RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 PITHD1Q9GZP4 211 aaPredicted RBP16.75■□□□□ 0.27
VCP-202ENST00000417448 REXO4Q9GZR2 422 aaKnown RBP16.75■□□□□ 0.27
VCP-202ENST00000417448 TNFRSF12AQ9NP84 129 aa16.75■□□□□ 0.27
VCP-202ENST00000417448 DMRT3Q9NQL9 472 aa16.75■□□□□ 0.27
VCP-202ENST00000417448 C14orf105Q9NVL8 296 aa16.75■□□□□ 0.27
VCP-202ENST00000417448 OXSMQ9NWU1 459 aa16.75■□□□□ 0.27
VCP-202ENST00000417448 MKS1Q9NXB0 559 aa16.75■□□□□ 0.27
VCP-202ENST00000417448 TIMM22Q9Y584 194 aa16.75■□□□□ 0.27
VCP-202ENST00000417448 PHF3Q92576 2039 aaKnown RBP16.75■□□□□ 0.27
VCP-202ENST00000417448 CSPG4Q6UVK1 2322 aa16.75■□□□□ 0.27
VCP-202ENST00000417448 WDR91A4D1P6 747 aa16.74■□□□□ 0.27
VCP-202ENST00000417448 H0YIG0 161 aa16.74■□□□□ 0.27
VCP-202ENST00000417448 H0YIV9 168 aa16.74■□□□□ 0.27
VCP-202ENST00000417448 B4GALT2O60909 372 aa16.74■□□□□ 0.27
VCP-202ENST00000417448 SEC24DO94855 1032 aaPredicted RBP16.74■□□□□ 0.27
VCP-202ENST00000417448 HOXD4P09016 255 aaPredicted RBP16.74■□□□□ 0.27
VCP-202ENST00000417448 CERS1P27544 350 aa16.74■□□□□ 0.27
VCP-202ENST00000417448 TNFAIP8L3Q5GJ75 292 aa16.74■□□□□ 0.27
VCP-202ENST00000417448 CES4AQ5XG92 561 aa16.74■□□□□ 0.27
VCP-202ENST00000417448 ABHD17CQ6PCB6 329 aa16.74■□□□□ 0.27
VCP-202ENST00000417448 ZNF793Q6ZN11 406 aa16.74■□□□□ 0.27
VCP-202ENST00000417448 ZCCHC23Q6ZST2 131 aa16.74■□□□□ 0.27
VCP-202ENST00000417448 LANCL3Q6ZV70 420 aa16.74■□□□□ 0.27
VCP-202ENST00000417448 CRLF3Q8IUI8 442 aa16.74■□□□□ 0.27
VCP-202ENST00000417448 OR2L5Q8NG80 312 aa16.74■□□□□ 0.27
VCP-202ENST00000417448 LILRB4Q8NHJ6 448 aa16.74■□□□□ 0.27
VCP-202ENST00000417448 WDR20Q8TBZ3 569 aa16.74■□□□□ 0.27
VCP-202ENST00000417448 NANOS1Q8WY41 292 aaKnown RBP16.74■□□□□ 0.27
VCP-202ENST00000417448 UBE2E3Q969T4 207 aa16.74■□□□□ 0.27
VCP-202ENST00000417448 GAL3ST3Q96A11 431 aa16.74■□□□□ 0.27
VCP-202ENST00000417448 FAR2Q96K12 515 aa16.74■□□□□ 0.27
VCP-202ENST00000417448 PKNOX2Q96KN3 472 aa16.74■□□□□ 0.27
VCP-202ENST00000417448 KCNK9Q9NPC2 374 aa16.74■□□□□ 0.27
VCP-202ENST00000417448 MKKSQ9NPJ1 570 aaPredicted RBP16.74■□□□□ 0.27
VCP-202ENST00000417448 PRDM7Q9NQW5 492 aa16.74■□□□□ 0.27
VCP-202ENST00000417448 ST6GALNAC2Q9UJ37 374 aa16.74■□□□□ 0.27
VCP-202ENST00000417448 MKL2Q9ULH7 1088 aa16.74■□□□□ 0.27
VCP-202ENST00000417448 RNF6Q9Y252 685 aa16.74■□□□□ 0.27
VCP-202ENST00000417448 PCDHGA11Q9Y5H2 935 aa16.74■□□□□ 0.27
VCP-202ENST00000417448 RTTNQ86VV8 2226 aa16.74■□□□□ 0.27
VCP-202ENST00000417448 MYOCOSA0A1B0GUC4 107 aa16.73■□□□□ 0.27
VCP-202ENST00000417448 URADA6NGE7 173 aa16.73■□□□□ 0.27
VCP-202ENST00000417448 PRPF4O43172 522 aaKnown RBP eCLIP16.73■□□□□ 0.27
VCP-202ENST00000417448 ZWINTO95229 277 aa16.73■□□□□ 0.27
VCP-202ENST00000417448 OTCP00480 354 aa16.73■□□□□ 0.27
VCP-202ENST00000417448 PDYNP01213 254 aa16.73■□□□□ 0.27
VCP-202ENST00000417448 C8orf89P0DMQ9 161 aa16.73■□□□□ 0.27
VCP-202ENST00000417448 H2AFXP16104 143 aaPredicted RBP16.73■□□□□ 0.27
VCP-202ENST00000417448 SERPINB3P29508 390 aa16.73■□□□□ 0.27
VCP-202ENST00000417448 PTGER1P34995 402 aa16.73■□□□□ 0.27
VCP-202ENST00000417448 HTR6P50406 440 aa16.73■□□□□ 0.27
VCP-202ENST00000417448 FOXA1P55317 472 aa16.73■□□□□ 0.27
VCP-202ENST00000417448 ADAM8P78325 824 aa16.73■□□□□ 0.27
VCP-202ENST00000417448 BTBD16Q32M84 506 aa16.73■□□□□ 0.27
VCP-202ENST00000417448 ADPRMQ3LIE5 342 aa16.73■□□□□ 0.27
VCP-202ENST00000417448 MINDY4Q4G0A6 757 aa16.73■□□□□ 0.27
VCP-202ENST00000417448 CFAP157Q5JU67 520 aa16.73■□□□□ 0.27
VCP-202ENST00000417448 GPRIN3Q6ZVF9 776 aa16.73■□□□□ 0.27
VCP-202ENST00000417448 CD163Q86VB7 1156 aa16.73■□□□□ 0.27
VCP-202ENST00000417448 CNPY4Q8N129 248 aa16.73■□□□□ 0.27
VCP-202ENST00000417448 CA13Q8N1Q1 262 aa16.73■□□□□ 0.27
VCP-202ENST00000417448 RPRMLQ8N4K4 120 aa16.73■□□□□ 0.27
VCP-202ENST00000417448 RDH11Q8TC12 318 aa16.73■□□□□ 0.27
VCP-202ENST00000417448 ARL8AQ96BM9 186 aa16.73■□□□□ 0.27
VCP-202ENST00000417448 CMTM7Q96FZ5 175 aa16.73■□□□□ 0.27
VCP-202ENST00000417448 ZNF354BQ96LW1 612 aa16.73■□□□□ 0.27
VCP-202ENST00000417448 UTP23Q9BRU9 249 aaKnown RBP16.73■□□□□ 0.27
VCP-202ENST00000417448 TMBIM4Q9HC24 238 aa16.73■□□□□ 0.27
VCP-202ENST00000417448 MID1IP1Q9NPA3 183 aa16.73■□□□□ 0.27
VCP-202ENST00000417448 DNAJC13O75165 2243 aa16.73■□□□□ 0.27
VCP-202ENST00000417448 COL6A5A8TX70 2615 aa16.72■□□□□ 0.27
VCP-202ENST00000417448 UGDHO60701 494 aa16.72■□□□□ 0.27
VCP-202ENST00000417448 NEURL1O76050 574 aa16.72■□□□□ 0.27
VCP-202ENST00000417448 MYZAPP0CAP1 466 aa16.72■□□□□ 0.27
VCP-202ENST00000417448 CD46P15529 392 aa16.72■□□□□ 0.27
VCP-202ENST00000417448 CHN1P15882 459 aa16.72■□□□□ 0.27
VCP-202ENST00000417448 HNRNPFP52597 415 aaKnown RBP16.72■□□□□ 0.27
VCP-202ENST00000417448 DNAJB13P59910 316 aa16.72■□□□□ 0.27
VCP-202ENST00000417448 BTG2P78543 158 aa16.72■□□□□ 0.27
VCP-202ENST00000417448 MYBPHQ13203 477 aa16.72■□□□□ 0.27
VCP-202ENST00000417448 DEPDC1Q5TB30 811 aa16.72■□□□□ 0.27
VCP-202ENST00000417448 KHDRBS2Q5VWX1 349 aaKnown RBP16.72■□□□□ 0.27
VCP-202ENST00000417448 LIPMQ5VYY2 423 aa16.72■□□□□ 0.27
VCP-202ENST00000417448 FRG2Q64ET8 278 aa16.72■□□□□ 0.27
VCP-202ENST00000417448 PLAG1Q6DJT9 500 aa16.72■□□□□ 0.27
VCP-202ENST00000417448 TRIM40Q6P9F5 258 aa16.72■□□□□ 0.27
VCP-202ENST00000417448 EID3Q8N140 333 aa16.72■□□□□ 0.27
VCP-202ENST00000417448 CPSF7Q8N684 471 aaKnown RBP16.72■□□□□ 0.27
VCP-202ENST00000417448 TMEM178AQ8NBL3 297 aa16.72■□□□□ 0.27
VCP-202ENST00000417448 TMEM52Q8NDY8 209 aa16.72■□□□□ 0.27
VCP-202ENST00000417448 ASB5Q8WWX0 329 aa16.72■□□□□ 0.27
VCP-202ENST00000417448 CCDC126Q96EE4 140 aa16.72■□□□□ 0.27
VCP-202ENST00000417448 PGM2Q96G03 612 aa16.72■□□□□ 0.27
VCP-202ENST00000417448 FRG2BQ96QU4 278 aa16.72■□□□□ 0.27
VCP-202ENST00000417448 ZNF382Q96SR6 550 aa16.72■□□□□ 0.27
VCP-202ENST00000417448 VN1R1Q9GZP7 353 aa16.72■□□□□ 0.27
VCP-202ENST00000417448 DNAJB12Q9NXW2 375 aaKnown RBP16.72■□□□□ 0.27
VCP-202ENST00000417448 MANBAO00462 879 aa16.71■□□□□ 0.27
VCP-202ENST00000417448 PLPP1O14494 284 aa16.71■□□□□ 0.27
VCP-202ENST00000417448 TRIM13O60858 407 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms