4-206ENST00000454852 DUSP2Q05923 314 aa10.54□□□□□ -0.72
TRAF4-206ENST00000454852 MGAT2Q10469 447 aa10.54□□□□□ -0.72
TRAF4-206ENST00000454852 STX4Q12846 297 aa10.54□□□□□ -0.72
TRAF4-206ENST00000454852 MAP4K2Q12851 820 aa10.54□□□□□ -0.72
TRAF4-206ENST00000454852 DNASE1L3Q13609 305 aa10.54□□□□□ -0.72
TRAF4-206ENST00000454852 COL9A2Q14055 689 aaPredicted RBP10.54□□□□□ -0.72
TRAF4-206ENST00000454852 MAPKAPK3Q16644 382 aa10.54□□□□□ -0.72
TRAF4-206ENST00000454852 SPRED3Q2MJR0 410 aa10.54□□□□□ -0.72
TRAF4-206ENST00000454852 PGS1Q32NB8 556 aa10.54□□□□□ -0.72
TRAF4-206ENST00000454852 MINDY4Q4G0A6 757 aa10.54□□□□□ -0.72
TRAF4-206ENST00000454852 TMEM64Q6YI46 380 aa10.54□□□□□ -0.72
TRAF4-206ENST00000454852 RETREG3Q86VR2 466 aa10.54□□□□□ -0.72
TRAF4-206ENST00000454852 CIDECQ96AQ7 238 aaPredicted RBP10.54□□□□□ -0.72
TRAF4-206ENST00000454852 VPS33AQ96AX1 596 aa10.54□□□□□ -0.72
TRAF4-206ENST00000454852 ROPN1LQ96C74 230 aa10.54□□□□□ -0.72
TRAF4-206ENST00000454852 CTHRC1Q96CG8 243 aa10.54□□□□□ -0.72
TRAF4-206ENST00000454852 ITCHQ96J02 903 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms