RNA–Protein interactions for RNA: ENST00000415380.6

SCARB1-203, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2 BASIC

Gene SCARB1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-203ENST00000415380 ABCG4Q9H172 646 aa17.1■□□□□ 0.33
SCARB1-203ENST00000415380 MMP28Q9H239 520 aa17.1■□□□□ 0.33
SCARB1-203ENST00000415380 TFECO14948 347 aaPredicted RBP17.09■□□□□ 0.33
SCARB1-203ENST00000415380 MYL12BO14950 172 aa17.09■□□□□ 0.33
SCARB1-203ENST00000415380 TP53P04637 393 aaPredicted RBP17.09■□□□□ 0.33
SCARB1-203ENST00000415380 MMP12P39900 470 aa17.09■□□□□ 0.33
SCARB1-203ENST00000415380 GSTM5P46439 218 aa17.09■□□□□ 0.33
SCARB1-203ENST00000415380 MRPS15P82914 257 aaKnown RBP17.09■□□□□ 0.33
SCARB1-203ENST00000415380 TARDBPQ13148 414 aaKnown RBP eCLIP17.09■□□□□ 0.332e-6■■■■■ 38.5
SCARB1-203ENST00000415380 C1DQ13901 141 aaKnown RBP17.09■□□□□ 0.33
SCARB1-203ENST00000415380 OCLNQ16625 522 aa17.09■□□□□ 0.33
SCARB1-203ENST00000415380 TBRG1Q3YBR2 411 aa17.09■□□□□ 0.33
SCARB1-203ENST00000415380 TRIM60Q495X7 471 aa17.09■□□□□ 0.33
SCARB1-203ENST00000415380 DDX53Q86TM3 631 aaKnown RBP17.09■□□□□ 0.33
SCARB1-203ENST00000415380 SLC9B2Q86UD5 537 aa17.09■□□□□ 0.33
SCARB1-203ENST00000415380 ADGRF3Q8IZF5 1079 aa17.09■□□□□ 0.33
SCARB1-203ENST00000415380 OR9Q1Q8NGQ5 310 aa17.09■□□□□ 0.33
SCARB1-203ENST00000415380 CD99L2Q8TCZ2 262 aa17.09■□□□□ 0.33
SCARB1-203ENST00000415380 SLC25A46Q96AG3 418 aa17.09■□□□□ 0.33
SCARB1-203ENST00000415380 ABCB9Q9NP78 766 aa17.09■□□□□ 0.33
SCARB1-203ENST00000415380 SEMA3GQ9NS98 782 aa17.09■□□□□ 0.33
SCARB1-203ENST00000415380 TVP23BQ9NYZ1 205 aa17.09■□□□□ 0.33
SCARB1-203ENST00000415380 IL36AQ9UHA7 158 aa17.09■□□□□ 0.33
SCARB1-203ENST00000415380 CENPXA8MT69 81 aa17.09■□□□□ 0.33
SCARB1-203ENST00000415380 TYRP14679 529 aa17.09■□□□□ 0.33
SCARB1-203ENST00000415380 TNNI3P19429 210 aa17.09■□□□□ 0.33
SCARB1-203ENST00000415380 HYAL2Q12891 473 aa17.09■□□□□ 0.33
SCARB1-203ENST00000415380 GLYR1Q49A26 553 aaPredicted RBP17.09■□□□□ 0.33
SCARB1-203ENST00000415380 ZNF805Q5CZA5 627 aa17.09■□□□□ 0.33
SCARB1-203ENST00000415380 FAM131AQ6UXB0 335 aa17.09■□□□□ 0.33
SCARB1-203ENST00000415380 TMIGD1Q6UXZ0 262 aa17.09■□□□□ 0.33
SCARB1-203ENST00000415380 FAM181AQ8N9Y4 354 aa17.09■□□□□ 0.33
SCARB1-203ENST00000415380 ZNF689Q96CS4 500 aaPredicted RBP17.09■□□□□ 0.33
SCARB1-203ENST00000415380 MRGPRX3Q96LB0 322 aa17.09■□□□□ 0.33
SCARB1-203ENST00000415380 ZNF354BQ96LW1 612 aa17.09■□□□□ 0.33
SCARB1-203ENST00000415380 MIXL1Q9H2W2 232 aa17.09■□□□□ 0.33
SCARB1-203ENST00000415380 TXNL4BQ9NX01 149 aaKnown RBP17.09■□□□□ 0.33
SCARB1-203ENST00000415380 CCDC88CQ9P219 2028 aa17.09■□□□□ 0.33
SCARB1-203ENST00000415380 PRKYO43930 277 aa17.08■□□□□ 0.33
SCARB1-203ENST00000415380 B4GALT2O60909 372 aa17.08■□□□□ 0.33
SCARB1-203ENST00000415380 LILRB5O75023 590 aa17.08■□□□□ 0.33
SCARB1-203ENST00000415380 CLEC2LP0C7M8 214 aa17.08■□□□□ 0.33
SCARB1-203ENST00000415380 DDCP20711 480 aa17.08■□□□□ 0.33
SCARB1-203ENST00000415380 MANFP55145 182 aaKnown RBP17.08■□□□□ 0.33
SCARB1-203ENST00000415380 SCN1BQ07699 218 aa17.08■□□□□ 0.33
SCARB1-203ENST00000415380 SLAMF1Q13291 335 aa17.08■□□□□ 0.33
SCARB1-203ENST00000415380 TRAPPC5Q8IUR0 188 aa17.08■□□□□ 0.33
SCARB1-203ENST00000415380 C2orf73Q8N5S3 287 aaPredicted RBP17.08■□□□□ 0.33
SCARB1-203ENST00000415380 SLC7A13Q8TCU3 470 aa17.08■□□□□ 0.33
SCARB1-203ENST00000415380 OR5P2Q8WZ92 322 aa17.08■□□□□ 0.33
SCARB1-203ENST00000415380 IL17FQ96PD4 163 aa17.08■□□□□ 0.33
SCARB1-203ENST00000415380 FUZQ9BT04 418 aa17.08■□□□□ 0.33
SCARB1-203ENST00000415380 MVB12BQ9H7P6 319 aa17.08■□□□□ 0.33
SCARB1-203ENST00000415380 HCN2Q9UL51 889 aa17.08■□□□□ 0.33
SCARB1-203ENST00000415380 ABT1Q9ULW3 272 aaKnown RBP17.08■□□□□ 0.33
SCARB1-203ENST00000415380 MAFFQ9ULX9 164 aa17.08■□□□□ 0.33
SCARB1-203ENST00000415380 ANKRD34BA5PLL1 514 aa17.08■□□□□ 0.32
SCARB1-203ENST00000415380 HMX3A6NHT5 357 aa17.08■□□□□ 0.32
SCARB1-203ENST00000415380 RTCAO00442 366 aaKnown RBP17.08■□□□□ 0.32
SCARB1-203ENST00000415380 PLPP1O14494 284 aa17.08■□□□□ 0.32
SCARB1-203ENST00000415380 TLX2O43763 284 aaPredicted RBP17.08■□□□□ 0.32
SCARB1-203ENST00000415380 SH3BP5O60239 455 aa17.08■□□□□ 0.32
SCARB1-203ENST00000415380 MSL3P1P0C860 447 aa17.08■□□□□ 0.32
SCARB1-203ENST00000415380 CCR2P41597 374 aa17.08■□□□□ 0.32
SCARB1-203ENST00000415380 KCNJ5P48544 419 aa17.08■□□□□ 0.32
SCARB1-203ENST00000415380 RACK1P63244 317 aaKnown RBP17.08■□□□□ 0.32
SCARB1-203ENST00000415380 HNRNPA0Q13151 305 aaKnown RBP17.08■□□□□ 0.32
SCARB1-203ENST00000415380 PRR23CQ6ZRP0 262 aa17.08■□□□□ 0.32
SCARB1-203ENST00000415380 USP30Q70CQ3 517 aa17.08■□□□□ 0.32
SCARB1-203ENST00000415380 TRMT11Q7Z4G4 463 aaKnown RBP17.08■□□□□ 0.32
SCARB1-203ENST00000415380 C6orf120Q7Z4R8 191 aa17.08■□□□□ 0.32
SCARB1-203ENST00000415380 ASCC1Q8N9N2 400 aaKnown RBP17.08■□□□□ 0.32
SCARB1-203ENST00000415380 VN1R2Q8NFZ6 395 aa17.08■□□□□ 0.32
SCARB1-203ENST00000415380 OR52I1Q8NGK6 324 aa17.08■□□□□ 0.32
SCARB1-203ENST00000415380 IRF7Q92985 503 aa17.08■□□□□ 0.32
SCARB1-203ENST00000415380 TEFMQ96QE5 360 aaKnown RBP17.08■□□□□ 0.32
SCARB1-203ENST00000415380 OR2AG1Q9H205 316 aa17.08■□□□□ 0.32
SCARB1-203ENST00000415380 KLHL20Q9Y2M5 609 aa17.08■□□□□ 0.32
SCARB1-203ENST00000415380 ANHXE9PGG2 379 aa17.07■□□□□ 0.32
SCARB1-203ENST00000415380 HMGN4O00479 90 aa17.07■□□□□ 0.32
SCARB1-203ENST00000415380 CXCR2P25025 360 aa17.07■□□□□ 0.32
SCARB1-203ENST00000415380 DAB2P98082 770 aa17.07■□□□□ 0.32
SCARB1-203ENST00000415380 HSPB3Q12988 150 aa17.07■□□□□ 0.32
SCARB1-203ENST00000415380 CDK10Q15131 360 aa17.07■□□□□ 0.32
SCARB1-203ENST00000415380 FLYWCH1Q4VC44 716 aa17.07■□□□□ 0.32
SCARB1-203ENST00000415380 IL17RCQ8NAC3 791 aa17.07■□□□□ 0.32
SCARB1-203ENST00000415380 CREB3L4Q8TEY5 395 aa17.07■□□□□ 0.32
SCARB1-203ENST00000415380 TMEM203Q969S6 136 aa17.07■□□□□ 0.32
SCARB1-203ENST00000415380 UBE2E3Q969T4 207 aa17.07■□□□□ 0.32
SCARB1-203ENST00000415380 NELL2Q99435 816 aa17.07■□□□□ 0.32
SCARB1-203ENST00000415380 LINC00597Q9H2U6 94 aa17.07■□□□□ 0.32
SCARB1-203ENST00000415380 EPHX3Q9H6B9 360 aa17.07■□□□□ 0.32
SCARB1-203ENST00000415380 C5AR2Q9P296 337 aa17.07■□□□□ 0.32
SCARB1-203ENST00000415380 PLEKHB1Q9UF11 243 aaPredicted RBP17.07■□□□□ 0.32
SCARB1-203ENST00000415380 PDE9AO76083 593 aa17.07■□□□□ 0.32
SCARB1-203ENST00000415380 TBX6O95947 436 aaPredicted RBP17.07■□□□□ 0.32
SCARB1-203ENST00000415380 IL1AP01583 271 aa17.07■□□□□ 0.32
SCARB1-203ENST00000415380 CHRM5P08912 532 aaPredicted RBP17.07■□□□□ 0.32
SCARB1-203ENST00000415380 ETV5P41161 510 aa17.07■□□□□ 0.32
SCARB1-203ENST00000415380 RPS5P46782 204 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms