RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 SMPD2O60906 423 aa13.57□□□□□ -0.24
HDAC8-213ENST00000436675 C1QAP02745 245 aa13.57□□□□□ -0.24
HDAC8-213ENST00000436675 CPN2P22792 545 aa13.57□□□□□ -0.24
HDAC8-213ENST00000436675 PPP2R2BQ00005 443 aa13.57□□□□□ -0.24
HDAC8-213ENST00000436675 SORDQ00796 357 aa13.57□□□□□ -0.24
HDAC8-213ENST00000436675 TSNQ15631 228 aaKnown RBP13.57□□□□□ -0.24
HDAC8-213ENST00000436675 MSS51Q4VC12 460 aa13.57□□□□□ -0.24
HDAC8-213ENST00000436675 SPANXN3Q5MJ09 141 aa13.57□□□□□ -0.24
HDAC8-213ENST00000436675 HP1BP3Q5SSJ5 553 aaPredicted RBP13.57□□□□□ -0.24
HDAC8-213ENST00000436675 DCST1Q5T197 706 aa13.57□□□□□ -0.24
HDAC8-213ENST00000436675 TEDDM1Q5T9Z0 273 aa13.57□□□□□ -0.24
HDAC8-213ENST00000436675 FRA10AC1Q70Z53 315 aa13.57□□□□□ -0.24
HDAC8-213ENST00000436675 UBE3DQ7Z6J8 389 aa13.57□□□□□ -0.24
HDAC8-213ENST00000436675 LUZP2Q86TE4 346 aa13.57□□□□□ -0.24
HDAC8-213ENST00000436675 IGDCC3Q8IVU1 814 aa13.57□□□□□ -0.24
HDAC8-213ENST00000436675 CNTN4Q8IWV2 1026 aa13.57□□□□□ -0.24
HDAC8-213ENST00000436675 DIO2Q92813 273 aa13.57□□□□□ -0.24
HDAC8-213ENST00000436675 CERS2Q96G23 380 aa13.57□□□□□ -0.24
HDAC8-213ENST00000436675 PDLIM5Q96HC4 596 aaKnown RBP13.57□□□□□ -0.24
HDAC8-213ENST00000436675 ZNF597Q96LX8 424 aa13.57□□□□□ -0.24
HDAC8-213ENST00000436675 LZTFL1Q9NQ48 299 aa13.57□□□□□ -0.24
HDAC8-213ENST00000436675 ADAM21Q9UKJ8 722 aa13.57□□□□□ -0.24
HDAC8-213ENST00000436675 ZNF490Q9ULM2 529 aaPredicted RBP13.57□□□□□ -0.24
HDAC8-213ENST00000436675 OARD1Q9Y530 152 aa13.57□□□□□ -0.24
HDAC8-213ENST00000436675 DSCAMO60469 2012 aa13.57□□□□□ -0.24
HDAC8-213ENST00000436675 NBEAL1Q6ZS30 2694 aa13.57□□□□□ -0.24
HDAC8-213ENST00000436675 SH3D21A4FU49 640 aa13.56□□□□□ -0.24
HDAC8-213ENST00000436675 CASKO14936 926 aa13.56□□□□□ -0.24
HDAC8-213ENST00000436675 PRAMEF4O60810 478 aa13.56□□□□□ -0.24
HDAC8-213ENST00000436675 TRIM3O75382 744 aaPredicted RBP13.56□□□□□ -0.24
HDAC8-213ENST00000436675 IGKV3-11P04433 115 aa13.56□□□□□ -0.24
HDAC8-213ENST00000436675 FBXO45P0C2W1 286 aa13.56□□□□□ -0.24
HDAC8-213ENST00000436675 ZNF37AP17032 561 aaPredicted RBP13.56□□□□□ -0.24
HDAC8-213ENST00000436675 ATP5A1P25705 553 aaKnown RBP13.56□□□□□ -0.24
HDAC8-213ENST00000436675 SERPINB3P29508 390 aa13.56□□□□□ -0.24
HDAC8-213ENST00000436675 OPRM1P35372 400 aa13.56□□□□□ -0.24
HDAC8-213ENST00000436675 STT3AP46977 705 aa13.56□□□□□ -0.24
HDAC8-213ENST00000436675 CPA2P48052 419 aa13.56□□□□□ -0.24
HDAC8-213ENST00000436675 SLC6A12P48065 614 aa13.56□□□□□ -0.24
HDAC8-213ENST00000436675 TGM3Q08188 693 aa13.56□□□□□ -0.24
HDAC8-213ENST00000436675 TBL3Q12788 808 aaKnown RBP13.56□□□□□ -0.24
HDAC8-213ENST00000436675 FOXF2Q12947 444 aa13.56□□□□□ -0.24
HDAC8-213ENST00000436675 EIPR1Q53HC9 387 aa13.56□□□□□ -0.24
HDAC8-213ENST00000436675 PRAMEF9Q5VWM5 478 aa13.56□□□□□ -0.24
HDAC8-213ENST00000436675 PLXDC2Q6UX71 529 aa13.56□□□□□ -0.24
HDAC8-213ENST00000436675 PPIL6Q8IXY8 311 aa13.56□□□□□ -0.24
HDAC8-213ENST00000436675 PM20D2Q8IYS1 436 aa13.56□□□□□ -0.24
HDAC8-213ENST00000436675 SLC15A4Q8N697 577 aa13.56□□□□□ -0.24
HDAC8-213ENST00000436675 ACOT4Q8N9L9 421 aa13.56□□□□□ -0.24
HDAC8-213ENST00000436675 SNX31Q8N9S9 440 aa13.56□□□□□ -0.24
HDAC8-213ENST00000436675 C9orf106Q8NAJ2 232 aa13.56□□□□□ -0.24
HDAC8-213ENST00000436675 SPATA3Q8NHX4 192 aa13.56□□□□□ -0.24
HDAC8-213ENST00000436675 ESAMQ96AP7 390 aa13.56□□□□□ -0.24
HDAC8-213ENST00000436675 RHBDF1Q96CC6 855 aa13.56□□□□□ -0.24
HDAC8-213ENST00000436675 CFAP36Q96G28 342 aa13.56□□□□□ -0.24
HDAC8-213ENST00000436675 MS4A14Q96JA4 679 aa13.56□□□□□ -0.24
HDAC8-213ENST00000436675 UGT2B28Q9BY64 529 aa13.56□□□□□ -0.24
HDAC8-213ENST00000436675 PRDM14Q9GZV8 571 aa13.56□□□□□ -0.24
HDAC8-213ENST00000436675 NT5DC2Q9H857 520 aa13.56□□□□□ -0.24
HDAC8-213ENST00000436675 LYRM4Q9HD34 91 aa13.56□□□□□ -0.24
HDAC8-213ENST00000436675 GALNT8Q9NY28 637 aa13.56□□□□□ -0.24
HDAC8-213ENST00000436675 CTNNAL1Q9UBT7 734 aa13.56□□□□□ -0.24
HDAC8-213ENST00000436675 EIF3LQ9Y262 564 aaKnown RBP13.56□□□□□ -0.24
HDAC8-213ENST00000436675 SPACA6W5XKT8 324 aa13.56□□□□□ -0.24
HDAC8-213ENST00000436675 ROS1P08922 2347 aa13.56□□□□□ -0.24
HDAC8-213ENST00000436675 SAP18O00422 153 aaKnown RBP13.55□□□□□ -0.24
HDAC8-213ENST00000436675 DYRK3O43781 588 aa13.55□□□□□ -0.24
HDAC8-213ENST00000436675 ERN1O75460 977 aaKnown RBP13.55□□□□□ -0.24
HDAC8-213ENST00000436675 PRKRAO75569 313 aaKnown RBP13.55□□□□□ -0.24
HDAC8-213ENST00000436675 TTC4O95801 387 aa13.55□□□□□ -0.24
HDAC8-213ENST00000436675 TMIGD3P0DMS9 266 aaPredicted RBP13.55□□□□□ -0.24
HDAC8-213ENST00000436675 BMP7P18075 431 aa13.55□□□□□ -0.24
HDAC8-213ENST00000436675 GSTM2P28161 218 aa13.55□□□□□ -0.24
HDAC8-213ENST00000436675 HPDP32754 393 aaPredicted RBP13.55□□□□□ -0.24
HDAC8-213ENST00000436675 KCNC1P48547 511 aa13.55□□□□□ -0.24
HDAC8-213ENST00000436675 HNMTP50135 292 aa13.55□□□□□ -0.24
HDAC8-213ENST00000436675 CDK9P50750 372 aaKnown RBP13.55□□□□□ -0.24
HDAC8-213ENST00000436675 FBXW4P57775 412 aa13.55□□□□□ -0.24
HDAC8-213ENST00000436675 HERVK_113P63132 956 aa13.55□□□□□ -0.24
HDAC8-213ENST00000436675 ERVK-8P63133 956 aa13.55□□□□□ -0.24
HDAC8-213ENST00000436675 CDKL1Q00532 357 aa13.55□□□□□ -0.24
HDAC8-213ENST00000436675 DOC2AQ14183 400 aa13.55□□□□□ -0.24
HDAC8-213ENST00000436675 ZNF267Q14586 743 aaPredicted RBP13.55□□□□□ -0.24
HDAC8-213ENST00000436675 SF3B4Q15427 424 aaKnown RBP eCLIP13.55□□□□□ -0.24
HDAC8-213ENST00000436675 VASNQ6EMK4 673 aa13.55□□□□□ -0.24
HDAC8-213ENST00000436675 TRMT10BQ6PF06 316 aaKnown RBP13.55□□□□□ -0.24
HDAC8-213ENST00000436675 CCDC137Q6PK04 289 aaKnown RBP13.55□□□□□ -0.24
HDAC8-213ENST00000436675 SYDE1Q6ZW31 735 aaPredicted RBP13.55□□□□□ -0.24
HDAC8-213ENST00000436675 SLC29A4Q7RTT9 530 aa13.55□□□□□ -0.24
HDAC8-213ENST00000436675 YTHDF3Q7Z739 585 aaKnown RBP13.55□□□□□ -0.24
HDAC8-213ENST00000436675 ANKRD49Q8WVL7 239 aa13.55□□□□□ -0.24
HDAC8-213ENST00000436675 PERPQ96FX8 193 aa13.55□□□□□ -0.24
HDAC8-213ENST00000436675 RBM18Q96H35 190 aaKnown RBP13.55□□□□□ -0.24
HDAC8-213ENST00000436675 WDYHV1Q96HA8 205 aa13.55□□□□□ -0.24
HDAC8-213ENST00000436675 DACH2Q96NX9 599 aa13.55□□□□□ -0.24
HDAC8-213ENST00000436675 GNRHR2Q96P88 292 aa13.55□□□□□ -0.24
HDAC8-213ENST00000436675 KCNC2Q96PR1 638 aa13.55□□□□□ -0.24
HDAC8-213ENST00000436675 SORBS1Q9BX66 1292 aaKnown RBP13.55□□□□□ -0.24
HDAC8-213ENST00000436675 ERVK-6Q9BXR3 956 aa13.55□□□□□ -0.24
HDAC8-213ENST00000436675 WWTR1Q9GZV5 400 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms