RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 SLAMF1Q13291 335 aa13.77□□□□□ -0.21
ATG4B-209ENST00000425239 BIKQ13323 160 aa13.77□□□□□ -0.21
ATG4B-209ENST00000425239 FBXL19-AS1Q494R0 122 aa13.77□□□□□ -0.21
ATG4B-209ENST00000425239 PAGE2BQ5JRK9 111 aa13.77□□□□□ -0.21
ATG4B-209ENST00000425239 FNDC7Q5VTL7 733 aa13.77□□□□□ -0.21
ATG4B-209ENST00000425239 KHDRBS2Q5VWX1 349 aaKnown RBP13.77□□□□□ -0.21
ATG4B-209ENST00000425239 C18orf63Q68DL7 685 aa13.77□□□□□ -0.21
ATG4B-209ENST00000425239 MRM1Q6IN84 353 aaKnown RBP13.77□□□□□ -0.21
ATG4B-209ENST00000425239 ZBED8Q8IZ13 594 aa13.77□□□□□ -0.21
ATG4B-209ENST00000425239 FBXW8Q8N3Y1 598 aa13.77□□□□□ -0.21
ATG4B-209ENST00000425239 ZNF441Q8N8Z8 693 aa13.77□□□□□ -0.21
ATG4B-209ENST00000425239 SNX31Q8N9S9 440 aa13.77□□□□□ -0.21
ATG4B-209ENST00000425239 TNIP2Q8NFZ5 429 aa13.77□□□□□ -0.21
ATG4B-209ENST00000425239 OR10G3Q8NGC4 313 aa13.77□□□□□ -0.21
ATG4B-209ENST00000425239 NEIL3Q8TAT5 605 aa13.77□□□□□ -0.21
ATG4B-209ENST00000425239 DOK4Q8TEW6 326 aa13.77□□□□□ -0.21
ATG4B-209ENST00000425239 UCN3Q969E3 161 aa13.77□□□□□ -0.21
ATG4B-209ENST00000425239 ATOH8Q96SQ7 321 aa13.77□□□□□ -0.21
ATG4B-209ENST00000425239 RBBP8Q99708 897 aa13.77□□□□□ -0.21
ATG4B-209ENST00000425239 POLDIP3Q9BY77 421 aaKnown RBP13.77□□□□□ -0.21
ATG4B-209ENST00000425239 OR51B5Q9H339 312 aa13.77□□□□□ -0.21
ATG4B-209ENST00000425239 LDAHQ9H6V9 325 aa13.77□□□□□ -0.21
ATG4B-209ENST00000425239 RPF2Q9H7B2 306 aaKnown RBP13.77□□□□□ -0.21
ATG4B-209ENST00000425239 QPCTLQ9NXS2 382 aa13.77□□□□□ -0.21
ATG4B-209ENST00000425239 FLNAP21333 2647 aaKnown RBP13.77□□□□□ -0.21
ATG4B-209ENST00000425239 ANKRD33BA6NCL7 494 aa13.76□□□□□ -0.21
ATG4B-209ENST00000425239 FAM159BA6NKW6 160 aa13.76□□□□□ -0.21
ATG4B-209ENST00000425239 PLPP1O14494 284 aa13.76□□□□□ -0.21
ATG4B-209ENST00000425239 CCNT2O60583 730 aaKnown RBP13.76□□□□□ -0.21
ATG4B-209ENST00000425239 PRKRAO75569 313 aaKnown RBP13.76□□□□□ -0.21
ATG4B-209ENST00000425239 EPPINO95925 133 aa13.76□□□□□ -0.21
ATG4B-209ENST00000425239 MTHFD2P13995 350 aa13.76□□□□□ -0.21
ATG4B-209ENST00000425239 KLK2P20151 261 aa13.76□□□□□ -0.21
ATG4B-209ENST00000425239 CPN2P22792 545 aa13.76□□□□□ -0.21
ATG4B-209ENST00000425239 KIR2DL3P43628 341 aa13.76□□□□□ -0.21
ATG4B-209ENST00000425239 HNRNPH2P55795 449 aaKnown RBP13.76□□□□□ -0.21
ATG4B-209ENST00000425239 ILF2Q12905 390 aaKnown RBP13.76□□□□□ -0.21
ATG4B-209ENST00000425239 NTRK2Q16620 822 aa13.76□□□□□ -0.21
ATG4B-209ENST00000425239 HIST2H2ACQ16777 129 aaPredicted RBP13.76□□□□□ -0.21
ATG4B-209ENST00000425239 SPRED3Q2MJR0 410 aa13.76□□□□□ -0.21
ATG4B-209ENST00000425239 AP5B1Q2VPB7 878 aa13.76□□□□□ -0.21
ATG4B-209ENST00000425239 PRAMEF20Q5VT98 475 aa13.76□□□□□ -0.21
ATG4B-209ENST00000425239 HIST2H2AA3Q6FI13 130 aa13.76□□□□□ -0.21
ATG4B-209ENST00000425239 CHSY3Q70JA7 882 aa13.76□□□□□ -0.21
ATG4B-209ENST00000425239 C7orf57Q8NEG2 295 aa13.76□□□□□ -0.21
ATG4B-209ENST00000425239 TANKQ92844 425 aa13.76□□□□□ -0.21
ATG4B-209ENST00000425239 CMTM7Q96FZ5 175 aa13.76□□□□□ -0.21
ATG4B-209ENST00000425239 RBM18Q96H35 190 aaKnown RBP13.76□□□□□ -0.21
ATG4B-209ENST00000425239 RUNDC3BQ96NL0 473 aa13.76□□□□□ -0.21
ATG4B-209ENST00000425239 TIMP4Q99727 224 aa13.76□□□□□ -0.21
ATG4B-209ENST00000425239 GPATCH1Q9BRR8 931 aaKnown RBP13.76□□□□□ -0.21
ATG4B-209ENST00000425239 TRIM31Q9BZY9 425 aa13.76□□□□□ -0.21
ATG4B-209ENST00000425239 SLC6A15Q9H2J7 730 aa13.76□□□□□ -0.21
ATG4B-209ENST00000425239 UBQLN3Q9H347 655 aa13.76□□□□□ -0.21
ATG4B-209ENST00000425239 ALKBH4Q9NXW9 302 aa13.76□□□□□ -0.21
ATG4B-209ENST00000425239 CD274Q9NZQ7 290 aa13.76□□□□□ -0.21
ATG4B-209ENST00000425239 CNIH4Q9P003 139 aa13.76□□□□□ -0.21
ATG4B-209ENST00000425239 B4GALT7Q9UBV7 327 aa13.76□□□□□ -0.21
ATG4B-209ENST00000425239 COPS7AQ9UBW8 275 aa13.76□□□□□ -0.21
ATG4B-209ENST00000425239 SNX24Q9Y343 169 aa13.76□□□□□ -0.21
ATG4B-209ENST00000425239 TSC22D4Q9Y3Q8 395 aa13.76□□□□□ -0.21
ATG4B-209ENST00000425239 ASB4Q9Y574 426 aa13.76□□□□□ -0.21
ATG4B-209ENST00000425239 IKBKGQ9Y6K9 419 aa13.76□□□□□ -0.21
ATG4B-209ENST00000425239 TCRBV9S1A1TA0A576 114 aa13.75□□□□□ -0.21
ATG4B-209ENST00000425239 SLC35E2BP0CK96 405 aa13.75□□□□□ -0.21
ATG4B-209ENST00000425239 STMN1P16949 149 aa13.75□□□□□ -0.21
ATG4B-209ENST00000425239 ARFIP1P53367 373 aa13.75□□□□□ -0.21
ATG4B-209ENST00000425239 WNT3P56703 355 aa13.75□□□□□ -0.21
ATG4B-209ENST00000425239 GPX6P59796 221 aa13.75□□□□□ -0.21
ATG4B-209ENST00000425239 CRYZQ08257 329 aaKnown RBP13.75□□□□□ -0.21
ATG4B-209ENST00000425239 DUSP8Q13202 625 aa13.75□□□□□ -0.21
ATG4B-209ENST00000425239 DAZAP2Q15038 168 aaPredicted RBP13.75□□□□□ -0.21
ATG4B-209ENST00000425239 EBPQ15125 230 aaKnown RBP13.75□□□□□ -0.21
ATG4B-209ENST00000425239 MED27Q6P2C8 311 aa13.75□□□□□ -0.21
ATG4B-209ENST00000425239 LRRC70Q7Z2Q7 622 aa13.75□□□□□ -0.21
ATG4B-209ENST00000425239 WDR53Q7Z5U6 358 aaPredicted RBP13.75□□□□□ -0.21
ATG4B-209ENST00000425239 GPR180Q86V85 440 aa13.75□□□□□ -0.21
ATG4B-209ENST00000425239 CDC20BQ86Y33 519 aa13.75□□□□□ -0.21
ATG4B-209ENST00000425239 DND1Q8IYX4 353 aaKnown RBP13.75□□□□□ -0.21
ATG4B-209ENST00000425239 ST13P4Q8IZP2 240 aaPredicted RBP13.75□□□□□ -0.21
ATG4B-209ENST00000425239 ZCCHC7Q8N3Z6 543 aaKnown RBP13.75□□□□□ -0.21
ATG4B-209ENST00000425239 HUS1BQ8NHY5 278 aa13.75□□□□□ -0.21
ATG4B-209ENST00000425239 UBTD2Q8WUN7 234 aa13.75□□□□□ -0.21
ATG4B-209ENST00000425239 TSPAN17Q96FV3 270 aa13.75□□□□□ -0.21
ATG4B-209ENST00000425239 DGAT2Q96PD7 388 aa13.75□□□□□ -0.21
ATG4B-209ENST00000425239 CPNE1Q99829 537 aa13.75□□□□□ -0.21
ATG4B-209ENST00000425239 PHACTR1Q9C0D0 580 aa13.75□□□□□ -0.21
ATG4B-209ENST00000425239 WWTR1Q9GZV5 400 aa13.75□□□□□ -0.21
ATG4B-209ENST00000425239 CLEC4MQ9H2X3 399 aaPredicted RBP13.75□□□□□ -0.21
ATG4B-209ENST00000425239 KCNF1Q9H3M0 494 aa13.75□□□□□ -0.21
ATG4B-209ENST00000425239 GSX1Q9H4S2 264 aaPredicted RBP13.75□□□□□ -0.21
ATG4B-209ENST00000425239 MS4A12Q9NXJ0 267 aa13.75□□□□□ -0.21
ATG4B-209ENST00000425239 CBLCQ9ULV8 474 aa13.75□□□□□ -0.21
ATG4B-209ENST00000425239 A0A1W2PR48 441 aa13.74□□□□□ -0.21
ATG4B-209ENST00000425239 A0A1W2PS29 197 aa13.74□□□□□ -0.21
ATG4B-209ENST00000425239 A6NNC1 897 aa13.74□□□□□ -0.21
ATG4B-209ENST00000425239 HSPB2A8KAH6 182 aa13.74□□□□□ -0.21
ATG4B-209ENST00000425239 EFCAB8A8MWE9 144 aa13.74□□□□□ -0.21
ATG4B-209ENST00000425239 AHRRA9YTQ3 701 aa13.74□□□□□ -0.21
ATG4B-209ENST00000425239 FAM47E-STBD1D6RA91 191 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms