RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 ADAM23O75077 832 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 PRLP01236 227 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 SERPINE1P05121 402 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 POU2F1P14859 743 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 FPR1P21462 350 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 ENTPD1P49961 510 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 TBPL1P62380 186 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 CEBPEQ15744 281 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 B3GNTL1Q67FW5 361 aaPredicted RBP5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 OR4D9Q8NGE8 314 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 NUDT22Q9BRQ3 303 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 GPR87Q9BY21 358 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 SLC19A3Q9BZV2 496 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 NRSN2Q9GZP1 204 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 FER1L5A0AVI2 2057 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 PCDH7O60245 1069 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 PAICSP22234 425 aaKnown RBP5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 HADHBP55084 474 aaKnown RBP5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 TERF2Q15554 542 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 PRAMEF20Q5VT98 475 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 GALNT16Q8N428 558 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 DNASE2BQ8WZ79 361 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 VIRMAQ69YN4 1812 aaKnown RBP5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 EME2A4GXA9 379 aaPredicted RBP5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 BCAS2O75934 225 aaPredicted RBP5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 UGT2B7P16662 529 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 PEX19P40855 299 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 SLC19A1P41440 591 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 KIR3DL1P43629 444 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 RGRP47804 291 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 XKP51811 444 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 DPTQ07507 201 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 RASGEF1BQ0VAM2 473 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 FRG2Q64ET8 278 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 FAM47BQ8NA70 645 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 NDNFQ8TB73 568 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 PATE1Q8WXA2 126 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 FRG2BQ96QU4 278 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 UTS2RQ9UKP6 389 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 E9PBE3 544 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 AREL1O15033 823 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 PPIHO43447 177 aaKnown RBP5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 ALOX12BO75342 701 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 HAUS5O94927 633 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 SOX30O94993 753 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 NR1D1P20393 614 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 DCDC1P59894 354 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 KLC1Q07866 573 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 CDC20Q12834 499 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 PGM2L1Q6PCE3 622 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 NELL1Q92832 810 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 GPER1Q99527 375 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 COQ7Q99807 217 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 CCT7Q99832 543 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 ENKD1Q9H0I2 346 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 TFB2MQ9H5Q4 396 aaKnown RBP5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 KIR3DX1Q9H7L2 352 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 ARPC4-TTLL3A0A0A6YYG9 625 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 IQCMA0A1B0GVH7 501 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 VSTM2BA6NLU5 285 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 FAM220BPB1ANY3 271 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 AHSA1O95433 338 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 GSTM2P28161 218 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 PTPN4P29074 926 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 S100GP29377 79 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 RFC3P40938 356 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 PRLHRP49683 370 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 LIMK2P53671 638 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 PMPCAQ10713 525 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 KCNAB1Q14722 419 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 NNATQ16517 81 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 KLHL22Q53GT1 634 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 ACSBG2Q5FVE4 666 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 C1QL3Q5VWW1 255 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 CMC1Q7Z7K0 106 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 PIH1D2Q8WWB5 315 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 OXNAD1Q96HP4 312 aaPredicted RBP5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 BOD1Q96IK1 185 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 RPF2Q9H7B2 306 aaKnown RBP5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 CALHM2Q9HA72 323 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 OXSMQ9NWU1 459 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 TBC1D29Q9UFV1 150 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 IGLV3-10A0A075B6K4 115 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 SH2D7A6NKC9 451 aaPredicted RBP5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 B8ZZF3 427 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 C21orf140B9A014 251 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 NR5A2O00482 541 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 PCDH17O14917 1159 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 ZNF682O95780 498 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 GSTT2P0CG29 244 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 GSTT2BP0CG30 244 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 TSPAN8P19075 237 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 CLRN1P58418 232 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 PCDH1Q08174 1060 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 GGTLC2Q14390 218 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 IGFBP7Q16270 282 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 ATG16L2Q8NAA4 619 aa5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 ZNF418Q8TF45 676 aaPredicted RBP5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 SPRYD4Q8WW59 207 aaPredicted RBP5.34□□□□□ -1.55
CDC42BPA-209ENST00000448940 ZC3H10Q96K80 434 aaKnown RBP5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms