RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 FAM230AA0A1W2PPH8 454 aa2.57□□□□□ -2
HMGB1P9-201ENST00000429856 RNF222A6NCQ9 220 aa2.57□□□□□ -2
HMGB1P9-201ENST00000429856 SHISA7A6NL88 538 aa2.57□□□□□ -2
HMGB1P9-201ENST00000429856 CCDC169A6NNP5 214 aa2.57□□□□□ -2
HMGB1P9-201ENST00000429856 HHLA1C9JL84 531 aa2.57□□□□□ -2
HMGB1P9-201ENST00000429856 SLCO1B7G3V0H7 640 aa2.57□□□□□ -2
HMGB1P9-201ENST00000429856 PDXKO00764 312 aa2.57□□□□□ -2
HMGB1P9-201ENST00000429856 SDHDO14521 159 aa2.57□□□□□ -2
HMGB1P9-201ENST00000429856 GMFGO60234 142 aa2.57□□□□□ -2
HMGB1P9-201ENST00000429856 TSC22D2O75157 780 aa2.57□□□□□ -2
HMGB1P9-201ENST00000429856 MTX2O75431 263 aa2.57□□□□□ -2
HMGB1P9-201ENST00000429856 CSDE1O75534 798 aaKnown RBP2.57□□□□□ -2
HMGB1P9-201ENST00000429856 ZNF821O75541 412 aaPredicted RBP2.57□□□□□ -2
HMGB1P9-201ENST00000429856 EML2O95834 649 aa2.57□□□□□ -2
HMGB1P9-201ENST00000429856 GOT2P00505 430 aaKnown RBP2.57□□□□□ -2
HMGB1P9-201ENST00000429856 HPRP00739 348 aa2.57□□□□□ -2
HMGB1P9-201ENST00000429856 CALCBP10092 127 aa2.57□□□□□ -2
HMGB1P9-201ENST00000429856 THRBP10828 461 aa2.57□□□□□ -2
HMGB1P9-201ENST00000429856 GLRA1P23415 457 aa2.57□□□□□ -2
HMGB1P9-201ENST00000429856 CA8P35219 290 aa2.57□□□□□ -2
HMGB1P9-201ENST00000429856 CETN2P41208 172 aa2.57□□□□□ -2
HMGB1P9-201ENST00000429856 PTGFRP43088 359 aa2.57□□□□□ -2
HMGB1P9-201ENST00000429856 SLC1A6P48664 564 aa2.57□□□□□ -2
HMGB1P9-201ENST00000429856 BACE1P56817 501 aa2.57□□□□□ -2
HMGB1P9-201ENST00000429856 CCNA1P78396 465 aa2.57□□□□□ -2
HMGB1P9-201ENST00000429856 BEX3Q00994 111 aa2.57□□□□□ -2
HMGB1P9-201ENST00000429856 CNTN2Q02246 1040 aa2.57□□□□□ -2
HMGB1P9-201ENST00000429856 CNTN1Q12860 1018 aa2.57□□□□□ -2
HMGB1P9-201ENST00000429856 SNX1Q13596 522 aa2.57□□□□□ -2
HMGB1P9-201ENST00000429856 TAF13Q15543 124 aa2.57□□□□□ -2
HMGB1P9-201ENST00000429856 ANKRD55Q3KP44 614 aa2.57□□□□□ -2
HMGB1P9-201ENST00000429856 KIAA1644Q3SXP7 199 aa2.57□□□□□ -2
HMGB1P9-201ENST00000429856 CCDC152Q4G0S7 254 aa2.57□□□□□ -2
HMGB1P9-201ENST00000429856 TMEM41BQ5BJD5 291 aa2.57□□□□□ -2
HMGB1P9-201ENST00000429856 TEX35Q5T0J7 233 aa2.57□□□□□ -2
HMGB1P9-201ENST00000429856 DCAF12Q5T6F0 453 aa2.57□□□□□ -2
HMGB1P9-201ENST00000429856 NCR3LG1Q68D85 454 aa2.57□□□□□ -2
HMGB1P9-201ENST00000429856 ASPHD2Q6ICH7 369 aa2.57□□□□□ -2
HMGB1P9-201ENST00000429856 CAPN13Q6MZZ7 669 aaPredicted RBP2.57□□□□□ -2
HMGB1P9-201ENST00000429856 C15orf52Q6ZUT6 534 aaKnown RBP2.57□□□□□ -2
HMGB1P9-201ENST00000429856 ITIH5Q86UX2 942 aa2.57□□□□□ -2
HMGB1P9-201ENST00000429856 ZDHHC21Q8IVQ6 265 aa2.57□□□□□ -2
HMGB1P9-201ENST00000429856 MISPQ8IVT2 679 aa2.57□□□□□ -2
HMGB1P9-201ENST00000429856 KIRREL3Q8IZU9 778 aa2.57□□□□□ -2
HMGB1P9-201ENST00000429856 PARP8Q8N3A8 854 aa2.57□□□□□ -2
HMGB1P9-201ENST00000429856 OR13C5Q8NGS8 318 aa2.57□□□□□ -2
HMGB1P9-201ENST00000429856 OR1L3Q8NH93 324 aa2.57□□□□□ -2
HMGB1P9-201ENST00000429856 APOBEC4Q8WW27 367 aaKnown RBP2.57□□□□□ -2
HMGB1P9-201ENST00000429856 SUSD6Q92537 303 aa2.57□□□□□ -2
HMGB1P9-201ENST00000429856 PCED1BQ96HM7 432 aa2.57□□□□□ -2
HMGB1P9-201ENST00000429856 NSL1Q96IY1 281 aa2.57□□□□□ -2
HMGB1P9-201ENST00000429856 C2orf48Q96LS8 159 aa2.57□□□□□ -2
HMGB1P9-201ENST00000429856 TCEANC2Q96MN5 208 aa2.57□□□□□ -2
HMGB1P9-201ENST00000429856 S1PR3Q99500 378 aa2.57□□□□□ -2
HMGB1P9-201ENST00000429856 GON7Q9BXV9 100 aa2.57□□□□□ -2
HMGB1P9-201ENST00000429856 MRPL13Q9BYD1 178 aaKnown RBP2.57□□□□□ -2
HMGB1P9-201ENST00000429856 NACAP1Q9BZK3 213 aa2.57□□□□□ -2
HMGB1P9-201ENST00000429856 WWP1Q9H0M0 922 aa2.57□□□□□ -2
HMGB1P9-201ENST00000429856 GANQ9H2C0 597 aa2.57□□□□□ -2
HMGB1P9-201ENST00000429856 VAT1LQ9HCJ6 419 aa2.57□□□□□ -2
HMGB1P9-201ENST00000429856 SCRT2Q9NQ03 307 aa2.57□□□□□ -2
HMGB1P9-201ENST00000429856 HPS4Q9NQG7 708 aa2.57□□□□□ -2
HMGB1P9-201ENST00000429856 INTS9Q9NV88 658 aaKnown RBP2.57□□□□□ -2
HMGB1P9-201ENST00000429856 PLEK2Q9NYT0 353 aa2.57□□□□□ -2
HMGB1P9-201ENST00000429856 IL36AQ9UHA7 158 aa2.57□□□□□ -2
HMGB1P9-201ENST00000429856 FBXL4Q9UKA2 621 aa2.57□□□□□ -2
HMGB1P9-201ENST00000429856 SMC3Q9UQE7 1217 aa2.57□□□□□ -2
HMGB1P9-201ENST00000429856 ERVK-19Q9WJR5 959 aa2.57□□□□□ -2
HMGB1P9-201ENST00000429856 KIF7Q2M1P5 1343 aa2.57□□□□□ -2
HMGB1P9-201ENST00000429856 A0A087WUV0 522 aaPredicted RBP2.56□□□□□ -2
HMGB1P9-201ENST00000429856 ANKRD30BLA7E2S9 258 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 ERI2A8K979 691 aaKnown RBP2.56□□□□□ -2
HMGB1P9-201ENST00000429856 LMO7DNF2Z398 122 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 SGK1O00141 431 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 CYTIPO60759 359 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 ZG16O60844 167 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 NEBLO76041 1014 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 TM7SF2O76062 418 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 DFFBO76075 338 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 OR4F21O95013 312 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 CLPTM1O96005 669 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 EDN1P05305 212 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 ASNSP08243 561 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 FAM157CP0CG43 387 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 RRASP10301 218 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 RALAP11233 206 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 TOP1P11387 765 aaKnown RBP2.56□□□□□ -2
HMGB1P9-201ENST00000429856 SELEP16581 610 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 CA6P23280 308 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 STIP1P31948 543 aaKnown RBP2.56□□□□□ -2
HMGB1P9-201ENST00000429856 TRIM23P36406 574 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 SLC1A3P43003 542 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 SLC6A8P48029 635 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 NPY2RP49146 381 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 SSTP61278 116 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 ERVK11-1P61568 191 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 NAAAQ02083 359 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 GBE1Q04446 702 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 GABPAQ06546 454 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 MFGE8Q08431 387 aaPredicted RBP2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms