RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 CTU2Q2VPK5 515 aaKnown RBP3.6□□□□□ -1.83
SHPRH-205ENST00000433355 SCD5Q86SK9 330 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 NRROSQ86YC3 692 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 ADGRG2Q8IZP9 1017 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 GPR148Q8TDV2 347 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 ALG13Q9NP73 1137 aaKnown RBP3.6□□□□□ -1.83
SHPRH-205ENST00000433355 SPHK2Q9NRA0 654 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 MOKQ9UQ07 419 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 PLOD3O60568 738 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 UBL3O95164 117 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 C1GALT1C1LP0DN25 315 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 GPX3P22352 226 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 PPARDQ03181 441 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 ACSM1Q08AH1 577 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 CA9Q16790 459 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 MINDY4Q4G0A6 757 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 PRSS55Q6UWB4 352 aaPredicted RBP3.6□□□□□ -1.83
SHPRH-205ENST00000433355 GOLGA7Q7Z5G4 137 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 IFNEQ86WN2 208 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 PHTF2Q8N3S3 785 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 OR2L5Q8NG80 312 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 OR2L2Q8NH16 312 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 SP7Q8TDD2 431 aaPredicted RBP3.6□□□□□ -1.83
SHPRH-205ENST00000433355 FBLIM1Q8WUP2 373 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 FCRL1Q96LA6 429 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 ZNF587Q96SQ5 575 aaPredicted RBP3.6□□□□□ -1.83
SHPRH-205ENST00000433355 EXO5Q9H790 373 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 MRPS30Q9NP92 439 aaKnown RBP3.6□□□□□ -1.83
SHPRH-205ENST00000433355 MKKSQ9NPJ1 570 aaPredicted RBP3.6□□□□□ -1.83
SHPRH-205ENST00000433355 PLEKHA6Q9Y2H5 1048 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 MAU2Q9Y6X3 613 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 STK25O00506 426 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 RGS11O94810 467 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 CCNYL3P0C7X3 344 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 GSTT2P0CG29 244 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 UBBP0CG47 229 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 UBCP0CG48 685 aaKnown RBP3.59□□□□□ -1.83
SHPRH-205ENST00000433355 GJA5P36382 358 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 CRATP43155 626 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 PPP5CP53041 499 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 BEX3Q00994 111 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 NDUFAF6Q330K2 333 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 ZNF362Q5T0B9 420 aaPredicted RBP3.59□□□□□ -1.83
SHPRH-205ENST00000433355 ZNF618Q5T7W0 954 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 PNCKQ6P2M8 343 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 ADCK2Q7Z695 626 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 LIX1LQ8IVB5 337 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 LRRC17Q8N6Y2 441 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 OR2L8Q8NGY9 312 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 ACOT11Q8WXI4 607 aaPredicted RBP3.59□□□□□ -1.83
SHPRH-205ENST00000433355 DAZLQ92904 295 aaKnown RBP3.59□□□□□ -1.83
SHPRH-205ENST00000433355 SLC35G5Q96KT7 338 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 CDK15Q96Q40 435 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 KLHL25Q9H0H3 589 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 CBLCQ9ULV8 474 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 PIEZO2Q9H5I5 2752 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 EI24O14681 340 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 NRP1O14786 923 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 NDUFS4O43181 175 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 PQBP1O60828 265 aaKnown RBP3.59□□□□□ -1.83
SHPRH-205ENST00000433355 ZNF821O75541 412 aaPredicted RBP3.59□□□□□ -1.83
SHPRH-205ENST00000433355 ARAFP10398 606 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 CA8P35219 290 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 TAS2R31P59538 309 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 CACNB2Q08289 660 aaPredicted RBP3.59□□□□□ -1.83
SHPRH-205ENST00000433355 SCARB2Q14108 478 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 MEF2DQ14814 521 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 ELOCQ15369 112 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 UNC50Q53HI1 259 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 FAM182BQ5T319 152 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 CCNJQ5T5M9 372 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 COQ8BQ96D53 544 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 REXO4Q9GZR2 422 aaKnown RBP3.59□□□□□ -1.83
SHPRH-205ENST00000433355 PDP1Q9P0J1 537 aaPredicted RBP3.59□□□□□ -1.83
SHPRH-205ENST00000433355 IL36AQ9UHA7 158 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 PLXND1Q9Y4D7 1925 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 MTORP42345 2549 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 TMEM150CB9EJG8 249 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 J3QW42 95 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 XKRYO14609 159 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 COCHO43405 550 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 ATG12O94817 140 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 RAB40ALP0C0E4 278 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 ATP6V1B1P15313 513 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 CRHBPP24387 322 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 IL12RB1P42701 662 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 IDH2P48735 452 aaKnown RBP3.59□□□□□ -1.83
SHPRH-205ENST00000433355 BMXP51813 675 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 PDSS1Q5T2R2 415 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 TIGD3Q6B0B8 471 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 CCSAPQ6IQ19 270 aaPredicted RBP3.59□□□□□ -1.83
SHPRH-205ENST00000433355 ZNF704Q6ZNC4 412 aaPredicted RBP3.59□□□□□ -1.83
SHPRH-205ENST00000433355 RETREG3Q86VR2 466 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 LGI4Q8N135 537 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 RAB40AQ8WXH6 277 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 CNN2Q99439 309 aaKnown RBP3.59□□□□□ -1.83
SHPRH-205ENST00000433355 ACAT2Q9BWD1 397 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 RGCCQ9H4X1 137 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 PIH1D1Q9NWS0 290 aaKnown RBP3.59□□□□□ -1.83
SHPRH-205ENST00000433355 ABI3Q9P2A4 366 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms