RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 NAT8LQ8N9F0 302 aa15.33■□□□□ 0.04
CHCHD3-202ENST00000423635 NTNG2Q96CW9 530 aa15.33■□□□□ 0.04
CHCHD3-202ENST00000423635 WDYHV1Q96HA8 205 aa15.33■□□□□ 0.04
CHCHD3-202ENST00000423635 TRIB1Q96RU8 372 aa15.33■□□□□ 0.04
CHCHD3-202ENST00000423635 DOHHQ9BU89 302 aa15.33■□□□□ 0.04
CHCHD3-202ENST00000423635 UBQLN3Q9H347 655 aa15.33■□□□□ 0.04
CHCHD3-202ENST00000423635 COPS7BQ9H9Q2 264 aaPredicted RBP15.33■□□□□ 0.04
CHCHD3-202ENST00000423635 ZNF490Q9ULM2 529 aaPredicted RBP15.33■□□□□ 0.04
CHCHD3-202ENST00000423635 SH3D21A4FU49 640 aa15.32■□□□□ 0.04
CHCHD3-202ENST00000423635 COX7A2P14406 83 aa15.32■□□□□ 0.04
CHCHD3-202ENST00000423635 GDF5P43026 501 aa15.32■□□□□ 0.04
CHCHD3-202ENST00000423635 TGM3Q08188 693 aa15.32■□□□□ 0.04
CHCHD3-202ENST00000423635 NTRK2Q16620 822 aa15.32■□□□□ 0.04
CHCHD3-202ENST00000423635 FAM45BPQ6NSW5 357 aa15.32■□□□□ 0.04
CHCHD3-202ENST00000423635 FAM13CQ8NE31 585 aa15.32■□□□□ 0.04
CHCHD3-202ENST00000423635 FAM45AQ8TCE6 357 aa15.32■□□□□ 0.04
CHCHD3-202ENST00000423635 MAPKAP1Q9BPZ7 522 aa15.32■□□□□ 0.04
CHCHD3-202ENST00000423635 RBM24Q9BX46 236 aaKnown RBP15.32■□□□□ 0.04
CHCHD3-202ENST00000423635 CAPS2Q9BXY5 557 aa15.32■□□□□ 0.04
CHCHD3-202ENST00000423635 ROGDIQ9GZN7 287 aa15.32■□□□□ 0.04
CHCHD3-202ENST00000423635 EHD1Q9H4M9 534 aa15.32■□□□□ 0.04
CHCHD3-202ENST00000423635 CORO1CQ9ULV4 474 aaPredicted RBP15.32■□□□□ 0.04
CHCHD3-202ENST00000423635 OARD1Q9Y530 152 aa15.32■□□□□ 0.04
CHCHD3-202ENST00000423635 CDC7O00311 574 aa15.31■□□□□ 0.04
CHCHD3-202ENST00000423635 CASKO14936 926 aa15.31■□□□□ 0.04
CHCHD3-202ENST00000423635 SMAD7O15105 426 aaKnown RBP15.31■□□□□ 0.04
CHCHD3-202ENST00000423635 TRAPPC6AO75865 159 aa15.31■□□□□ 0.04
CHCHD3-202ENST00000423635 WDR47O94967 919 aa15.31■□□□□ 0.04
CHCHD3-202ENST00000423635 ACSL3O95573 720 aa15.31■□□□□ 0.04
CHCHD3-202ENST00000423635 TTC4O95801 387 aa15.31■□□□□ 0.04
CHCHD3-202ENST00000423635 BMP7P18075 431 aa15.31■□□□□ 0.04
CHCHD3-202ENST00000423635 KCNC1P48547 511 aa15.31■□□□□ 0.04
CHCHD3-202ENST00000423635 CDK9P50750 372 aaKnown RBP15.31■□□□□ 0.04
CHCHD3-202ENST00000423635 ID2Q02363 134 aa15.31■□□□□ 0.04
CHCHD3-202ENST00000423635 TEDDM1Q5T9Z0 273 aa15.31■□□□□ 0.04
CHCHD3-202ENST00000423635 TTC27Q6P3X3 843 aa15.31■□□□□ 0.04
CHCHD3-202ENST00000423635 ZNF793Q6ZN11 406 aa15.31■□□□□ 0.04
CHCHD3-202ENST00000423635 UBE3DQ7Z6J8 389 aa15.31■□□□□ 0.04
CHCHD3-202ENST00000423635 YTHDF3Q7Z739 585 aaKnown RBP15.31■□□□□ 0.04
CHCHD3-202ENST00000423635 C9orf106Q8NAJ2 232 aa15.31■□□□□ 0.04
CHCHD3-202ENST00000423635 SRFBP1Q8NEF9 429 aaKnown RBP15.31■□□□□ 0.04
CHCHD3-202ENST00000423635 ZPLD1Q8TCW7 415 aa15.31■□□□□ 0.04
CHCHD3-202ENST00000423635 RBM18Q96H35 190 aaKnown RBP15.31■□□□□ 0.04
CHCHD3-202ENST00000423635 ART5Q96L15 291 aa15.31■□□□□ 0.04
CHCHD3-202ENST00000423635 ZNF597Q96LX8 424 aa15.31■□□□□ 0.04
CHCHD3-202ENST00000423635 DGAT2Q96PD7 388 aa15.31■□□□□ 0.04
CHCHD3-202ENST00000423635 KCNC2Q96PR1 638 aa15.31■□□□□ 0.04
CHCHD3-202ENST00000423635 F2RL3Q96RI0 385 aa15.31■□□□□ 0.04
CHCHD3-202ENST00000423635 TBCDQ9BTW9 1192 aa15.31■□□□□ 0.04
CHCHD3-202ENST00000423635 UGT2B28Q9BY64 529 aa15.31■□□□□ 0.04
CHCHD3-202ENST00000423635 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.31■□□□□ 0.04
CHCHD3-202ENST00000423635 GPRC5BQ9NZH0 403 aa15.31■□□□□ 0.04
CHCHD3-202ENST00000423635 CAMK2AQ9UQM7 478 aa15.31■□□□□ 0.04
CHCHD3-202ENST00000423635 EIF3LQ9Y262 564 aaKnown RBP15.31■□□□□ 0.04
CHCHD3-202ENST00000423635 DOCK7Q96N67 2140 aa15.31■□□□□ 0.04
CHCHD3-202ENST00000423635 ANK3Q12955 4377 aaKnown RBP15.3■□□□□ 0.04
CHCHD3-202ENST00000423635 HRKO00198 91 aa15.3■□□□□ 0.04
CHCHD3-202ENST00000423635 DYRK3O43781 588 aa15.3■□□□□ 0.04
CHCHD3-202ENST00000423635 FGF17O60258 216 aa15.3■□□□□ 0.04
CHCHD3-202ENST00000423635 ERN1O75460 977 aaKnown RBP15.3■□□□□ 0.04
CHCHD3-202ENST00000423635 SNX4O95219 450 aa15.3■□□□□ 0.04
CHCHD3-202ENST00000423635 TMIGD3P0DMS9 266 aaPredicted RBP15.3■□□□□ 0.04
CHCHD3-202ENST00000423635 ZNF37AP17032 561 aaPredicted RBP15.3■□□□□ 0.04
CHCHD3-202ENST00000423635 ATP5A1P25705 553 aaKnown RBP15.3■□□□□ 0.04
CHCHD3-202ENST00000423635 MSH2P43246 934 aa15.3■□□□□ 0.04
CHCHD3-202ENST00000423635 RPL21P46778 160 aaKnown RBP15.3■□□□□ 0.04
CHCHD3-202ENST00000423635 C18orf21Q32NC0 220 aaPredicted RBP15.3■□□□□ 0.04
CHCHD3-202ENST00000423635 SPANXN3Q5MJ09 141 aa15.3■□□□□ 0.04
CHCHD3-202ENST00000423635 FNDC7Q5VTL7 733 aa15.3■□□□□ 0.04
CHCHD3-202ENST00000423635 ADNP2Q6IQ32 1131 aa15.3■□□□□ 0.04
CHCHD3-202ENST00000423635 DGAT2L6Q6ZPD8 337 aa15.3■□□□□ 0.04
CHCHD3-202ENST00000423635 ACOT4Q8N9L9 421 aa15.3■□□□□ 0.04
CHCHD3-202ENST00000423635 BBOF1Q8ND07 529 aa15.3■□□□□ 0.04
CHCHD3-202ENST00000423635 RHBDF1Q96CC6 855 aa15.3■□□□□ 0.04
CHCHD3-202ENST00000423635 FBXL20Q96IG2 436 aa15.3■□□□□ 0.04
CHCHD3-202ENST00000423635 EGFL8Q99944 293 aa15.3■□□□□ 0.04
CHCHD3-202ENST00000423635 SFXN3Q9BWM7 321 aa15.3■□□□□ 0.04
CHCHD3-202ENST00000423635 GALNT8Q9NY28 637 aa15.3■□□□□ 0.04
CHCHD3-202ENST00000423635 FETUBQ9UGM5 382 aa15.3■□□□□ 0.04
CHCHD3-202ENST00000423635 TRPS1Q9UHF7 1281 aa15.3■□□□□ 0.04
CHCHD3-202ENST00000423635 SLC6A5Q9Y345 797 aa15.3■□□□□ 0.04
CHCHD3-202ENST00000423635 SPACA6W5XKT8 324 aa15.3■□□□□ 0.04
CHCHD3-202ENST00000423635 PRAMEF4O60810 478 aa15.29■□□□□ 0.04
CHCHD3-202ENST00000423635 SCELO95171 688 aa15.29■□□□□ 0.04
CHCHD3-202ENST00000423635 RCBTB2O95199 551 aa15.29■□□□□ 0.04
CHCHD3-202ENST00000423635 FOXF2Q12947 444 aa15.29■□□□□ 0.04
CHCHD3-202ENST00000423635 PRAMEF9Q5VWM5 478 aa15.29■□□□□ 0.04
CHCHD3-202ENST00000423635 OR4N5Q8IXE1 308 aa15.29■□□□□ 0.04
CHCHD3-202ENST00000423635 NKAPQ8N5F7 415 aaKnown RBP15.29■□□□□ 0.04
CHCHD3-202ENST00000423635 DIO2Q92813 273 aa15.29■□□□□ 0.04
CHCHD3-202ENST00000423635 ABTB1Q969K4 478 aaPredicted RBP15.29■□□□□ 0.04
CHCHD3-202ENST00000423635 PPWD1Q96BP3 646 aaKnown RBP15.29■□□□□ 0.04
CHCHD3-202ENST00000423635 WDR34Q96EX3 536 aa15.29■□□□□ 0.04
CHCHD3-202ENST00000423635 CERS2Q96G23 380 aa15.29■□□□□ 0.04
CHCHD3-202ENST00000423635 ZFP3Q96NJ6 502 aa15.29■□□□□ 0.04
CHCHD3-202ENST00000423635 ANGPTL4Q9BY76 406 aa15.29■□□□□ 0.04
CHCHD3-202ENST00000423635 NDRG3Q9UGV2 375 aa15.29■□□□□ 0.04
CHCHD3-202ENST00000423635 NPFFR2Q9Y5X5 522 aa15.29■□□□□ 0.04
CHCHD3-202ENST00000423635 IQANK1A0A1B0GTG1 560 aa15.28■□□□□ 0.04
CHCHD3-202ENST00000423635 TRIM64A6NGJ6 449 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms