RNA–Protein interactions for RNA: ENST00000425804.1

R3HDM1-205, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-205ENST00000425804 SFXN2Q96NB2 322 aa2.32□□□□□ -2.04
R3HDM1-205ENST00000425804 PGLYRP2Q96PD5 576 aa2.32□□□□□ -2.04
R3HDM1-205ENST00000425804 BTBD9Q96Q07 612 aa2.32□□□□□ -2.04
R3HDM1-205ENST00000425804 MYADMQ96S97 322 aa2.32□□□□□ -2.04
R3HDM1-205ENST00000425804 ACOX2Q99424 681 aa2.32□□□□□ -2.04
R3HDM1-205ENST00000425804 FEVQ99581 238 aa2.32□□□□□ -2.04
R3HDM1-205ENST00000425804 EPYCQ99645 322 aa2.32□□□□□ -2.04
R3HDM1-205ENST00000425804 OLFM1Q99784 485 aa2.32□□□□□ -2.04
R3HDM1-205ENST00000425804 ZNF559Q9BR84 538 aa2.32□□□□□ -2.04
R3HDM1-205ENST00000425804 PYGO2Q9BRQ0 406 aa2.32□□□□□ -2.04
R3HDM1-205ENST00000425804 SLC25A33Q9BSK2 321 aa2.32□□□□□ -2.04
R3HDM1-205ENST00000425804 ALG12Q9BV10 488 aa2.32□□□□□ -2.04
R3HDM1-205ENST00000425804 FTHL17Q9BXU8 183 aa2.32□□□□□ -2.04
R3HDM1-205ENST00000425804 IQCGQ9H095 443 aaKnown RBP2.32□□□□□ -2.04
R3HDM1-205ENST00000425804 TRPV6Q9H1D0 765 aa2.32□□□□□ -2.04
R3HDM1-205ENST00000425804 PIGMQ9H3S5 423 aa2.32□□□□□ -2.04
R3HDM1-205ENST00000425804 CUEDC2Q9H467 287 aa2.32□□□□□ -2.04
R3HDM1-205ENST00000425804 MAGIXQ9H6Y5 334 aa2.32□□□□□ -2.04
R3HDM1-205ENST00000425804 WDR76Q9H967 626 aa2.32□□□□□ -2.04
R3HDM1-205ENST00000425804 ACTR8Q9H981 624 aa2.32□□□□□ -2.04
R3HDM1-205ENST00000425804 FN3KRPQ9HA64 309 aa2.32□□□□□ -2.04
R3HDM1-205ENST00000425804 KCNK13Q9HB14 408 aa2.32□□□□□ -2.04
R3HDM1-205ENST00000425804 PARVGQ9HBI0 331 aa2.32□□□□□ -2.04
R3HDM1-205ENST00000425804 PIGVQ9NUD9 493 aa2.32□□□□□ -2.04
R3HDM1-205ENST00000425804 GTSE1Q9NYZ3 720 aa2.32□□□□□ -2.04
R3HDM1-205ENST00000425804 CNOT2Q9NZN8 540 aaKnown RBP2.32□□□□□ -2.04
R3HDM1-205ENST00000425804 ATXN10Q9UBB4 475 aa2.32□□□□□ -2.04
R3HDM1-205ENST00000425804 HBS1LQ9Y450 684 aaKnown RBP2.32□□□□□ -2.04
R3HDM1-205ENST00000425804 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.32□□□□□ -2.04
R3HDM1-205ENST00000425804 V9GYY5 206 aaPredicted RBP2.32□□□□□ -2.04
R3HDM1-205ENST00000425804 SF3B1O75533 1304 aaKnown RBP eCLIP2.32□□□□□ -2.045e-6■■■■■ 76.6
R3HDM1-205ENST00000425804 SH3TC1Q8TE82 1336 aa2.32□□□□□ -2.04
R3HDM1-205ENST00000425804 CDHR2Q9BYE9 1310 aa2.32□□□□□ -2.04
R3HDM1-205ENST00000425804 UBR3Q6ZT12 1888 aa2.32□□□□□ -2.04
R3HDM1-205ENST00000425804 ADCY9O60503 1353 aa2.32□□□□□ -2.04
R3HDM1-205ENST00000425804 CARMIL3Q8ND23 1372 aa2.32□□□□□ -2.04
R3HDM1-205ENST00000425804 MYH14Q7Z406 1995 aaKnown RBP2.32□□□□□ -2.04
R3HDM1-205ENST00000425804 C4AP0C0L4 1744 aa2.31□□□□□ -2.04
R3HDM1-205ENST00000425804 COL24A1Q17RW2 1714 aa2.31□□□□□ -2.04
R3HDM1-205ENST00000425804 DDX60Q8IY21 1712 aaKnown RBP2.31□□□□□ -2.04
R3HDM1-205ENST00000425804 MYH13Q9UKX3 1938 aa2.31□□□□□ -2.04
R3HDM1-205ENST00000425804 A0A1B0GTQ1 180 aa2.31□□□□□ -2.04
R3HDM1-205ENST00000425804 A0A1W2PN81 502 aa2.31□□□□□ -2.04
R3HDM1-205ENST00000425804 A0A1W2PPQ1 181 aa2.31□□□□□ -2.04
R3HDM1-205ENST00000425804 C17orf102A2RUQ5 167 aa2.31□□□□□ -2.04
R3HDM1-205ENST00000425804 MBLAC1A4D2B0 266 aaPredicted RBP2.31□□□□□ -2.04
R3HDM1-205ENST00000425804 TMEM8BA6NDV4 472 aa2.31□□□□□ -2.04
R3HDM1-205ENST00000425804 HELTA6NFD8 242 aa2.31□□□□□ -2.04
R3HDM1-205ENST00000425804 ANKUB1A6NFN9 424 aa2.31□□□□□ -2.04
R3HDM1-205ENST00000425804 PCP4L1A6NKN8 68 aa2.31□□□□□ -2.04
R3HDM1-205ENST00000425804 OR52A4PA6NMU1 304 aa2.31□□□□□ -2.04
R3HDM1-205ENST00000425804 ANKRD30BLA7E2S9 258 aa2.31□□□□□ -2.04
R3HDM1-205ENST00000425804 K7ERQ8 282 aa2.31□□□□□ -2.04
R3HDM1-205ENST00000425804 HIP1O00291 1037 aa2.31□□□□□ -2.04
R3HDM1-205ENST00000425804 VCYO14598 125 aa2.31□□□□□ -2.04
R3HDM1-205ENST00000425804 TIMM23O14925 209 aa2.31□□□□□ -2.04
R3HDM1-205ENST00000425804 ZNF208O43345 1280 aa2.31□□□□□ -2.04
R3HDM1-205ENST00000425804 SSX4O60224 188 aa2.31□□□□□ -2.04
R3HDM1-205ENST00000425804 PCCAP05165 728 aaPredicted RBP2.31□□□□□ -2.04
R3HDM1-205ENST00000425804 ICAM1P05362 532 aa2.31□□□□□ -2.04
R3HDM1-205ENST00000425804 FHP07954 510 aa2.31□□□□□ -2.04
R3HDM1-205ENST00000425804 HMBSP08397 361 aa2.31□□□□□ -2.04
R3HDM1-205ENST00000425804 MYZAPP0CAP1 466 aa2.31□□□□□ -2.04
R3HDM1-205ENST00000425804 RRASP10301 218 aa2.31□□□□□ -2.04
R3HDM1-205ENST00000425804 SAGP10523 405 aaPredicted RBP2.31□□□□□ -2.04
R3HDM1-205ENST00000425804 SLC2A3P11169 496 aa2.31□□□□□ -2.04
R3HDM1-205ENST00000425804 ENO3P13929 434 aaPredicted RBP2.31□□□□□ -2.04
R3HDM1-205ENST00000425804 GCFC2P16383 781 aaKnown RBP2.31□□□□□ -2.04
R3HDM1-205ENST00000425804 CD22P20273 847 aa2.31□□□□□ -2.04
R3HDM1-205ENST00000425804 CPN2P22792 545 aa2.31□□□□□ -2.04
R3HDM1-205ENST00000425804 CHMLP26374 656 aa2.31□□□□□ -2.04
R3HDM1-205ENST00000425804 ELAVL4P26378 380 aaKnown RBP2.31□□□□□ -2.04
R3HDM1-205ENST00000425804 NMBRP28336 390 aa2.31□□□□□ -2.04
R3HDM1-205ENST00000425804 PRDX6P30041 224 aa2.31□□□□□ -2.04
R3HDM1-205ENST00000425804 C21orf33P30042 268 aaPredicted RBP2.31□□□□□ -2.04
R3HDM1-205ENST00000425804 GABRA5P31644 462 aa2.31□□□□□ -2.04
R3HDM1-205ENST00000425804 NF2P35240 595 aa2.31□□□□□ -2.04
R3HDM1-205ENST00000425804 CHI3L1P36222 383 aaPredicted RBP2.31□□□□□ -2.04
R3HDM1-205ENST00000425804 CHRNA7P36544 502 aa2.31□□□□□ -2.04
R3HDM1-205ENST00000425804 CDKN1BP46527 198 aa2.31□□□□□ -2.04
R3HDM1-205ENST00000425804 LHX1P48742 406 aa2.31□□□□□ -2.04
R3HDM1-205ENST00000425804 STARP49675 285 aa2.31□□□□□ -2.04
R3HDM1-205ENST00000425804 MTCP1P56278 107 aa2.31□□□□□ -2.04
R3HDM1-205ENST00000425804 SLC8A3P57103 927 aa2.31□□□□□ -2.04
R3HDM1-205ENST00000425804 SNRPEP62304 92 aaKnown RBP2.31□□□□□ -2.04
R3HDM1-205ENST00000425804 POLR2LP62875 67 aaKnown RBP2.31□□□□□ -2.04
R3HDM1-205ENST00000425804 CBX1P83916 185 aa2.31□□□□□ -2.04
R3HDM1-205ENST00000425804 PPP2R2BQ00005 443 aa2.31□□□□□ -2.04
R3HDM1-205ENST00000425804 SLC34A1Q06495 639 aa2.31□□□□□ -2.04
R3HDM1-205ENST00000425804 SPOCK1Q08629 439 aa2.31□□□□□ -2.04
R3HDM1-205ENST00000425804 MYBPHQ13203 477 aa2.31□□□□□ -2.04
R3HDM1-205ENST00000425804 ITGADQ13349 1161 aa2.31□□□□□ -2.04
R3HDM1-205ENST00000425804 ARHGEF6Q15052 776 aa2.31□□□□□ -2.04
R3HDM1-205ENST00000425804 KRT31Q15323 416 aa2.31□□□□□ -2.04
R3HDM1-205ENST00000425804 BCL7AQ4VC05 210 aa2.31□□□□□ -2.04
R3HDM1-205ENST00000425804 SPANXN2Q5MJ10 180 aa2.31□□□□□ -2.04
R3HDM1-205ENST00000425804 LIN9Q5TKA1 542 aa2.31□□□□□ -2.04
R3HDM1-205ENST00000425804 TTC19Q6DKK2 380 aaPredicted RBP2.31□□□□□ -2.04
R3HDM1-205ENST00000425804 PRR27Q6MZM9 219 aa2.31□□□□□ -2.04
R3HDM1-205ENST00000425804 LRRC8BQ6P9F7 803 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms