RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 AKAP13Q12802 2813 aa14.38□□□□□ -0.11
CNOT9-205ENST00000433439 ZNF891A8MT65 544 aaPredicted RBP14.38□□□□□ -0.11
CNOT9-205ENST00000433439 TAF4O00268 1085 aa14.38□□□□□ -0.11
CNOT9-205ENST00000433439 PEX12O00623 359 aa14.38□□□□□ -0.11
CNOT9-205ENST00000433439 EFSO43281 561 aa14.38□□□□□ -0.11
CNOT9-205ENST00000433439 SNX3O60493 162 aa14.38□□□□□ -0.11
CNOT9-205ENST00000433439 SHOX2O60902 331 aaPredicted RBP14.38□□□□□ -0.11
CNOT9-205ENST00000433439 SEC24DO94855 1032 aaPredicted RBP14.38□□□□□ -0.11
CNOT9-205ENST00000433439 NT5EP21589 574 aa14.38□□□□□ -0.11
CNOT9-205ENST00000433439 RPL3P39023 403 aaKnown RBP14.38□□□□□ -0.11
CNOT9-205ENST00000433439 SERTAD2Q14140 314 aa14.38□□□□□ -0.11
CNOT9-205ENST00000433439 UGT8Q16880 541 aa14.38□□□□□ -0.11
CNOT9-205ENST00000433439 PDCD4Q53EL6 469 aaKnown RBP14.38□□□□□ -0.11
CNOT9-205ENST00000433439 CPTPQ5TA50 214 aa14.38□□□□□ -0.11
CNOT9-205ENST00000433439 CCDC81Q6ZN84 652 aa14.38□□□□□ -0.11
CNOT9-205ENST00000433439 MED25Q71SY5 747 aa14.38□□□□□ -0.11
CNOT9-205ENST00000433439 CPEB2Q7Z5Q1 589 aaKnown RBP14.38□□□□□ -0.11
CNOT9-205ENST00000433439 PPP1R32Q7Z5V6 425 aa14.38□□□□□ -0.11
CNOT9-205ENST00000433439 ZSCAN1Q8NBB4 408 aa14.38□□□□□ -0.11
CNOT9-205ENST00000433439 OR9I1Q8NGQ6 314 aa14.38□□□□□ -0.11
CNOT9-205ENST00000433439 CIDECQ96AQ7 238 aaPredicted RBP14.38□□□□□ -0.11
CNOT9-205ENST00000433439 CNRIP1Q96F85 164 aaPredicted RBP14.38□□□□□ -0.11
CNOT9-205ENST00000433439 RBM18Q96H35 190 aaKnown RBP14.38□□□□□ -0.11
CNOT9-205ENST00000433439 TEX37Q96LM6 180 aa14.38□□□□□ -0.11
CNOT9-205ENST00000433439 PRPF18Q99633 342 aaKnown RBP14.38□□□□□ -0.11
CNOT9-205ENST00000433439 FAM117AQ9C073 453 aa14.38□□□□□ -0.11
CNOT9-205ENST00000433439 EHD3Q9NZN3 535 aa14.38□□□□□ -0.11
CNOT9-205ENST00000433439 COPG1Q9Y678 874 aaKnown RBP14.38□□□□□ -0.11
CNOT9-205ENST00000433439 IGKV3D-11A0A0A0MRZ8 115 aa14.37□□□□□ -0.11
CNOT9-205ENST00000433439 TCRBV16S1A1N1A0A5B0 115 aa14.37□□□□□ -0.11
CNOT9-205ENST00000433439 TMEM8BA6NDV4 472 aa14.37□□□□□ -0.11
CNOT9-205ENST00000433439 MASP2O00187 686 aa14.37□□□□□ -0.11
CNOT9-205ENST00000433439 ANKRD28O15084 1053 aa14.37□□□□□ -0.11
CNOT9-205ENST00000433439 LAMP1P11279 417 aa14.37□□□□□ -0.11
CNOT9-205ENST00000433439 CPMP14384 443 aa14.37□□□□□ -0.11
CNOT9-205ENST00000433439 PORP16435 677 aaPredicted RBP14.37□□□□□ -0.11
CNOT9-205ENST00000433439 CSNK2A2P19784 350 aaPredicted RBP14.37□□□□□ -0.11
CNOT9-205ENST00000433439 NTSP30990 170 aa14.37□□□□□ -0.11
CNOT9-205ENST00000433439 CLNS1AP54105 237 aaKnown RBP14.37□□□□□ -0.11
CNOT9-205ENST00000433439 PLIN5Q00G26 463 aa14.37□□□□□ -0.11
CNOT9-205ENST00000433439 DUSP2Q05923 314 aa14.37□□□□□ -0.11
CNOT9-205ENST00000433439 ATP1A4Q13733 1029 aa14.37□□□□□ -0.11
CNOT9-205ENST00000433439 SQLEQ14534 574 aa14.37□□□□□ -0.11
CNOT9-205ENST00000433439 TMEM205Q6UW68 189 aa14.37□□□□□ -0.11
CNOT9-205ENST00000433439 KIRREL2Q6UWL6 708 aa14.37□□□□□ -0.11
CNOT9-205ENST00000433439 MRGPREQ86SM8 312 aa14.37□□□□□ -0.11
CNOT9-205ENST00000433439 CCDC116Q8IYX3 515 aa14.37□□□□□ -0.11
CNOT9-205ENST00000433439 AMER2Q8N7J2 671 aa14.37□□□□□ -0.11
CNOT9-205ENST00000433439 STON2Q8WXE9 905 aa14.37□□□□□ -0.11
CNOT9-205ENST00000433439 BRINP2Q9C0B6 783 aa14.37□□□□□ -0.11
CNOT9-205ENST00000433439 CPNE5Q9HCH3 593 aa14.37□□□□□ -0.11
CNOT9-205ENST00000433439 ATP6V1HQ9UI12 483 aa14.37□□□□□ -0.11
CNOT9-205ENST00000433439 CLDN16Q9Y5I7 305 aa14.37□□□□□ -0.11
CNOT9-205ENST00000433439 FAM208BQ5VWN6 2430 aa14.37□□□□□ -0.11
CNOT9-205ENST00000433439 SOCS6O14544 535 aa14.36□□□□□ -0.11
CNOT9-205ENST00000433439 PDPK1O15530 556 aa14.36□□□□□ -0.11
CNOT9-205ENST00000433439 SLC22A3O75751 556 aa14.36□□□□□ -0.11
CNOT9-205ENST00000433439 FAM107AO95990 144 aa14.36□□□□□ -0.11
CNOT9-205ENST00000433439 DDX5P17844 614 aaKnown RBP14.36□□□□□ -0.11
CNOT9-205ENST00000433439 IL12AP29459 219 aa14.36□□□□□ -0.11
CNOT9-205ENST00000433439 S100A3P33764 101 aa14.36□□□□□ -0.11
CNOT9-205ENST00000433439 PGDP52209 483 aa14.36□□□□□ -0.11
CNOT9-205ENST00000433439 NCBP2P52298 156 aaKnown RBP eCLIP14.36□□□□□ -0.113e-13■□□□□ 9.5
CNOT9-205ENST00000433439 DGKQP52824 942 aa14.36□□□□□ -0.11
CNOT9-205ENST00000433439 TLE3Q04726 772 aa14.36□□□□□ -0.11
CNOT9-205ENST00000433439 CDC20Q12834 499 aa14.36□□□□□ -0.11
CNOT9-205ENST00000433439 PDE7AQ13946 482 aa14.36□□□□□ -0.11
CNOT9-205ENST00000433439 FAM174BQ3ZCQ3 159 aa14.36□□□□□ -0.11
CNOT9-205ENST00000433439 AGKQ53H12 422 aa14.36□□□□□ -0.11
CNOT9-205ENST00000433439 SPANXN4Q5MJ08 99 aa14.36□□□□□ -0.11
CNOT9-205ENST00000433439 C6orf163Q5TEZ5 329 aa14.36□□□□□ -0.11
CNOT9-205ENST00000433439 METTL21CQ5VZV1 264 aa14.36□□□□□ -0.11
CNOT9-205ENST00000433439 OR4F3Q6IEY1 312 aa14.36□□□□□ -0.11
CNOT9-205ENST00000433439 PAPD4Q6PIY7 484 aaKnown RBP14.36□□□□□ -0.11
CNOT9-205ENST00000433439 DGAT2L6Q6ZPD8 337 aa14.36□□□□□ -0.11
CNOT9-205ENST00000433439 RIMKLAQ8IXN7 391 aa14.36□□□□□ -0.11
CNOT9-205ENST00000433439 LRRC25Q8N386 305 aaPredicted RBP14.36□□□□□ -0.11
CNOT9-205ENST00000433439 ADCY4Q8NFM4 1077 aa14.36□□□□□ -0.11
CNOT9-205ENST00000433439 MTERF3Q96E29 417 aa14.36□□□□□ -0.11
CNOT9-205ENST00000433439 LPAR4Q99677 370 aa14.36□□□□□ -0.11
CNOT9-205ENST00000433439 DUSP26Q9BV47 211 aa14.36□□□□□ -0.11
CNOT9-205ENST00000433439 ADAP2Q9NPF8 381 aa14.36□□□□□ -0.11
CNOT9-205ENST00000433439 SDR39U1Q9NRG7 319 aaPredicted RBP14.36□□□□□ -0.11
CNOT9-205ENST00000433439 ATAD3AQ9NVI7 634 aa14.36□□□□□ -0.11
CNOT9-205ENST00000433439 P4HTMQ9NXG6 502 aa14.36□□□□□ -0.11
CNOT9-205ENST00000433439 ZIM2Q9NZV7 527 aa14.36□□□□□ -0.11
CNOT9-205ENST00000433439 CCDC167Q9P0B6 97 aa14.36□□□□□ -0.11
CNOT9-205ENST00000433439 FBXL4Q9UKA2 621 aa14.36□□□□□ -0.11
CNOT9-205ENST00000433439 MAPRE3Q9UPY8 281 aa14.36□□□□□ -0.11
CNOT9-205ENST00000433439 CLCA3PQ9Y6N3 262 aa14.36□□□□□ -0.11
CNOT9-205ENST00000433439 URB1O60287 2271 aaKnown RBP14.35□□□□□ -0.11
CNOT9-205ENST00000433439 NSG1A0A0A6YYJ2 146 aa14.35□□□□□ -0.11
CNOT9-205ENST00000433439 SRRM3A6NNA2 597 aaPredicted RBP14.35□□□□□ -0.11
CNOT9-205ENST00000433439 C17orf105B2RV13 164 aa14.35□□□□□ -0.11
CNOT9-205ENST00000433439 NR5A2O00482 541 aa14.35□□□□□ -0.11
CNOT9-205ENST00000433439 CFLARO15519 480 aa14.35□□□□□ -0.11
CNOT9-205ENST00000433439 CYC1P08574 325 aa14.35□□□□□ -0.11
CNOT9-205ENST00000433439 SLC35E2P0CK97 266 aa14.35□□□□□ -0.11
CNOT9-205ENST00000433439 GPX3P22352 226 aa14.35□□□□□ -0.11
CNOT9-205ENST00000433439 KIR3DL1P43629 444 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms