RNA–Protein interactions for RNA: ENST00000448905.6

HMGB3-204, Transcript of high mobility group box 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGB3, Length 812 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-204ENST00000448905 ALOX15P16050 662 aaPredicted RBP12.25□□□□□ -0.45
HMGB3-204ENST00000448905 EPB42P16452 691 aa12.25□□□□□ -0.45
HMGB3-204ENST00000448905 GP5P40197 560 aa12.25□□□□□ -0.45
HMGB3-204ENST00000448905 ARFIP1P53367 373 aa12.25□□□□□ -0.45
HMGB3-204ENST00000448905 DLX5P56178 289 aa12.25□□□□□ -0.45
HMGB3-204ENST00000448905 RAB10P61026 200 aa12.25□□□□□ -0.45
HMGB3-204ENST00000448905 PHEXP78562 749 aa12.25□□□□□ -0.45
HMGB3-204ENST00000448905 CBLBQ13191 982 aa12.25□□□□□ -0.45
HMGB3-204ENST00000448905 GRTP1Q5TC63 336 aa12.25□□□□□ -0.45
HMGB3-204ENST00000448905 FBXW10Q5XX13 1052 aa12.25□□□□□ -0.45
HMGB3-204ENST00000448905 ZNF793Q6ZN11 406 aa12.25□□□□□ -0.45
HMGB3-204ENST00000448905 CAPN12Q6ZSI9 719 aa12.25□□□□□ -0.45
HMGB3-204ENST00000448905 C3orf62Q6ZUJ4 267 aa12.25□□□□□ -0.45
HMGB3-204ENST00000448905 MAATS1Q7Z4T9 603 aa12.25□□□□□ -0.45
HMGB3-204ENST00000448905 TGIF2LYQ8IUE0 185 aa12.25□□□□□ -0.45
HMGB3-204ENST00000448905 ZZZ3Q8IYH5 903 aa12.25□□□□□ -0.45
HMGB3-204ENST00000448905 PM20D2Q8IYS1 436 aa12.25□□□□□ -0.45
HMGB3-204ENST00000448905 ST13P4Q8IZP2 240 aaPredicted RBP12.25□□□□□ -0.45
HMGB3-204ENST00000448905 OR7G3Q8NG95 312 aa12.25□□□□□ -0.45
HMGB3-204ENST00000448905 NEIL3Q8TAT5 605 aa12.25□□□□□ -0.45
HMGB3-204ENST00000448905 FAM222BQ8WU58 562 aa12.25□□□□□ -0.45
HMGB3-204ENST00000448905 RIT1Q92963 219 aa12.25□□□□□ -0.45
HMGB3-204ENST00000448905 UBXN10Q96LJ8 280 aa12.25□□□□□ -0.45
HMGB3-204ENST00000448905 WDR83Q9BRX9 315 aaKnown RBP12.25□□□□□ -0.45
HMGB3-204ENST00000448905 MCMBPQ9BTE3 642 aa12.25□□□□□ -0.45
HMGB3-204ENST00000448905 DOHHQ9BU89 302 aa12.25□□□□□ -0.45
HMGB3-204ENST00000448905 TMUB1Q9BVT8 246 aa12.25□□□□□ -0.45
HMGB3-204ENST00000448905 SEMA4BQ9NPR2 832 aaPredicted RBP12.25□□□□□ -0.45
HMGB3-204ENST00000448905 RASSF1Q9NS23 344 aa12.25□□□□□ -0.45
HMGB3-204ENST00000448905 ZNF629Q9UEG4 869 aaPredicted RBP12.25□□□□□ -0.45
HMGB3-204ENST00000448905 ST6GALNAC2Q9UJ37 374 aa12.25□□□□□ -0.45
HMGB3-204ENST00000448905 SNX24Q9Y343 169 aa12.25□□□□□ -0.45
HMGB3-204ENST00000448905 PCDHGA11Q9Y5H2 935 aa12.25□□□□□ -0.45
HMGB3-204ENST00000448905 SAR1BQ9Y6B6 198 aa12.25□□□□□ -0.45
HMGB3-204ENST00000448905 CACNA1CQ13936 2221 aa12.25□□□□□ -0.45
HMGB3-204ENST00000448905 ANKRD33BA6NCL7 494 aa12.24□□□□□ -0.45
HMGB3-204ENST00000448905 K7EPI3 171 aa12.24□□□□□ -0.45
HMGB3-204ENST00000448905 SAP18O00422 153 aaKnown RBP12.24□□□□□ -0.45
HMGB3-204ENST00000448905 EIF3HO15372 352 aaKnown RBP eCLIP12.24□□□□□ -0.45
HMGB3-204ENST00000448905 PHGDHO43175 533 aaKnown RBP12.24□□□□□ -0.45
HMGB3-204ENST00000448905 FGF17O60258 216 aa12.24□□□□□ -0.45
HMGB3-204ENST00000448905 ZNF354AO60765 605 aaPredicted RBP12.24□□□□□ -0.45
HMGB3-204ENST00000448905 PRAMEF4O60810 478 aa12.24□□□□□ -0.45
HMGB3-204ENST00000448905 SH3BGRLO75368 114 aa12.24□□□□□ -0.45
HMGB3-204ENST00000448905 SNX4O95219 450 aa12.24□□□□□ -0.45
HMGB3-204ENST00000448905 GPR75O95800 540 aa12.24□□□□□ -0.45
HMGB3-204ENST00000448905 EPPINO95925 133 aa12.24□□□□□ -0.45
HMGB3-204ENST00000448905 C1QAP02745 245 aa12.24□□□□□ -0.45
HMGB3-204ENST00000448905 IGKV3-11P04433 115 aa12.24□□□□□ -0.45
HMGB3-204ENST00000448905 CD22P20273 847 aa12.24□□□□□ -0.45
HMGB3-204ENST00000448905 CRABP2P29373 138 aa12.24□□□□□ -0.45
HMGB3-204ENST00000448905 ADH7P40394 386 aa12.24□□□□□ -0.45
HMGB3-204ENST00000448905 PIK3CBP42338 1070 aa12.24□□□□□ -0.45
HMGB3-204ENST00000448905 DGKQP52824 942 aa12.24□□□□□ -0.45
HMGB3-204ENST00000448905 RPP38P78345 283 aaKnown RBP12.24□□□□□ -0.45
HMGB3-204ENST00000448905 IGLV3-21P80748 117 aaPredicted RBP12.24□□□□□ -0.45
HMGB3-204ENST00000448905 PCDH1Q08174 1060 aa12.24□□□□□ -0.45
HMGB3-204ENST00000448905 ZNF267Q14586 743 aaPredicted RBP12.24□□□□□ -0.45
HMGB3-204ENST00000448905 FASTKD3Q14CZ7 662 aaKnown RBP12.24□□□□□ -0.45
HMGB3-204ENST00000448905 OR4D1Q15615 310 aa12.24□□□□□ -0.45
HMGB3-204ENST00000448905 PRAMEF9Q5VWM5 478 aa12.24□□□□□ -0.45
HMGB3-204ENST00000448905 HLA-DQA1Q5Y7H0 255 aa12.24□□□□□ -0.45
HMGB3-204ENST00000448905 ADNP2Q6IQ32 1131 aa12.24□□□□□ -0.45
HMGB3-204ENST00000448905 RNF111Q6ZNA4 994 aa12.24□□□□□ -0.45
HMGB3-204ENST00000448905 CAMKMTQ7Z624 323 aa12.24□□□□□ -0.45
HMGB3-204ENST00000448905 TBC1D1Q86TI0 1168 aaPredicted RBP12.24□□□□□ -0.45
HMGB3-204ENST00000448905 PACS2Q86VP3 889 aa12.24□□□□□ -0.45
HMGB3-204ENST00000448905 KIF18BQ86Y91 864 aa12.24□□□□□ -0.45
HMGB3-204ENST00000448905 MYLK4Q86YV6 388 aaPredicted RBP12.24□□□□□ -0.45
HMGB3-204ENST00000448905 CREG2Q8IUH2 290 aa12.24□□□□□ -0.45
HMGB3-204ENST00000448905 CTAGE3PQ8IX95 158 aa12.24□□□□□ -0.45
HMGB3-204ENST00000448905 ULK2Q8IYT8 1036 aa12.24□□□□□ -0.45
HMGB3-204ENST00000448905 LRRC25Q8N386 305 aaPredicted RBP12.24□□□□□ -0.45
HMGB3-204ENST00000448905 REPS1Q96D71 796 aa12.24□□□□□ -0.45
HMGB3-204ENST00000448905 GPR22Q99680 433 aa12.24□□□□□ -0.45
HMGB3-204ENST00000448905 CXXC4Q9H2H0 198 aa12.24□□□□□ -0.45
HMGB3-204ENST00000448905 OR51B5Q9H339 312 aa12.24□□□□□ -0.45
HMGB3-204ENST00000448905 C15orf38-AP3S2A0A0A6YYH1 394 aa12.23□□□□□ -0.45
HMGB3-204ENST00000448905 C2orf92A0A1B0GVN3 265 aa12.23□□□□□ -0.45
HMGB3-204ENST00000448905 SYCE1LA8MT33 242 aa12.23□□□□□ -0.45
HMGB3-204ENST00000448905 SUPT3HB4E1H0 165 aa12.23□□□□□ -0.45
HMGB3-204ENST00000448905 PROM1O43490 865 aa12.23□□□□□ -0.45
HMGB3-204ENST00000448905 SUPT3HO75486 399 aa12.23□□□□□ -0.45
HMGB3-204ENST00000448905 TRAPPC6AO75865 159 aa12.23□□□□□ -0.45
HMGB3-204ENST00000448905 GSTA2P09210 222 aa12.23□□□□□ -0.45
HMGB3-204ENST00000448905 FBXO45P0C2W1 286 aa12.23□□□□□ -0.45
HMGB3-204ENST00000448905 RFPL3SP0C7P2 107 aa12.23□□□□□ -0.45
HMGB3-204ENST00000448905 KLK2P20151 261 aa12.23□□□□□ -0.45
HMGB3-204ENST00000448905 BMP5P22003 454 aa12.23□□□□□ -0.45
HMGB3-204ENST00000448905 GDF1P27539 372 aa12.23□□□□□ -0.45
HMGB3-204ENST00000448905 SSTR1P30872 391 aa12.23□□□□□ -0.45
HMGB3-204ENST00000448905 GALNSP34059 522 aa12.23□□□□□ -0.45
HMGB3-204ENST00000448905 TIMP3P35625 211 aa12.23□□□□□ -0.45
HMGB3-204ENST00000448905 NRG3P56975 720 aa12.23□□□□□ -0.45
HMGB3-204ENST00000448905 GNG11P61952 73 aa12.23□□□□□ -0.45
HMGB3-204ENST00000448905 DDX39BQ13838 428 aaKnown RBP12.23□□□□□ -0.45
HMGB3-204ENST00000448905 E2F2Q14209 437 aa12.23□□□□□ -0.45
HMGB3-204ENST00000448905 PRAMEF20Q5VT98 475 aa12.23□□□□□ -0.45
HMGB3-204ENST00000448905 LIPJQ5W064 366 aa12.23□□□□□ -0.45
HMGB3-204ENST00000448905 CYP20A1Q6UW02 462 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms