RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 ANXA5P08758 320 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 TYMPP19971 482 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 HMGCLP35914 325 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 EXOSC2Q13868 293 aaKnown RBP4.8□□□□□ -1.64
HERC1-201ENST00000443617 ZNF79Q15937 498 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 KIAA1161Q6NSJ0 714 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 NANOGP1Q8N7R0 232 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 ARL6Q9H0F7 186 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 KLHL1Q9NR64 748 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 CYB5R1Q9UHQ9 305 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 ZNF225Q9UK10 706 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 CSNK1G3Q9Y6M4 447 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.8□□□□□ -1.64
HERC1-201ENST00000443617 A0A1W2PQH9 124 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 LRRN3E7EW58 273 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 PRAMEF11O60813 436 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 ZNF177Q13360 481 aaPredicted RBP4.8□□□□□ -1.64
HERC1-201ENST00000443617 NDUFA9Q16795 377 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 LAIR1Q6GTX8 287 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 LURAP1LQ8IV03 231 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 COPS5Q92905 334 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 LRRN3Q9H3W5 708 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 ELAC1Q9H777 363 aaKnown RBP4.8□□□□□ -1.64
HERC1-201ENST00000443617 NDRG3Q9UGV2 375 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 PADI2Q9Y2J8 665 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 ENPP4Q9Y6X5 453 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 YKT6O15498 198 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 ETV5P41161 510 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 GPAT4Q86UL3 456 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 PIANPQ8IYJ0 282 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 KRT78Q8N1N4 520 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 UPRTQ96BW1 309 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 NMNAT1Q9HAN9 279 aaPredicted RBP4.79□□□□□ -1.64
HERC1-201ENST00000443617 PCDHB7Q9Y5E2 793 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 AUP1Q9Y679 476 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 GABRA5P31644 462 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 ILKQ13418 452 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 GANABQ14697 944 aaKnown RBP4.79□□□□□ -1.64
HERC1-201ENST00000443617 LRRC70Q7Z2Q7 622 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 CIR1Q86X95 450 aaPredicted RBP4.79□□□□□ -1.64
HERC1-201ENST00000443617 PPTC7Q8NI37 304 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 PGAP3Q96FM1 320 aaPredicted RBP4.79□□□□□ -1.64
HERC1-201ENST00000443617 PCED1BQ96HM7 432 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 LINC00052Q96N35 136 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 CIPCQ9C0C6 399 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 PCDHGA2Q9Y5H1 932 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 WNK3Q9BYP7 1800 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 IQCF5A8MTL0 148 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 SGTAO43765 313 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 S100A6P06703 90 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 ALPIP09923 528 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 MC2RQ01718 297 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 PLA1AQ53H76 456 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 PAQR6Q6TCH4 344 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 MON1AQ86VX9 555 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 PCDHB1Q9Y5F3 818 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 H3BRB1 525 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 PRKYO43930 277 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 REM1O75628 298 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 SOX30O94993 753 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 GADD45GO95257 159 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 ALDOBP05062 364 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 CDKN2CP42773 168 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 KIAA1024LP59773 190 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 SZRD1Q7Z422 152 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 BEST4Q8NFU0 473 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 RAET1EQ8TD07 263 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 ABCC13Q9NSE7 274 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 ACER3Q9NUN7 267 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 ACTR10Q9NZ32 417 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 ADAMTS7Q9UKP4 1686 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 CD8B2A6NJW9 211 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 SDC3O75056 442 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 ADAP00813 363 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 CD8BP10966 210 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 CAPZA2P47755 286 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 HACD4Q5VWC8 232 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 TMIGD1Q6UXZ0 262 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 TMEM145Q8NBT3 493 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 HASPINQ8TF76 798 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 ZNF607Q96SK3 696 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 ATF6BQ99941 703 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 B3GAT3O94766 335 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 KCNE1P15382 129 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 ZFP36L2P47974 494 aaKnown RBP4.79□□□□□ -1.64
HERC1-201ENST00000443617 TWF1Q12792 350 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 RAET1GQ6H3X3 334 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 RASGRP3Q8IV61 690 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 DBF4BQ8NFT6 615 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 TADA1Q96BN2 335 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 IMP3Q9NV31 184 aaKnown RBP4.79□□□□□ -1.64
HERC1-201ENST00000443617 NOD1Q9Y239 953 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 M0QZ92 97 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 ARIH2O95376 493 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 OSMP13725 252 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 RBMS1P29558 406 aaKnown RBP4.79□□□□□ -1.64
HERC1-201ENST00000443617 MAPKAPK2P49137 400 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 TCTE1Q5JU00 501 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 SUSD1Q6UWL2 747 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 BAIAP2L2Q6UXY1 529 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms