RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 GADD45GO95257 159 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 KRT75O95678 551 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 ADH1BP00325 375 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 IFNA14P01570 189 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 DBTP11182 482 aaKnown RBP10.14□□□□□ -0.79
CUX1-205ENST00000425244 SRFP11831 508 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 GADD45AP24522 165 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 CTSKP43235 329 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 DSTNP60981 165 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 RELAQ04206 551 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 RBBP4Q09028 425 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 HSPB3Q12988 150 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 FADDQ13158 208 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 ZNF630Q2M218 657 aaPredicted RBP10.14□□□□□ -0.79
CUX1-205ENST00000425244 SPDYE7PQ495Y7 208 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 NIPAL1Q6NVV3 410 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 CEACAM20Q6UY09 585 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 VN1R5Q7Z5H4 357 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 LRRC56Q8IYG6 542 aaPredicted RBP10.14□□□□□ -0.79
CUX1-205ENST00000425244 MFSD4AQ8N468 514 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 AQP11Q8NBQ7 271 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 FBXO15Q8NCQ5 510 aaPredicted RBP10.14□□□□□ -0.79
CUX1-205ENST00000425244 MCFD2Q8NI22 146 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 SLC38A4Q969I6 547 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 WDR34Q96EX3 536 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 VMP1Q96GC9 406 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 F2RL3Q96RI0 385 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 HDAC8Q9BY41 377 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 NLNQ9BYT8 704 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 C6orf62Q9GZU0 229 aaPredicted RBP10.14□□□□□ -0.79
CUX1-205ENST00000425244 EPHX3Q9H6B9 360 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 CXorf36Q9H7Y0 433 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 POLE4Q9NR33 117 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 TM7SF3Q9NS93 570 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 OR1A2Q9Y585 309 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 PCDHGA2Q9Y5H1 932 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 FEZF1A0PJY2 475 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 CLCA1A8K7I4 914 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 CCNB2O95067 398 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 BCHEP06276 602 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 PTX3P26022 381 aaPredicted RBP10.14□□□□□ -0.79
CUX1-205ENST00000425244 MAPK12P53778 367 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 RAB15P59190 212 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 IFITM3Q01628 133 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 E2F2Q14209 437 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 SOWAHCQ53LP3 525 aaPredicted RBP10.14□□□□□ -0.79
CUX1-205ENST00000425244 UBE2UQ5VVX9 321 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 KRT78Q8N1N4 520 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 RHOXF1Q8NHV9 184 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 PSMA8Q8TAA3 256 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 RAB8BQ92930 207 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 UBE2E3Q969T4 207 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 MRGPRX1Q96LB2 322 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 DACH2Q96NX9 599 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 TMEM38AQ9H6F2 299 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 EPS8L2Q9H6S3 715 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 CUEDC1Q9NWM3 386 aaPredicted RBP10.14□□□□□ -0.79
CUX1-205ENST00000425244 C2orf42Q9NWW7 574 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 MS4A12Q9NXJ0 267 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 ZNF226Q9NYT6 803 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 FBXL21Q9UKT6 434 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 A0A0G2JN53 185 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 SHISA7A6NL88 538 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 M0R082 166 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 IFNW1P05000 195 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 SERPIND1P05546 499 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 CDK1P06493 297 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 PSMB5P28074 263 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 ACADLP28330 430 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 GRK3P35626 688 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 MANFP55145 182 aaKnown RBP10.14□□□□□ -0.79
CUX1-205ENST00000425244 CSNK2BP67870 215 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 EEF1A2Q05639 463 aaKnown RBP10.14□□□□□ -0.79
CUX1-205ENST00000425244 ST3GAL4Q11206 333 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 CCINQ13939 588 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 DUSP7Q16829 419 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 SLC9B2Q86UD5 537 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 OR2L2Q8NH16 312 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 TFGQ92734 400 aaPredicted RBP10.14□□□□□ -0.79
CUX1-205ENST00000425244 RAD51AP1Q96B01 352 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 GABRG3Q99928 467 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 SLIRPQ9GZT3 109 aaKnown RBP10.14□□□□□ -0.79
CUX1-205ENST00000425244 RNF167Q9H6Y7 350 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 ACER3Q9NUN7 267 aa10.14□□□□□ -0.79
CUX1-205ENST00000425244 PLPP1O14494 284 aa10.13□□□□□ -0.79
CUX1-205ENST00000425244 MRPS14O60783 128 aaKnown RBP10.13□□□□□ -0.79
CUX1-205ENST00000425244 STATHP02808 62 aa10.13□□□□□ -0.79
CUX1-205ENST00000425244 ARAFP10398 606 aa10.13□□□□□ -0.79
CUX1-205ENST00000425244 NDUFV2P19404 249 aa10.13□□□□□ -0.79
CUX1-205ENST00000425244 PIK3CBP42338 1070 aa10.13□□□□□ -0.79
CUX1-205ENST00000425244 XCR1P46094 333 aa10.13□□□□□ -0.79
CUX1-205ENST00000425244 PXNP49023 591 aaPredicted RBP10.13□□□□□ -0.79
CUX1-205ENST00000425244 LEXMQ3ZCV2 418 aa10.13□□□□□ -0.79
CUX1-205ENST00000425244 ADCK2Q7Z695 626 aa10.13□□□□□ -0.79
CUX1-205ENST00000425244 AMZ2Q86W34 360 aa10.13□□□□□ -0.79
CUX1-205ENST00000425244 C17orf64Q86WR6 236 aa10.13□□□□□ -0.79
CUX1-205ENST00000425244 HEATR4Q86WZ0 1026 aa10.13□□□□□ -0.79
CUX1-205ENST00000425244 DEPDC4Q8N2C3 294 aa10.13□□□□□ -0.79
CUX1-205ENST00000425244 ZNF675Q8TD23 568 aa10.13□□□□□ -0.79
CUX1-205ENST00000425244 FCGR1BQ92637 280 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms