RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 RPF2Q9H7B2 306 aaKnown RBP5.65□□□□□ -1.5
SDC4P-201ENST00000453285 DCLRE1BQ9H816 532 aa5.65□□□□□ -1.5
SDC4P-201ENST00000453285 RNPEPL1Q9HAU8 725 aa5.65□□□□□ -1.5
SDC4P-201ENST00000453285 CLK4Q9HAZ1 481 aaKnown RBP5.65□□□□□ -1.5
SDC4P-201ENST00000453285 S100A14Q9HCY8 104 aa5.65□□□□□ -1.5
SDC4P-201ENST00000453285 PARD6AQ9NPB6 346 aa5.65□□□□□ -1.5
SDC4P-201ENST00000453285 FGF21Q9NSA1 209 aa5.65□□□□□ -1.5
SDC4P-201ENST00000453285 CUTCQ9NTM9 273 aa5.65□□□□□ -1.5
SDC4P-201ENST00000453285 SIDT1Q9NXL6 827 aaKnown RBP5.65□□□□□ -1.5
SDC4P-201ENST00000453285 ACSL6Q9UKU0 697 aa5.65□□□□□ -1.5
SDC4P-201ENST00000453285 PCDHGB4Q9UN71 923 aa5.65□□□□□ -1.5
SDC4P-201ENST00000453285 CLDN16Q9Y5I7 305 aa5.65□□□□□ -1.5
SDC4P-201ENST00000453285 SNX13Q9Y5W8 968 aa5.65□□□□□ -1.5
SDC4P-201ENST00000453285 CNOT1A5YKK6 2376 aaKnown RBP5.65□□□□□ -1.51
SDC4P-201ENST00000453285 DOCK10Q96BY6 2186 aa5.65□□□□□ -1.51
SDC4P-201ENST00000453285 FAM186AA6NE01 2351 aa5.64□□□□□ -1.51
SDC4P-201ENST00000453285 RNF103-CHMP3A0A140T963 221 aa5.64□□□□□ -1.51
SDC4P-201ENST00000453285 ELOVL7A1L3X0 281 aa5.64□□□□□ -1.51
SDC4P-201ENST00000453285 AQP12BA6NM10 295 aa5.64□□□□□ -1.51
SDC4P-201ENST00000453285 D6RAR5 112 aa5.64□□□□□ -1.51
SDC4P-201ENST00000453285 H0Y3Z8 333 aa5.64□□□□□ -1.51
SDC4P-201ENST00000453285 H0YIG0 161 aa5.64□□□□□ -1.51
SDC4P-201ENST00000453285 TGFBR3LH3BV60 316 aa5.64□□□□□ -1.51
SDC4P-201ENST00000453285 DSCR3O14972 297 aa5.64□□□□□ -1.51
SDC4P-201ENST00000453285 NVLO15381 856 aaKnown RBP5.64□□□□□ -1.51
SDC4P-201ENST00000453285 FGF17O60258 216 aa5.64□□□□□ -1.51
SDC4P-201ENST00000453285 LDB3O75112 727 aa5.64□□□□□ -1.51
SDC4P-201ENST00000453285 GCM2O75603 506 aaPredicted RBP5.64□□□□□ -1.51
SDC4P-201ENST00000453285 GPR75O95800 540 aa5.64□□□□□ -1.51
SDC4P-201ENST00000453285 LMNAP02545 664 aaKnown RBP5.64□□□□□ -1.51
SDC4P-201ENST00000453285 NTRK1P04629 796 aa5.64□□□□□ -1.51
SDC4P-201ENST00000453285 NUDT7P0C024 238 aa5.64□□□□□ -1.51
SDC4P-201ENST00000453285 RNH1P13489 461 aaKnown RBP5.64□□□□□ -1.51
SDC4P-201ENST00000453285 ETFAP13804 333 aa5.64□□□□□ -1.51
SDC4P-201ENST00000453285 CPMP14384 443 aa5.64□□□□□ -1.51
SDC4P-201ENST00000453285 PPIBP23284 216 aaKnown RBP5.64□□□□□ -1.51
SDC4P-201ENST00000453285 TLX1P31314 330 aaPredicted RBP5.64□□□□□ -1.51
SDC4P-201ENST00000453285 MPIP34949 423 aa5.64□□□□□ -1.51
SDC4P-201ENST00000453285 PTGER1P34995 402 aa5.64□□□□□ -1.51
SDC4P-201ENST00000453285 SOX11P35716 441 aa5.64□□□□□ -1.51
SDC4P-201ENST00000453285 AVPR1BP47901 424 aa5.64□□□□□ -1.51
SDC4P-201ENST00000453285 CCT3P49368 545 aaKnown RBP5.64□□□□□ -1.51
SDC4P-201ENST00000453285 ARL4DP49703 201 aa5.64□□□□□ -1.51
SDC4P-201ENST00000453285 XKP51811 444 aa5.64□□□□□ -1.51
SDC4P-201ENST00000453285 NCBP2P52298 156 aaKnown RBP eCLIP5.64□□□□□ -1.51
SDC4P-201ENST00000453285 PDX1P52945 283 aa5.64□□□□□ -1.51
SDC4P-201ENST00000453285 ITGA1P56199 1179 aa5.64□□□□□ -1.51
SDC4P-201ENST00000453285 IGLV3-21P80748 117 aaPredicted RBP5.64□□□□□ -1.51
SDC4P-201ENST00000453285 ACY1Q03154 408 aa5.64□□□□□ -1.51
SDC4P-201ENST00000453285 FOLH1Q04609 750 aa5.64□□□□□ -1.51
SDC4P-201ENST00000453285 EEF1A2Q05639 463 aaKnown RBP5.64□□□□□ -1.51
SDC4P-201ENST00000453285 VAC14Q08AM6 782 aa5.64□□□□□ -1.51
SDC4P-201ENST00000453285 SPEM2Q0P670 501 aa5.64□□□□□ -1.51
SDC4P-201ENST00000453285 MGAT2Q10469 447 aa5.64□□□□□ -1.51
SDC4P-201ENST00000453285 HSPB3Q12988 150 aa5.64□□□□□ -1.51
SDC4P-201ENST00000453285 TRA2AQ13595 282 aaKnown RBP eCLIP5.64□□□□□ -1.51
SDC4P-201ENST00000453285 ERV3-1Q14264 604 aa5.64□□□□□ -1.51
SDC4P-201ENST00000453285 RCN1Q15293 331 aa5.64□□□□□ -1.51
SDC4P-201ENST00000453285 LTB4RQ15722 352 aa5.64□□□□□ -1.51
SDC4P-201ENST00000453285 CSRP2Q16527 193 aa5.64□□□□□ -1.51
SDC4P-201ENST00000453285 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.64□□□□□ -1.51
SDC4P-201ENST00000453285 FHL5Q5TD97 284 aa5.64□□□□□ -1.51
SDC4P-201ENST00000453285 YOD1Q5VVQ6 348 aaPredicted RBP5.64□□□□□ -1.51
SDC4P-201ENST00000453285 CYP2R1Q6VVX0 501 aa5.64□□□□□ -1.51
SDC4P-201ENST00000453285 TMEM64Q6YI46 380 aa5.64□□□□□ -1.51
SDC4P-201ENST00000453285 PRR23CQ6ZRP0 262 aa5.64□□□□□ -1.51
SDC4P-201ENST00000453285 C6orf120Q7Z4R8 191 aa5.64□□□□□ -1.51
SDC4P-201ENST00000453285 B3GNT8Q7Z7M8 397 aa5.64□□□□□ -1.51
SDC4P-201ENST00000453285 SPATA24Q86W54 205 aa5.64□□□□□ -1.51
SDC4P-201ENST00000453285 PROSER1Q86XN7 944 aa5.64□□□□□ -1.51
SDC4P-201ENST00000453285 SPPL2CQ8IUH8 684 aa5.64□□□□□ -1.51
SDC4P-201ENST00000453285 OR4N5Q8IXE1 308 aa5.64□□□□□ -1.51
SDC4P-201ENST00000453285 AQP12AQ8IXF9 295 aa5.64□□□□□ -1.51
SDC4P-201ENST00000453285 TRIML2Q8N7C3 387 aa5.64□□□□□ -1.51
SDC4P-201ENST00000453285 TTC29Q8NA56 475 aaPredicted RBP5.64□□□□□ -1.51
SDC4P-201ENST00000453285 GOLM1Q8NBJ4 401 aa5.64□□□□□ -1.51
SDC4P-201ENST00000453285 RCBTB1Q8NDN9 531 aa5.64□□□□□ -1.51
SDC4P-201ENST00000453285 OR2T12Q8NG77 320 aa5.64□□□□□ -1.51
SDC4P-201ENST00000453285 OR4K14Q8NGD5 310 aa5.64□□□□□ -1.51
SDC4P-201ENST00000453285 OR52E4Q8NGH9 312 aa5.64□□□□□ -1.51
SDC4P-201ENST00000453285 OR5AK3PQ8NH89 298 aa5.64□□□□□ -1.51
SDC4P-201ENST00000453285 ZFP28Q8NHY6 868 aa5.64□□□□□ -1.51
SDC4P-201ENST00000453285 FAM110BQ8TC76 370 aa5.64□□□□□ -1.51
SDC4P-201ENST00000453285 PNPT1Q8TCS8 783 aaKnown RBP5.64□□□□□ -1.51
SDC4P-201ENST00000453285 NETO1Q8TDF5 533 aa5.64□□□□□ -1.51
SDC4P-201ENST00000453285 SLC26A7Q8TE54 656 aa5.64□□□□□ -1.51
SDC4P-201ENST00000453285 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.64□□□□□ -1.51
SDC4P-201ENST00000453285 PYDC1Q8WXC3 89 aa5.64□□□□□ -1.51
SDC4P-201ENST00000453285 N4BP2L2Q92802 583 aaPredicted RBP5.64□□□□□ -1.51
SDC4P-201ENST00000453285 TANKQ92844 425 aa5.64□□□□□ -1.51
SDC4P-201ENST00000453285 ELP4Q96EB1 424 aa5.64□□□□□ -1.51
SDC4P-201ENST00000453285 NEURL3Q96EH8 262 aa5.64□□□□□ -1.51
SDC4P-201ENST00000453285 MVB12AQ96EY5 273 aa5.64□□□□□ -1.51
SDC4P-201ENST00000453285 MMABQ96EY8 250 aaPredicted RBP5.64□□□□□ -1.51
SDC4P-201ENST00000453285 PEX11GQ96HA9 241 aa5.64□□□□□ -1.51
SDC4P-201ENST00000453285 REXO5Q96IC2 774 aaKnown RBP5.64□□□□□ -1.51
SDC4P-201ENST00000453285 BBS4Q96RK4 519 aa5.64□□□□□ -1.51
SDC4P-201ENST00000453285 GFM1Q96RP9 751 aaKnown RBP5.64□□□□□ -1.51
SDC4P-201ENST00000453285 DPH2Q9BQC3 489 aaPredicted RBP5.64□□□□□ -1.51
SDC4P-201ENST00000453285 SPATA9Q9BWV2 254 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms