RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 AP2A2O94973 939 aa4.22□□□□□ -1.73
HMGB3P5-201ENST00000428894 IGHV4-59P01825 116 aa4.22□□□□□ -1.73
HMGB3P5-201ENST00000428894 RPSAP08865 295 aaKnown RBP4.22□□□□□ -1.73
HMGB3P5-201ENST00000428894 ADSSP30520 456 aa4.22□□□□□ -1.73
HMGB3P5-201ENST00000428894 KRT2P35908 639 aa4.22□□□□□ -1.73
HMGB3P5-201ENST00000428894 PPARGP37231 505 aaPredicted RBP4.22□□□□□ -1.73
HMGB3P5-201ENST00000428894 CAMPP49913 170 aa4.22□□□□□ -1.73
HMGB3P5-201ENST00000428894 PSMD7P51665 324 aa4.22□□□□□ -1.73
HMGB3P5-201ENST00000428894 CSE1LP55060 971 aaKnown RBP4.22□□□□□ -1.73
HMGB3P5-201ENST00000428894 SNX16P57768 344 aa4.22□□□□□ -1.73
HMGB3P5-201ENST00000428894 PRAMEP78395 509 aa4.22□□□□□ -1.73
HMGB3P5-201ENST00000428894 MYL7Q01449 175 aa4.22□□□□□ -1.73
HMGB3P5-201ENST00000428894 LGALS3BPQ08380 585 aa4.22□□□□□ -1.73
HMGB3P5-201ENST00000428894 COX10Q12887 443 aa4.22□□□□□ -1.73
HMGB3P5-201ENST00000428894 RCN1Q15293 331 aa4.22□□□□□ -1.73
HMGB3P5-201ENST00000428894 ASTE1Q2TB18 679 aaPredicted RBP4.22□□□□□ -1.73
HMGB3P5-201ENST00000428894 GCNT6Q5T4J0 391 aa4.22□□□□□ -1.73
HMGB3P5-201ENST00000428894 SPATA1Q5VX52 437 aa4.22□□□□□ -1.73
HMGB3P5-201ENST00000428894 ARMC3Q5W041 872 aa4.22□□□□□ -1.73
HMGB3P5-201ENST00000428894 HAUS3Q68CZ6 603 aa4.22□□□□□ -1.73
HMGB3P5-201ENST00000428894 CORO6Q6QEF8 472 aa4.22□□□□□ -1.73
HMGB3P5-201ENST00000428894 SPATA21Q7Z572 469 aa4.22□□□□□ -1.73
HMGB3P5-201ENST00000428894 LSMEM2Q8N112 164 aa4.22□□□□□ -1.73
HMGB3P5-201ENST00000428894 GBP7Q8N8V2 638 aaPredicted RBP4.22□□□□□ -1.73
HMGB3P5-201ENST00000428894 ZNF383Q8NA42 475 aa4.22□□□□□ -1.73
HMGB3P5-201ENST00000428894 OR10T2Q8NGX3 314 aa4.22□□□□□ -1.73
HMGB3P5-201ENST00000428894 GOLGA5Q8TBA6 731 aa4.22□□□□□ -1.73
HMGB3P5-201ENST00000428894 LRRC15Q8TF66 581 aa4.22□□□□□ -1.73
HMGB3P5-201ENST00000428894 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.22□□□□□ -1.73
HMGB3P5-201ENST00000428894 DAZLQ92904 295 aaKnown RBP4.22□□□□□ -1.73
HMGB3P5-201ENST00000428894 SKA1Q96BD8 255 aa4.22□□□□□ -1.73
HMGB3P5-201ENST00000428894 MED8Q96G25 268 aa4.22□□□□□ -1.73
HMGB3P5-201ENST00000428894 EPSTI1Q96J88 318 aa4.22□□□□□ -1.73
HMGB3P5-201ENST00000428894 CMTM3Q96MX0 182 aa4.22□□□□□ -1.73
HMGB3P5-201ENST00000428894 JAKMIP1Q96N16 626 aaKnown RBP4.22□□□□□ -1.73
HMGB3P5-201ENST00000428894 DACH2Q96NX9 599 aa4.22□□□□□ -1.73
HMGB3P5-201ENST00000428894 XPO6Q96QU8 1125 aaKnown RBP4.22□□□□□ -1.73
HMGB3P5-201ENST00000428894 SLC22A12Q96S37 553 aa4.22□□□□□ -1.73
HMGB3P5-201ENST00000428894 ACBD6Q9BR61 282 aa4.22□□□□□ -1.73
HMGB3P5-201ENST00000428894 TRIM51Q9BSJ1 452 aa4.22□□□□□ -1.73
HMGB3P5-201ENST00000428894 CABLES2Q9BTV7 478 aa4.22□□□□□ -1.73
HMGB3P5-201ENST00000428894 KIFC3Q9BVG8 833 aa4.22□□□□□ -1.73
HMGB3P5-201ENST00000428894 NUP58Q9BVL2 599 aa4.22□□□□□ -1.73
HMGB3P5-201ENST00000428894 TIPINQ9BVW5 301 aa4.22□□□□□ -1.73
HMGB3P5-201ENST00000428894 XPO4Q9C0E2 1151 aaKnown RBP4.22□□□□□ -1.73
HMGB3P5-201ENST00000428894 MUC13Q9H3R2 512 aa4.22□□□□□ -1.73
HMGB3P5-201ENST00000428894 TMEM165Q9HC07 324 aa4.22□□□□□ -1.73
HMGB3P5-201ENST00000428894 WSB2Q9NYS7 404 aaPredicted RBP4.22□□□□□ -1.73
HMGB3P5-201ENST00000428894 TBC1D7Q9P0N9 293 aa4.22□□□□□ -1.73
HMGB3P5-201ENST00000428894 GCNT4Q9P109 453 aa4.22□□□□□ -1.73
HMGB3P5-201ENST00000428894 NENFQ9UMX5 172 aa4.22□□□□□ -1.73
HMGB3P5-201ENST00000428894 WDR37Q9Y2I8 494 aa4.22□□□□□ -1.73
HMGB3P5-201ENST00000428894 RRP15Q9Y3B9 282 aaKnown RBP4.22□□□□□ -1.73
HMGB3P5-201ENST00000428894 SESN1Q9Y6P5 492 aa4.22□□□□□ -1.73
HMGB3P5-201ENST00000428894 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.22□□□□□ -1.73
HMGB3P5-201ENST00000428894 PTPN13Q12923 2485 aa4.22□□□□□ -1.73
HMGB3P5-201ENST00000428894 SCN1AP35498 2009 aa4.22□□□□□ -1.73
HMGB3P5-201ENST00000428894 MUC22E2RYF6 1773 aaPredicted RBP4.22□□□□□ -1.73
HMGB3P5-201ENST00000428894 GTPBP10A4D1E9 387 aaKnown RBP4.21□□□□□ -1.74
HMGB3P5-201ENST00000428894 ENO4A6NNW6 628 aa4.21□□□□□ -1.74
HMGB3P5-201ENST00000428894 PRR32B1ATL7 298 aa4.21□□□□□ -1.74
HMGB3P5-201ENST00000428894 NDUFS4O43181 175 aa4.21□□□□□ -1.74
HMGB3P5-201ENST00000428894 PAPSS1O43252 624 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P5-201ENST00000428894 MED24O75448 989 aa4.21□□□□□ -1.74
HMGB3P5-201ENST00000428894 ZFAND5O76080 213 aa4.21□□□□□ -1.74
HMGB3P5-201ENST00000428894 LDOC1O95751 146 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P5-201ENST00000428894 RAF1P04049 648 aa4.21□□□□□ -1.74
HMGB3P5-201ENST00000428894 ADRB2P07550 413 aa4.21□□□□□ -1.74
HMGB3P5-201ENST00000428894 CXCL8P10145 99 aa4.21□□□□□ -1.74
HMGB3P5-201ENST00000428894 ACADMP11310 421 aa4.21□□□□□ -1.74
HMGB3P5-201ENST00000428894 ANXA13P27216 316 aa4.21□□□□□ -1.74
HMGB3P5-201ENST00000428894 NMBRP28336 390 aa4.21□□□□□ -1.74
HMGB3P5-201ENST00000428894 OAS2P29728 719 aaKnown RBP4.21□□□□□ -1.74
HMGB3P5-201ENST00000428894 GCKP35557 465 aa4.21□□□□□ -1.74
HMGB3P5-201ENST00000428894 TNFSF9P41273 254 aa4.21□□□□□ -1.74
HMGB3P5-201ENST00000428894 SLC6A12P48065 614 aa4.21□□□□□ -1.74
HMGB3P5-201ENST00000428894 DSCR10P59022 87 aa4.21□□□□□ -1.74
HMGB3P5-201ENST00000428894 SLC7A9P82251 487 aa4.21□□□□□ -1.74
HMGB3P5-201ENST00000428894 SPAG1Q07617 926 aa4.21□□□□□ -1.74
HMGB3P5-201ENST00000428894 MRPL28Q13084 256 aaKnown RBP4.21□□□□□ -1.74
HMGB3P5-201ENST00000428894 PLA2G7Q13093 441 aa4.21□□□□□ -1.74
HMGB3P5-201ENST00000428894 ILKQ13418 452 aa4.21□□□□□ -1.74
HMGB3P5-201ENST00000428894 CRYMQ14894 314 aa4.21□□□□□ -1.74
HMGB3P5-201ENST00000428894 P2RY6Q15077 328 aa4.21□□□□□ -1.74
HMGB3P5-201ENST00000428894 CFAP221Q4G0U5 840 aa4.21□□□□□ -1.74
HMGB3P5-201ENST00000428894 KIAA0930Q6ICG6 404 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P5-201ENST00000428894 C4orf50Q6ZRC1 276 aa4.21□□□□□ -1.74
HMGB3P5-201ENST00000428894 ZNF554Q86TJ5 538 aa4.21□□□□□ -1.74
HMGB3P5-201ENST00000428894 MARCH9Q86YJ5 346 aa4.21□□□□□ -1.74
HMGB3P5-201ENST00000428894 TICAM1Q8IUC6 712 aa4.21□□□□□ -1.74
HMGB3P5-201ENST00000428894 TMEM86AQ8N2M4 240 aa4.21□□□□□ -1.74
HMGB3P5-201ENST00000428894 TMEM178AQ8NBL3 297 aa4.21□□□□□ -1.74
HMGB3P5-201ENST00000428894 SCFD1Q8WVM8 642 aa4.21□□□□□ -1.74
HMGB3P5-201ENST00000428894 TEKT4Q8WW24 435 aa4.21□□□□□ -1.74
HMGB3P5-201ENST00000428894 ERP27Q96DN0 273 aa4.21□□□□□ -1.74
HMGB3P5-201ENST00000428894 DTNBP1Q96EV8 351 aa4.21□□□□□ -1.74
HMGB3P5-201ENST00000428894 NSL1Q96IY1 281 aa4.21□□□□□ -1.74
HMGB3P5-201ENST00000428894 ZNF578Q96N58 590 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P5-201ENST00000428894 LGMNQ99538 433 aa4.21□□□□□ -1.74
HMGB3P5-201ENST00000428894 GABRG3Q99928 467 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms