RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 STX4Q12846 297 aa18.35■□□□□ 0.53
SGCE-207ENST00000447873 ZNF750Q32MQ0 723 aa18.35■□□□□ 0.53
SGCE-207ENST00000447873 MINDY4Q4G0A6 757 aa18.35■□□□□ 0.53
SGCE-207ENST00000447873 HACD2Q6Y1H2 254 aa18.35■□□□□ 0.53
SGCE-207ENST00000447873 MED25Q71SY5 747 aa18.35■□□□□ 0.53
SGCE-207ENST00000447873 OVCH1Q7RTY7 1134 aa18.35■□□□□ 0.53
SGCE-207ENST00000447873 CCDC116Q8IYX3 515 aa18.35■□□□□ 0.53
SGCE-207ENST00000447873 OR4A15Q8NGL6 344 aa18.35■□□□□ 0.53
SGCE-207ENST00000447873 DNAJB8Q8NHS0 232 aa18.35■□□□□ 0.53
SGCE-207ENST00000447873 ZFP28Q8NHY6 868 aa18.35■□□□□ 0.53
SGCE-207ENST00000447873 ANKRD9Q96BM1 317 aaPredicted RBP18.35■□□□□ 0.53
SGCE-207ENST00000447873 SLC7A6OSQ96CW6 309 aaPredicted RBP18.35■□□□□ 0.53
SGCE-207ENST00000447873 ZNF681Q96N22 645 aa18.35■□□□□ 0.53
SGCE-207ENST00000447873 TGIF2Q9GZN2 237 aa18.35■□□□□ 0.53
SGCE-207ENST00000447873 C1orf21Q9H246 121 aa18.35■□□□□ 0.53
SGCE-207ENST00000447873 POLR1BQ9H9Y6 1135 aa18.35■□□□□ 0.53
SGCE-207ENST00000447873 LANCL2Q9NS86 450 aa18.35■□□□□ 0.53
SGCE-207ENST00000447873 TAS2R9Q9NYW1 312 aa18.35■□□□□ 0.53
SGCE-207ENST00000447873 TAS2R1Q9NYW7 299 aa18.35■□□□□ 0.53
SGCE-207ENST00000447873 IGLV3-12A0A075B6K2 115 aa18.34■□□□□ 0.53
SGCE-207ENST00000447873 TEX51A0A1B0GUA7 166 aa18.34■□□□□ 0.53
SGCE-207ENST00000447873 A0A1W2PS29 197 aa18.34■□□□□ 0.53
SGCE-207ENST00000447873 OR2W5A6NFC9 320 aa18.34■□□□□ 0.53
SGCE-207ENST00000447873 GYG2O15488 501 aa18.34■□□□□ 0.53
SGCE-207ENST00000447873 ERN1O75460 977 aaKnown RBP18.34■□□□□ 0.53
SGCE-207ENST00000447873 GSNP06396 782 aa18.34■□□□□ 0.53
SGCE-207ENST00000447873 CCNYL3P0C7X3 344 aa18.34■□□□□ 0.53
SGCE-207ENST00000447873 CPMP14384 443 aa18.34■□□□□ 0.53
SGCE-207ENST00000447873 PORP16435 677 aaPredicted RBP18.34■□□□□ 0.53
SGCE-207ENST00000447873 PTPN4P29074 926 aa18.34■□□□□ 0.53
SGCE-207ENST00000447873 NCALDP61601 193 aa18.34■□□□□ 0.53
SGCE-207ENST00000447873 HBA1P69905 142 aa18.34■□□□□ 0.53
SGCE-207ENST00000447873 GABREP78334 506 aa18.34■□□□□ 0.53
SGCE-207ENST00000447873 HSPB3Q12988 150 aa18.34■□□□□ 0.53
SGCE-207ENST00000447873 MLC1Q15049 377 aa18.34■□□□□ 0.53
SGCE-207ENST00000447873 CEBPEQ15744 281 aa18.34■□□□□ 0.53
SGCE-207ENST00000447873 MLIPQ5VWP3 458 aa18.34■□□□□ 0.53
SGCE-207ENST00000447873 C16orf89Q6UX73 402 aa18.34■□□□□ 0.53
SGCE-207ENST00000447873 DLEU7Q6UYE1 221 aa18.34■□□□□ 0.53
SGCE-207ENST00000447873 ZNF551Q7Z340 670 aaPredicted RBP18.34■□□□□ 0.53
SGCE-207ENST00000447873 PRSS58Q8IYP2 241 aa18.34■□□□□ 0.53
SGCE-207ENST00000447873 LRRC25Q8N386 305 aaPredicted RBP18.34■□□□□ 0.53
SGCE-207ENST00000447873 STT3BQ8TCJ2 826 aa18.34■□□□□ 0.53
SGCE-207ENST00000447873 OR5P2Q8WZ92 322 aa18.34■□□□□ 0.53
SGCE-207ENST00000447873 LRRC58Q96CX6 371 aa18.34■□□□□ 0.53
SGCE-207ENST00000447873 AMDHD1Q96NU7 426 aa18.34■□□□□ 0.53
SGCE-207ENST00000447873 BTBD10Q9BSF8 475 aa18.34■□□□□ 0.53
SGCE-207ENST00000447873 GLIPR2Q9H4G4 154 aa18.34■□□□□ 0.53
SGCE-207ENST00000447873 AKIRIN1Q9H9L7 192 aaPredicted RBP18.34■□□□□ 0.53
SGCE-207ENST00000447873 FOXJ2Q9P0K8 574 aa18.34■□□□□ 0.53
SGCE-207ENST00000447873 GPN3Q9UHW5 284 aaPredicted RBP18.34■□□□□ 0.53
SGCE-207ENST00000447873 MMACHCQ9Y4U1 282 aa18.34■□□□□ 0.53
SGCE-207ENST00000447873 A0A096LPI6 279 aa18.34■□□□□ 0.53
SGCE-207ENST00000447873 NVLO15381 856 aaKnown RBP18.34■□□□□ 0.53
SGCE-207ENST00000447873 ALBP02768 609 aa18.34■□□□□ 0.53
SGCE-207ENST00000447873 ZGLP1P0C6A0 271 aa18.34■□□□□ 0.53
SGCE-207ENST00000447873 MAOAP21397 527 aa18.34■□□□□ 0.53
SGCE-207ENST00000447873 GPC1P35052 558 aa18.34■□□□□ 0.53
SGCE-207ENST00000447873 CPOXP36551 454 aa18.34■□□□□ 0.53
SGCE-207ENST00000447873 CDKN2CP42773 168 aa18.34■□□□□ 0.53
SGCE-207ENST00000447873 LCN10Q6JVE6 187 aa18.34■□□□□ 0.53
SGCE-207ENST00000447873 C6orf15Q6UXA7 325 aaPredicted RBP18.34■□□□□ 0.53
SGCE-207ENST00000447873 ZNF621Q6ZSS3 439 aa18.34■□□□□ 0.53
SGCE-207ENST00000447873 FKBP10Q96AY3 582 aa18.34■□□□□ 0.53
SGCE-207ENST00000447873 PTCHD1Q96NR3 888 aa18.34■□□□□ 0.53
SGCE-207ENST00000447873 B3GNT4Q9C0J1 378 aa18.34■□□□□ 0.53
SGCE-207ENST00000447873 PAIP1Q9H074 479 aaKnown RBP18.34■□□□□ 0.53
SGCE-207ENST00000447873 CHST8Q9H2A9 424 aa18.34■□□□□ 0.53
SGCE-207ENST00000447873 C14orf105Q9NVL8 296 aa18.34■□□□□ 0.53
SGCE-207ENST00000447873 CROTQ9UKG9 612 aa18.34■□□□□ 0.53
SGCE-207ENST00000447873 CCDC88CQ9P219 2028 aa18.33■□□□□ 0.53
SGCE-207ENST00000447873 C9J4A7 227 aa18.33■□□□□ 0.52
SGCE-207ENST00000447873 RBMS1P29558 406 aaKnown RBP18.33■□□□□ 0.52
SGCE-207ENST00000447873 DUSP2Q05923 314 aa18.33■□□□□ 0.52
SGCE-207ENST00000447873 CAPRIN1Q14444 709 aaKnown RBP18.33■□□□□ 0.52
SGCE-207ENST00000447873 NKG7Q16617 165 aa18.33■□□□□ 0.52
SGCE-207ENST00000447873 LRIF1Q5T3J3 769 aa18.33■□□□□ 0.52
SGCE-207ENST00000447873 FAM199XQ6PEV8 388 aaPredicted RBP18.33■□□□□ 0.52
SGCE-207ENST00000447873 ZNF517Q6ZMY9 492 aaPredicted RBP18.33■□□□□ 0.52
SGCE-207ENST00000447873 QSOX2Q6ZRP7 698 aa18.33■□□□□ 0.52
SGCE-207ENST00000447873 SCUBE1Q8IWY4 988 aa18.33■□□□□ 0.52
SGCE-207ENST00000447873 TRIML2Q8N7C3 387 aa18.33■□□□□ 0.52
SGCE-207ENST00000447873 GOT1L1Q8NHS2 421 aaPredicted RBP18.33■□□□□ 0.52
SGCE-207ENST00000447873 SUN3Q8TAQ9 357 aa18.33■□□□□ 0.52
SGCE-207ENST00000447873 HOPXQ9BPY8 73 aaPredicted RBP18.33■□□□□ 0.52
SGCE-207ENST00000447873 SLC39A3Q9BRY0 314 aa18.33■□□□□ 0.52
SGCE-207ENST00000447873 ALOXE3Q9BYJ1 711 aa18.33■□□□□ 0.52
SGCE-207ENST00000447873 SLC26A1Q9H2B4 701 aa18.33■□□□□ 0.52
SGCE-207ENST00000447873 NEUROD4Q9HD90 331 aa18.33■□□□□ 0.52
SGCE-207ENST00000447873 PADI1Q9ULC6 663 aa18.33■□□□□ 0.52
SGCE-207ENST00000447873 MKL2Q9ULH7 1088 aa18.33■□□□□ 0.52
SGCE-207ENST00000447873 VPS4AQ9UN37 437 aa18.33■□□□□ 0.52
SGCE-207ENST00000447873 ERVK-11Q9UQG0 969 aa18.33■□□□□ 0.52
SGCE-207ENST00000447873 PCDHB14Q9Y5E9 798 aa18.33■□□□□ 0.52
SGCE-207ENST00000447873 WDFY3Q8IZQ1 3526 aa18.33■□□□□ 0.52
SGCE-207ENST00000447873 SDK2Q58EX2 2172 aa18.32■□□□□ 0.52
SGCE-207ENST00000447873 MYOCOSA0A1B0GUC4 107 aa18.32■□□□□ 0.52
SGCE-207ENST00000447873 FXYD1O00168 92 aa18.32■□□□□ 0.52
SGCE-207ENST00000447873 DLGAP3O95886 979 aa18.32■□□□□ 0.52
SGCE-207ENST00000447873 SLC35E2P0CK97 266 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms