RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 OR56A5P0C7T3 313 aa15.85■□□□□ 0.13
NPC1L1-203ENST00000423141 LRRC74AQ0VAA2 488 aa15.85■□□□□ 0.13
NPC1L1-203ENST00000423141 MRPL28Q13084 256 aaKnown RBP15.85■□□□□ 0.13
NPC1L1-203ENST00000423141 INSL4Q14641 139 aa15.85■□□□□ 0.13
NPC1L1-203ENST00000423141 SHFQ7M4L6 423 aa15.85■□□□□ 0.13
NPC1L1-203ENST00000423141 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.85■□□□□ 0.13
NPC1L1-203ENST00000423141 MMP21Q8N119 569 aa15.85■□□□□ 0.13
NPC1L1-203ENST00000423141 GOT1L1Q8NHS2 421 aaPredicted RBP15.85■□□□□ 0.13
NPC1L1-203ENST00000423141 TMEM43Q9BTV4 400 aa15.85■□□□□ 0.13
NPC1L1-203ENST00000423141 POLR2J3Q9H1A7 115 aaKnown RBP15.85■□□□□ 0.13
NPC1L1-203ENST00000423141 RETREG1Q9H6L5 497 aa15.85■□□□□ 0.13
NPC1L1-203ENST00000423141 EIF3KQ9UBQ5 218 aaKnown RBP15.85■□□□□ 0.13
NPC1L1-203ENST00000423141 DIMT1Q9UNQ2 313 aaKnown RBP15.85■□□□□ 0.13
NPC1L1-203ENST00000423141 SLC45A1Q9Y2W3 748 aa15.85■□□□□ 0.13
NPC1L1-203ENST00000423141 SF3B6Q9Y3B4 125 aaKnown RBP15.85■□□□□ 0.13
NPC1L1-203ENST00000423141 OR51B4Q9Y5P0 310 aa15.85■□□□□ 0.13
NPC1L1-203ENST00000423141 ZNF106Q9H2Y7 1883 aaKnown RBP15.85■□□□□ 0.13
NPC1L1-203ENST00000423141 CIB4A0PJX0 185 aa15.84■□□□□ 0.13
NPC1L1-203ENST00000423141 INMT-MINDY4F8WBC2 141 aa15.84■□□□□ 0.13
NPC1L1-203ENST00000423141 PSIP1O75475 530 aaKnown RBP15.84■□□□□ 0.13
NPC1L1-203ENST00000423141 ZNF250P15622 560 aa15.84■□□□□ 0.13
NPC1L1-203ENST00000423141 LSM11P83369 360 aaKnown RBP eCLIP15.84■□□□□ 0.13
NPC1L1-203ENST00000423141 GPR17Q13304 367 aa15.84■□□□□ 0.13
NPC1L1-203ENST00000423141 ELOAQ14241 798 aaKnown RBP15.84■□□□□ 0.13
NPC1L1-203ENST00000423141 ZNF630Q2M218 657 aaPredicted RBP15.84■□□□□ 0.13
NPC1L1-203ENST00000423141 PLK5Q496M5 336 aa15.84■□□□□ 0.13
NPC1L1-203ENST00000423141 SYT14P1Q58G82 188 aa15.84■□□□□ 0.13
NPC1L1-203ENST00000423141 TRIM40Q6P9F5 258 aa15.84■□□□□ 0.13
NPC1L1-203ENST00000423141 UNC5DQ6UXZ4 953 aa15.84■□□□□ 0.13
NPC1L1-203ENST00000423141 APOBEC4Q8WW27 367 aaKnown RBP15.84■□□□□ 0.13
NPC1L1-203ENST00000423141 LRR1Q96L50 414 aa15.84■□□□□ 0.13
NPC1L1-203ENST00000423141 BHLHE41Q9C0J9 482 aaPredicted RBP15.84■□□□□ 0.13
NPC1L1-203ENST00000423141 PPIL3Q9H2H8 161 aaKnown RBP15.84■□□□□ 0.13
NPC1L1-203ENST00000423141 REEP4Q9H6H4 257 aa15.84■□□□□ 0.13
NPC1L1-203ENST00000423141 SHISA3A0PJX4 238 aa15.84■□□□□ 0.13
NPC1L1-203ENST00000423141 TMEM202A6NGA9 273 aa15.84■□□□□ 0.13
NPC1L1-203ENST00000423141 H0YIV9 168 aa15.84■□□□□ 0.13
NPC1L1-203ENST00000423141 TMEM189-UBE2V1I3L0A0 370 aa15.84■□□□□ 0.13
NPC1L1-203ENST00000423141 CASKO14936 926 aa15.84■□□□□ 0.13
NPC1L1-203ENST00000423141 SYN3O14994 580 aa15.84■□□□□ 0.13
NPC1L1-203ENST00000423141 ORC5O43913 435 aa15.84■□□□□ 0.13
NPC1L1-203ENST00000423141 SLC43A1O75387 559 aa15.84■□□□□ 0.13
NPC1L1-203ENST00000423141 RAB36O95755 333 aa15.84■□□□□ 0.13
NPC1L1-203ENST00000423141 TP53P04637 393 aaPredicted RBP15.84■□□□□ 0.13
NPC1L1-203ENST00000423141 ARAFP10398 606 aa15.84■□□□□ 0.13
NPC1L1-203ENST00000423141 POLR2CP19387 275 aaPredicted RBP15.84■□□□□ 0.13
NPC1L1-203ENST00000423141 SOX18P35713 384 aa15.84■□□□□ 0.13
NPC1L1-203ENST00000423141 PTPN5P54829 565 aa15.84■□□□□ 0.13
NPC1L1-203ENST00000423141 WDR5P61964 334 aaKnown RBP15.84■□□□□ 0.13
NPC1L1-203ENST00000423141 PPP3R1P63098 170 aa15.84■□□□□ 0.13
NPC1L1-203ENST00000423141 RTP2Q5QGT7 225 aa15.84■□□□□ 0.13
NPC1L1-203ENST00000423141 HECTD3Q5T447 861 aa15.84■□□□□ 0.13
NPC1L1-203ENST00000423141 ANKRD54Q6NXT1 300 aa15.84■□□□□ 0.13
NPC1L1-203ENST00000423141 PGBD2Q6P3X8 592 aa15.84■□□□□ 0.13
NPC1L1-203ENST00000423141 DEF8Q6ZN54 512 aa15.84■□□□□ 0.13
NPC1L1-203ENST00000423141 QSOX2Q6ZRP7 698 aa15.84■□□□□ 0.13
NPC1L1-203ENST00000423141 OR8H3Q8N146 312 aa15.84■□□□□ 0.13
NPC1L1-203ENST00000423141 LMNTD1Q8N9Z9 388 aa15.84■□□□□ 0.13
NPC1L1-203ENST00000423141 GPR32P1Q8NGA4 272 aa15.84■□□□□ 0.13
NPC1L1-203ENST00000423141 LRRC20Q8TCA0 184 aa15.84■□□□□ 0.13
NPC1L1-203ENST00000423141 AP3S1Q92572 193 aa15.84■□□□□ 0.13
NPC1L1-203ENST00000423141 AKAP1Q92667 903 aaKnown RBP eCLIP15.84■□□□□ 0.13
NPC1L1-203ENST00000423141 PAK6Q9NQU5 681 aaPredicted RBP15.84■□□□□ 0.13
NPC1L1-203ENST00000423141 PCDH10Q9P2E7 1040 aa15.84■□□□□ 0.13
NPC1L1-203ENST00000423141 ARHGEF33A8MVX0 844 aa15.83■□□□□ 0.13
NPC1L1-203ENST00000423141 BNIP3LO60238 219 aa15.83■□□□□ 0.13
NPC1L1-203ENST00000423141 SLC22A5O76082 557 aa15.83■□□□□ 0.13
NPC1L1-203ENST00000423141 IFNA14P01570 189 aa15.83■□□□□ 0.13
NPC1L1-203ENST00000423141 LHCGRP22888 699 aa15.83■□□□□ 0.13
NPC1L1-203ENST00000423141 CSNK1DP48730 415 aa15.83■□□□□ 0.13
NPC1L1-203ENST00000423141 GRHL2Q6ISB3 625 aa15.83■□□□□ 0.13
NPC1L1-203ENST00000423141 TCTN3Q6NUS6 607 aa15.83■□□□□ 0.13
NPC1L1-203ENST00000423141 DNAJC5GQ8N7S2 189 aa15.83■□□□□ 0.13
NPC1L1-203ENST00000423141 DTX3Q8N9I9 347 aa15.83■□□□□ 0.13
NPC1L1-203ENST00000423141 ASIC4Q96FT7 647 aa15.83■□□□□ 0.13
NPC1L1-203ENST00000423141 PARK7Q99497 189 aaKnown RBP15.83■□□□□ 0.13
NPC1L1-203ENST00000423141 KCNJ15Q99712 375 aa15.83■□□□□ 0.13
NPC1L1-203ENST00000423141 ATF6BQ99941 703 aa15.83■□□□□ 0.13
NPC1L1-203ENST00000423141 MED18Q9BUE0 208 aa15.83■□□□□ 0.13
NPC1L1-203ENST00000423141 TESQ9UGI8 421 aaKnown RBP15.83■□□□□ 0.13
NPC1L1-203ENST00000423141 ANGPT4Q9Y264 503 aa15.83■□□□□ 0.13
NPC1L1-203ENST00000423141 Q9Y3F1 56 aa15.83■□□□□ 0.13
NPC1L1-203ENST00000423141 CDH10Q9Y6N8 788 aa15.83■□□□□ 0.13
NPC1L1-203ENST00000423141 OR6C75A6NL08 312 aa15.83■□□□□ 0.12
NPC1L1-203ENST00000423141 BTN3A3O00478 584 aa15.83■□□□□ 0.12
NPC1L1-203ENST00000423141 UGDHO60701 494 aa15.83■□□□□ 0.12
NPC1L1-203ENST00000423141 PDGFAP04085 211 aa15.83■□□□□ 0.12
NPC1L1-203ENST00000423141 AP1S2P56377 157 aa15.83■□□□□ 0.12
NPC1L1-203ENST00000423141 PER3P56645 1201 aa15.83■□□□□ 0.12
NPC1L1-203ENST00000423141 WNT4P56705 351 aa15.83■□□□□ 0.12
NPC1L1-203ENST00000423141 PTSQ03393 145 aa15.83■□□□□ 0.12
NPC1L1-203ENST00000423141 FCN2Q15485 313 aa15.83■□□□□ 0.12
NPC1L1-203ENST00000423141 DCST1Q5T197 706 aa15.83■□□□□ 0.12
NPC1L1-203ENST00000423141 RNLSQ5VYX0 342 aa15.83■□□□□ 0.12
NPC1L1-203ENST00000423141 ZNF57Q68EA5 555 aaPredicted RBP15.83■□□□□ 0.12
NPC1L1-203ENST00000423141 GRAMD2AQ8IUY3 354 aa15.83■□□□□ 0.12
NPC1L1-203ENST00000423141 CBARPQ8N350 705 aaPredicted RBP15.83■□□□□ 0.12
NPC1L1-203ENST00000423141 TRPV1Q8NER1 839 aa15.83■□□□□ 0.12
NPC1L1-203ENST00000423141 OR4D11Q8NGI4 311 aa15.83■□□□□ 0.12
NPC1L1-203ENST00000423141 WDR48Q8TAF3 677 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms