RNA–Protein interactions for RNA: ENST00000434046.6

SYNPO2-203, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-203ENST00000434046 VN1R5Q7Z5H4 357 aa7.08□□□□□ -1.28
SYNPO2-203ENST00000434046 CMTM8Q8IZV2 173 aa7.08□□□□□ -1.28
SYNPO2-203ENST00000434046 NAGSQ8N159 534 aa7.08□□□□□ -1.28
SYNPO2-203ENST00000434046 IQCF1Q8N6M8 205 aa7.08□□□□□ -1.28
SYNPO2-203ENST00000434046 OR4K1Q8NGD4 311 aa7.08□□□□□ -1.28
SYNPO2-203ENST00000434046 COQ8AQ8NI60 647 aa7.08□□□□□ -1.28
SYNPO2-203ENST00000434046 LINC01599Q8WXQ3 324 aa7.08□□□□□ -1.28
SYNPO2-203ENST00000434046 TTC9Q92623 222 aa7.08□□□□□ -1.28
SYNPO2-203ENST00000434046 MAPKAP1Q9BPZ7 522 aa7.08□□□□□ -1.28
SYNPO2-203ENST00000434046 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.08□□□□□ -1.28
SYNPO2-203ENST00000434046 POLR2J3Q9H1A7 115 aaKnown RBP7.08□□□□□ -1.28
SYNPO2-203ENST00000434046 RANBP3Q9H6Z4 567 aaPredicted RBP7.08□□□□□ -1.28
SYNPO2-203ENST00000434046 HHATLQ9HCP6 504 aa7.08□□□□□ -1.28
SYNPO2-203ENST00000434046 SLC35C2Q9NQQ7 365 aa7.08□□□□□ -1.28
SYNPO2-203ENST00000434046 ENAMQ9NRM1 1142 aa7.08□□□□□ -1.28
SYNPO2-203ENST00000434046 PLCXD1Q9NUJ7 323 aa7.08□□□□□ -1.28
SYNPO2-203ENST00000434046 MARCH5Q9NX47 278 aa7.08□□□□□ -1.28
SYNPO2-203ENST00000434046 MRPL39Q9NYK5 338 aaKnown RBP7.08□□□□□ -1.28
SYNPO2-203ENST00000434046 ZNF638Q14966 1978 aaKnown RBP7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 A0A0B4J293 547 aa7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 TRBC2A0A5B9 178 aa7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 SLC9A3R1O14745 358 aaPredicted RBP7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 GRM6O15303 877 aa7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 PLA2G10O15496 165 aa7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 EEF1E1O43324 174 aaKnown RBP7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 APOC3P02656 99 aa7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 SCG5P05408 212 aa7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 SPAM1P38567 509 aa7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 MAGEA2P43356 314 aa7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 XKP51811 444 aa7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 DEFA5Q01523 94 aa7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 SRSF11Q05519 484 aaKnown RBP7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 CHIT1Q13231 466 aa7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 ADAM15Q13444 863 aa7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 PCBP2Q15366 365 aaKnown RBP eCLIP7.07□□□□□ -1.284e-11■■■■■ 46.3
SYNPO2-203ENST00000434046 MICAQ29983 383 aa7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 KLHL22Q53GT1 634 aa7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 CTSL3PQ5NE16 218 aa7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 OR2G6Q5TZ20 316 aa7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 FAHD1Q6P587 224 aa7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 SLC39A5Q6ZMH5 540 aa7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 SERPINA11Q86U17 422 aa7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 CACUL1Q86Y37 369 aa7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 TMEM145Q8NBT3 493 aa7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 UFD1Q92890 307 aa7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 RNF31Q96EP0 1072 aa7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 C12orf66Q96MD2 445 aa7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 FOLH1BQ9HBA9 442 aa7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 TMEM184CQ9NVA4 438 aa7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 PFDN2Q9UHV9 154 aa7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 ACSL6Q9UKU0 697 aa7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 PPT2Q9UMR5 302 aa7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 CFAP20Q9Y6A4 193 aaKnown RBP7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 LOC285095A0A1B0GVY8 99 aa7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 FGF18O76093 207 aa7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 GBAP04062 536 aa7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 ANXA4P09525 319 aaPredicted RBP7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 EBLN1P0CF75 366 aa7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 ATF6P18850 670 aa7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 PER3P56645 1201 aa7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 TSPAN5P62079 268 aa7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 SCARB2Q14108 478 aa7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 AANATQ16613 207 aa7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 XKR6Q5GH73 641 aa7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 GCNT6Q5T4J0 391 aa7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 LYPLAL1Q5VWZ2 237 aa7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 TEX261Q6UWH6 196 aa7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 UBE2R2Q712K3 238 aaPredicted RBP7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 LHFPL3Q86UP9 236 aa7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 FTMTQ8N4E7 242 aa7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 DCAF4L2Q8NA75 395 aa7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 OR2T35Q8NGX2 323 aa7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 CSGALNACT1Q8TDX6 532 aa7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 ST8SIA4Q92187 359 aa7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 AP2M1Q96CW1 435 aa7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 ZBED6CLQ96FA7 236 aaPredicted RBP7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 METTL2AQ96IZ6 378 aaKnown RBP7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 COQ10AQ96MF6 247 aa7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 ERMAPQ96PL5 475 aaPredicted RBP7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 BOCQ9BWV1 1114 aa7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 DHRS7Q9Y394 339 aa7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 U3KQ87 197 aa7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 ARPC4-TTLL3A0A0A6YYG9 625 aa7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 DRGXA6NNA5 263 aa7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 LRRTM2O43300 516 aa7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 PROM1O43490 865 aa7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 PCDH7O60245 1069 aa7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 IGLV3-25P01717 112 aa7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 SYPP08247 313 aa7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 IGFBP1P08833 259 aaPredicted RBP7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 SRCP12931 536 aa7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 HLA-EP13747 358 aa7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 EPORP19235 508 aa7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 CELP19835 753 aa7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 C4BPBP20851 252 aa7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 CHMP24386 653 aa7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 SLC6A4P31645 630 aa7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 GKP32189 559 aa7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 SLC16A1P53985 500 aa7.07□□□□□ -1.28
SYNPO2-203ENST00000434046 EXOSC2Q13868 293 aaKnown RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms