RNA–Protein interactions for RNA: ENST00000435747.2

CPNE1-214, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-214ENST00000435747 A0A1B0GVC2 190 aa9.59□□□□□ -0.87
CPNE1-214ENST00000435747 SH3D21A4FU49 640 aa9.59□□□□□ -0.87
CPNE1-214ENST00000435747 PABPN1LA6NDY0 278 aaKnown RBP9.59□□□□□ -0.87
CPNE1-214ENST00000435747 NCF1BA6NI72 391 aaPredicted RBP9.59□□□□□ -0.87
CPNE1-214ENST00000435747 NCF1CA8MVU1 366 aaPredicted RBP9.59□□□□□ -0.87
CPNE1-214ENST00000435747 CLEC3AO75596 197 aa9.59□□□□□ -0.87
CPNE1-214ENST00000435747 IGHG3P01860 377 aa9.59□□□□□ -0.87
CPNE1-214ENST00000435747 TUBB4AP04350 444 aa9.59□□□□□ -0.87
CPNE1-214ENST00000435747 NCF1P14598 390 aaPredicted RBP9.59□□□□□ -0.87
CPNE1-214ENST00000435747 STMN1P16949 149 aa9.59□□□□□ -0.87
CPNE1-214ENST00000435747 MAOAP21397 527 aa9.59□□□□□ -0.87
CPNE1-214ENST00000435747 JAK1P23458 1154 aa9.59□□□□□ -0.87
CPNE1-214ENST00000435747 GSTM2P28161 218 aa9.59□□□□□ -0.87
CPNE1-214ENST00000435747 HNF4AP41235 474 aa9.59□□□□□ -0.87
CPNE1-214ENST00000435747 CASP2P42575 452 aa9.59□□□□□ -0.87
CPNE1-214ENST00000435747 MAGEA4P43358 317 aa9.59□□□□□ -0.87
CPNE1-214ENST00000435747 MAN2A2P49641 1150 aa9.59□□□□□ -0.87
CPNE1-214ENST00000435747 HNRNPFP52597 415 aaKnown RBP9.59□□□□□ -0.87
CPNE1-214ENST00000435747 RAB10P61026 200 aa9.59□□□□□ -0.87
CPNE1-214ENST00000435747 ATP6V0D1P61421 351 aa9.59□□□□□ -0.87
CPNE1-214ENST00000435747 SRSF2Q01130 221 aaKnown RBP9.59□□□□□ -0.87
CPNE1-214ENST00000435747 CAV1Q03135 178 aa9.59□□□□□ -0.87
CPNE1-214ENST00000435747 CAPRIN1Q14444 709 aaKnown RBP9.59□□□□□ -0.87
CPNE1-214ENST00000435747 SLBPQ14493 270 aaKnown RBP eCLIP9.59□□□□□ -0.87
CPNE1-214ENST00000435747 EFTUD2Q15029 972 aaKnown RBP eCLIP9.59□□□□□ -0.874e-27■■■■■ 66
CPNE1-214ENST00000435747 PDLIM3Q53GG5 364 aaPredicted RBP9.59□□□□□ -0.87
CPNE1-214ENST00000435747 FBXO48Q5FWF7 155 aa9.59□□□□□ -0.87
CPNE1-214ENST00000435747 TOR1AIP1Q5JTV8 583 aa9.59□□□□□ -0.87
CPNE1-214ENST00000435747 WIPI1Q5MNZ9 446 aaPredicted RBP9.59□□□□□ -0.87
CPNE1-214ENST00000435747 GRTP1Q5TC63 336 aa9.59□□□□□ -0.87
CPNE1-214ENST00000435747 SULT1C3Q6IMI6 304 aa9.59□□□□□ -0.87
CPNE1-214ENST00000435747 C20orf204Q6ZNR8 217 aa9.59□□□□□ -0.87
CPNE1-214ENST00000435747 UBE3DQ7Z6J8 389 aa9.59□□□□□ -0.87
CPNE1-214ENST00000435747 CMC1Q7Z7K0 106 aa9.59□□□□□ -0.87
CPNE1-214ENST00000435747 CENPLQ8N0S6 344 aaPredicted RBP9.59□□□□□ -0.87
CPNE1-214ENST00000435747 TCAIMQ8N3R3 496 aa9.59□□□□□ -0.87
CPNE1-214ENST00000435747 TBC1D19Q8N5T2 526 aa9.59□□□□□ -0.87
CPNE1-214ENST00000435747 NAXEQ8NCW5 288 aa9.59□□□□□ -0.87
CPNE1-214ENST00000435747 TMEM52Q8NDY8 209 aa9.59□□□□□ -0.87
CPNE1-214ENST00000435747 FBF1Q8TES7 1133 aa9.59□□□□□ -0.87
CPNE1-214ENST00000435747 ANP32BQ92688 251 aaKnown RBP9.59□□□□□ -0.87
CPNE1-214ENST00000435747 CDKL2Q92772 493 aa9.59□□□□□ -0.87
CPNE1-214ENST00000435747 GAL3ST3Q96A11 431 aa9.59□□□□□ -0.87
CPNE1-214ENST00000435747 TSPAN17Q96FV3 270 aa9.59□□□□□ -0.87
CPNE1-214ENST00000435747 EGFL8Q99944 293 aa9.59□□□□□ -0.87
CPNE1-214ENST00000435747 RHBGQ9H310 441 aa9.59□□□□□ -0.87
CPNE1-214ENST00000435747 EXO5Q9H790 373 aa9.59□□□□□ -0.87
CPNE1-214ENST00000435747 TIMMDC1Q9NPL8 285 aa9.59□□□□□ -0.87
CPNE1-214ENST00000435747 ZNF629Q9UEG4 869 aaPredicted RBP9.59□□□□□ -0.87
CPNE1-214ENST00000435747 ZNF223Q9UK11 482 aaPredicted RBP9.59□□□□□ -0.87
CPNE1-214ENST00000435747 DOCK7Q96N67 2140 aa9.59□□□□□ -0.87
CPNE1-214ENST00000435747 MED12Q93074 2177 aa9.58□□□□□ -0.88
CPNE1-214ENST00000435747 FREM3P0C091 2139 aa9.58□□□□□ -0.88
CPNE1-214ENST00000435747 TRRAPQ9Y4A5 3859 aa9.58□□□□□ -0.88
CPNE1-214ENST00000435747 ESYT3A0FGR9 886 aa9.58□□□□□ -0.88
CPNE1-214ENST00000435747 PINLYPA6NC86 204 aa9.58□□□□□ -0.88
CPNE1-214ENST00000435747 URADA6NGE7 173 aa9.58□□□□□ -0.88
CPNE1-214ENST00000435747 SAGE2PA6NJ88 616 aa9.58□□□□□ -0.88
CPNE1-214ENST00000435747 EEF1E1-BLOC1S5C9J1V9 151 aa9.58□□□□□ -0.88
CPNE1-214ENST00000435747 CYR61O00622 381 aa9.58□□□□□ -0.88
CPNE1-214ENST00000435747 EEF1E1O43324 174 aaKnown RBP9.58□□□□□ -0.88
CPNE1-214ENST00000435747 B4GALT2O60909 372 aa9.58□□□□□ -0.88
CPNE1-214ENST00000435747 STK16O75716 305 aa9.58□□□□□ -0.88
CPNE1-214ENST00000435747 SOX30O94993 753 aa9.58□□□□□ -0.88
CPNE1-214ENST00000435747 SERPIND1P05546 499 aa9.58□□□□□ -0.88
CPNE1-214ENST00000435747 RNH1P13489 461 aaKnown RBP9.58□□□□□ -0.88
CPNE1-214ENST00000435747 CASQ1P31415 396 aa9.58□□□□□ -0.88
CPNE1-214ENST00000435747 SPRP35270 261 aaPredicted RBP9.58□□□□□ -0.88
CPNE1-214ENST00000435747 HSPA7P48741 367 aa9.58□□□□□ -0.88
CPNE1-214ENST00000435747 OR4D2P58180 307 aa9.58□□□□□ -0.88
CPNE1-214ENST00000435747 SKP1P63208 163 aa9.58□□□□□ -0.88
CPNE1-214ENST00000435747 VEZF1Q14119 521 aa9.58□□□□□ -0.88
CPNE1-214ENST00000435747 DOC2AQ14183 400 aa9.58□□□□□ -0.88
CPNE1-214ENST00000435747 RBBP5Q15291 538 aaKnown RBP9.58□□□□□ -0.88
CPNE1-214ENST00000435747 TERF2Q15554 542 aa9.58□□□□□ -0.88
CPNE1-214ENST00000435747 TBCCQ15814 346 aa9.58□□□□□ -0.88
CPNE1-214ENST00000435747 HYAL4Q2M3T9 481 aa9.58□□□□□ -0.88
CPNE1-214ENST00000435747 ABHD17CQ6PCB6 329 aa9.58□□□□□ -0.88
CPNE1-214ENST00000435747 SEM1Q6ZVN7 128 aa9.58□□□□□ -0.88
CPNE1-214ENST00000435747 FRA10AC1Q70Z53 315 aa9.58□□□□□ -0.88
CPNE1-214ENST00000435747 MDGA2Q7Z553 956 aa9.58□□□□□ -0.88
CPNE1-214ENST00000435747 GPSM1Q86YR5 675 aa9.58□□□□□ -0.88
CPNE1-214ENST00000435747 RELL1Q8IUW5 271 aa9.58□□□□□ -0.88
CPNE1-214ENST00000435747 FAM109AQ8N4B1 249 aa9.58□□□□□ -0.88
CPNE1-214ENST00000435747 TMEM156Q8N614 296 aa9.58□□□□□ -0.88
CPNE1-214ENST00000435747 TTLQ8NG68 377 aa9.58□□□□□ -0.88
CPNE1-214ENST00000435747 OR2L5Q8NG80 312 aa9.58□□□□□ -0.88
CPNE1-214ENST00000435747 UBTD2Q8WUN7 234 aa9.58□□□□□ -0.88
CPNE1-214ENST00000435747 ISL2Q96A47 359 aa9.58□□□□□ -0.88
CPNE1-214ENST00000435747 PTCD3Q96EY7 689 aaKnown RBP9.58□□□□□ -0.88
CPNE1-214ENST00000435747 PTCHD1Q96NR3 888 aa9.58□□□□□ -0.88
CPNE1-214ENST00000435747 NPLQ9BXD5 320 aaPredicted RBP9.58□□□□□ -0.88
CPNE1-214ENST00000435747 CAPS2Q9BXY5 557 aa9.58□□□□□ -0.88
CPNE1-214ENST00000435747 FUT8Q9BYC5 575 aa9.58□□□□□ -0.88
CPNE1-214ENST00000435747 TTTY12Q9BZ98 90 aa9.58□□□□□ -0.88
CPNE1-214ENST00000435747 RAB17Q9H0T7 212 aa9.58□□□□□ -0.88
CPNE1-214ENST00000435747 LDAHQ9H6V9 325 aa9.58□□□□□ -0.88
CPNE1-214ENST00000435747 PRDM9Q9NQV7 894 aa9.58□□□□□ -0.88
CPNE1-214ENST00000435747 PRDM7Q9NQW5 492 aa9.58□□□□□ -0.88
CPNE1-214ENST00000435747 DNAJC11Q9NVH1 559 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms