RNA–Protein interactions for RNA: ENST00000415164.5

UBXN4-202, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-202ENST00000415164 LRRC70Q7Z2Q7 622 aa17.79■□□□□ 0.44
UBXN4-202ENST00000415164 FBXW8Q8N3Y1 598 aa17.79■□□□□ 0.44
UBXN4-202ENST00000415164 OR10G3Q8NGC4 313 aa17.79■□□□□ 0.44
UBXN4-202ENST00000415164 PAQR8Q8TEZ7 354 aa17.79■□□□□ 0.44
UBXN4-202ENST00000415164 CDKL2Q92772 493 aa17.79■□□□□ 0.44
UBXN4-202ENST00000415164 WDR34Q96EX3 536 aa17.79■□□□□ 0.44
UBXN4-202ENST00000415164 LRRC46Q96FV0 321 aa17.79■□□□□ 0.44
UBXN4-202ENST00000415164 CMTM7Q96FZ5 175 aa17.79■□□□□ 0.44
UBXN4-202ENST00000415164 DOHHQ9BU89 302 aa17.79■□□□□ 0.44
UBXN4-202ENST00000415164 ERVK-6Q9BXR3 956 aa17.79■□□□□ 0.44
UBXN4-202ENST00000415164 ALG9Q9H6U8 611 aa17.79■□□□□ 0.44
UBXN4-202ENST00000415164 RPF2Q9H7B2 306 aaKnown RBP17.79■□□□□ 0.44
UBXN4-202ENST00000415164 IGSF5Q9NSI5 407 aa17.79■□□□□ 0.44
UBXN4-202ENST00000415164 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.79■□□□□ 0.44
UBXN4-202ENST00000415164 ERVK-19Q9WJR5 959 aa17.79■□□□□ 0.44
UBXN4-202ENST00000415164 SNX24Q9Y343 169 aa17.79■□□□□ 0.44
UBXN4-202ENST00000415164 CXorf49A8MYA2 514 aaPredicted RBP17.78■□□□□ 0.44
UBXN4-202ENST00000415164 DVL2O14641 736 aa17.78■□□□□ 0.44
UBXN4-202ENST00000415164 ZSCAN12O43309 604 aa17.78■□□□□ 0.44
UBXN4-202ENST00000415164 TRAPPC6AO75865 159 aa17.78■□□□□ 0.44
UBXN4-202ENST00000415164 ALOX15P16050 662 aaPredicted RBP17.78■□□□□ 0.44
UBXN4-202ENST00000415164 EPORP19235 508 aa17.78■□□□□ 0.44
UBXN4-202ENST00000415164 KHDRBS2Q5VWX1 349 aaKnown RBP17.78■□□□□ 0.44
UBXN4-202ENST00000415164 OR4C11Q6IEV9 310 aa17.78■□□□□ 0.44
UBXN4-202ENST00000415164 RNF111Q6ZNA4 994 aa17.78■□□□□ 0.44
UBXN4-202ENST00000415164 RAPH1Q70E73 1250 aa17.78■□□□□ 0.44
UBXN4-202ENST00000415164 PDPRQ8NCN5 879 aa17.78■□□□□ 0.44
UBXN4-202ENST00000415164 NEIL3Q8TAT5 605 aa17.78■□□□□ 0.44
UBXN4-202ENST00000415164 PYROXD1Q8WU10 500 aa17.78■□□□□ 0.44
UBXN4-202ENST00000415164 CENPKQ9BS16 269 aa17.78■□□□□ 0.44
UBXN4-202ENST00000415164 CD244Q9BZW8 370 aa17.78■□□□□ 0.44
UBXN4-202ENST00000415164 RASSF1Q9NS23 344 aa17.78■□□□□ 0.44
UBXN4-202ENST00000415164 PTBP2Q9UKA9 531 aaKnown RBP17.78■□□□□ 0.44
UBXN4-202ENST00000415164 EDARQ9UNE0 448 aa17.78■□□□□ 0.44
UBXN4-202ENST00000415164 ITPR3Q14573 2671 aa17.78■□□□□ 0.44
UBXN4-202ENST00000415164 LRRC3CA6NJW4 275 aa17.77■□□□□ 0.44
UBXN4-202ENST00000415164 SERPINB3P29508 390 aa17.77■□□□□ 0.44
UBXN4-202ENST00000415164 SSTR1P30872 391 aa17.77■□□□□ 0.44
UBXN4-202ENST00000415164 TLX1P31314 330 aaPredicted RBP17.77■□□□□ 0.44
UBXN4-202ENST00000415164 MRPS25P82663 173 aaKnown RBP17.77■□□□□ 0.44
UBXN4-202ENST00000415164 FOXD4Q12950 439 aaPredicted RBP17.77■□□□□ 0.44
UBXN4-202ENST00000415164 SLMAPQ14BN4 828 aa17.77■□□□□ 0.44
UBXN4-202ENST00000415164 TOMM20Q15388 145 aa17.77■□□□□ 0.44
UBXN4-202ENST00000415164 TBCCQ15814 346 aa17.77■□□□□ 0.44
UBXN4-202ENST00000415164 CDKL4Q5MAI5 379 aa17.77■□□□□ 0.44
UBXN4-202ENST00000415164 ADGRD1Q6QNK2 874 aa17.77■□□□□ 0.44
UBXN4-202ENST00000415164 GPR180Q86V85 440 aa17.77■□□□□ 0.44
UBXN4-202ENST00000415164 CDC20BQ86Y33 519 aa17.77■□□□□ 0.44
UBXN4-202ENST00000415164 CTAGE3PQ8IX95 158 aa17.77■□□□□ 0.44
UBXN4-202ENST00000415164 RELL2Q8NC24 303 aaPredicted RBP17.77■□□□□ 0.44
UBXN4-202ENST00000415164 BBOF1Q8ND07 529 aa17.77■□□□□ 0.44
UBXN4-202ENST00000415164 TNIP2Q8NFZ5 429 aa17.77■□□□□ 0.44
UBXN4-202ENST00000415164 DIO2Q92813 273 aa17.77■□□□□ 0.44
UBXN4-202ENST00000415164 RGMAQ96B86 450 aa17.77■□□□□ 0.44
UBXN4-202ENST00000415164 FBXL20Q96IG2 436 aa17.77■□□□□ 0.44
UBXN4-202ENST00000415164 CXXC4Q9H2H0 198 aa17.77■□□□□ 0.44
UBXN4-202ENST00000415164 SAYSD1Q9NPB0 183 aa17.77■□□□□ 0.44
UBXN4-202ENST00000415164 DMRT3Q9NQL9 472 aa17.77■□□□□ 0.44
UBXN4-202ENST00000415164 MS4A12Q9NXJ0 267 aa17.77■□□□□ 0.44
UBXN4-202ENST00000415164 CNIH4Q9P003 139 aa17.77■□□□□ 0.44
UBXN4-202ENST00000415164 OPTCQ9UBM4 332 aa17.77■□□□□ 0.44
UBXN4-202ENST00000415164 PHF11Q9UIL8 331 aa17.77■□□□□ 0.44
UBXN4-202ENST00000415164 ANGPTL3Q9Y5C1 460 aa17.77■□□□□ 0.44
UBXN4-202ENST00000415164 PRRC2AP48634 2157 aaKnown RBP17.77■□□□□ 0.43
UBXN4-202ENST00000415164 EML6Q6ZMW3 1958 aa17.77■□□□□ 0.43
UBXN4-202ENST00000415164 GLOD5A6NK44 160 aa17.76■□□□□ 0.43
UBXN4-202ENST00000415164 KDM4EB2RXH2 506 aaPredicted RBP17.76■□□□□ 0.43
UBXN4-202ENST00000415164 WISP3O95389 354 aaPredicted RBP17.76■□□□□ 0.43
UBXN4-202ENST00000415164 IGKV3-11P04433 115 aa17.76■□□□□ 0.43
UBXN4-202ENST00000415164 TACR1P25103 407 aa17.76■□□□□ 0.43
UBXN4-202ENST00000415164 BUD31P41223 144 aaPredicted RBP17.76■□□□□ 0.43
UBXN4-202ENST00000415164 ASCL1P50553 236 aa17.76■□□□□ 0.43
UBXN4-202ENST00000415164 TNFRSF17Q02223 184 aa17.76■□□□□ 0.43
UBXN4-202ENST00000415164 TBL3Q12788 808 aaKnown RBP17.76■□□□□ 0.43
UBXN4-202ENST00000415164 DUSP8Q13202 625 aa17.76■□□□□ 0.43
UBXN4-202ENST00000415164 FLYWCH1Q4VC44 716 aa17.76■□□□□ 0.43
UBXN4-202ENST00000415164 TMEM198Q66K66 360 aa17.76■□□□□ 0.43
UBXN4-202ENST00000415164 LYPD8Q6UX82 237 aa17.76■□□□□ 0.43
UBXN4-202ENST00000415164 TMEM64Q6YI46 380 aa17.76■□□□□ 0.43
UBXN4-202ENST00000415164 SEM1Q6ZVN7 128 aa17.76■□□□□ 0.43
UBXN4-202ENST00000415164 SLC15A4Q8N697 577 aa17.76■□□□□ 0.43
UBXN4-202ENST00000415164 NAXEQ8NCW5 288 aa17.76■□□□□ 0.43
UBXN4-202ENST00000415164 C7orf57Q8NEG2 295 aa17.76■□□□□ 0.43
UBXN4-202ENST00000415164 OR7G3Q8NG95 312 aa17.76■□□□□ 0.43
UBXN4-202ENST00000415164 TANKQ92844 425 aa17.76■□□□□ 0.43
UBXN4-202ENST00000415164 ZNF597Q96LX8 424 aa17.76■□□□□ 0.43
UBXN4-202ENST00000415164 MTERF1Q99551 399 aaKnown RBP17.76■□□□□ 0.43
UBXN4-202ENST00000415164 RBBP8Q99708 897 aa17.76■□□□□ 0.43
UBXN4-202ENST00000415164 WWTR1Q9GZV5 400 aa17.76■□□□□ 0.43
UBXN4-202ENST00000415164 GSX1Q9H4S2 264 aaPredicted RBP17.76■□□□□ 0.43
UBXN4-202ENST00000415164 SH2D2AQ9NP31 389 aa17.76■□□□□ 0.43
UBXN4-202ENST00000415164 NUDT4Q9NZJ9 180 aa17.76■□□□□ 0.43
UBXN4-202ENST00000415164 CAMK2AQ9UQM7 478 aa17.76■□□□□ 0.43
UBXN4-202ENST00000415164 FAM221AA4D161 298 aa17.75■□□□□ 0.43
UBXN4-202ENST00000415164 A6NNC1 897 aa17.75■□□□□ 0.43
UBXN4-202ENST00000415164 E7ESA3 106 aa17.75■□□□□ 0.43
UBXN4-202ENST00000415164 UBXN8O00124 270 aa17.75■□□□□ 0.43
UBXN4-202ENST00000415164 PROM1O43490 865 aa17.75■□□□□ 0.43
UBXN4-202ENST00000415164 SCELO95171 688 aa17.75■□□□□ 0.43
UBXN4-202ENST00000415164 FBXO45P0C2W1 286 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms