RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 ACTR8Q9H981 624 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 ROPN1Q9HAT0 212 aaPredicted RBP3.44□□□□□ -1.86
SF3B1-203ENST00000414174 MKKSQ9NPJ1 570 aaPredicted RBP3.44□□□□□ -1.86
SF3B1-203ENST00000414174 HEYLQ9NQ87 328 aaPredicted RBP3.44□□□□□ -1.86
SF3B1-203ENST00000414174 TLR9Q9NR96 1032 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 HAO2Q9NYQ3 351 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 ANKFY1Q9P2R3 1169 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 RHCGQ9UBD6 479 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 SEC14L3Q9UDX4 400 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 PISDQ9UG56 409 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 SMPXQ9UHP9 88 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 SCOCQ9UIL1 159 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 CLEC4EQ9ULY5 219 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 EXOGQ9Y2C4 368 aaKnown RBP3.44□□□□□ -1.86
SF3B1-203ENST00000414174 CA5BQ9Y2D0 317 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 COA3Q9Y2R0 106 aaPredicted RBP3.44□□□□□ -1.86
SF3B1-203ENST00000414174 PRG3Q9Y2Y8 225 aaPredicted RBP3.44□□□□□ -1.86
SF3B1-203ENST00000414174 ZNF337Q9Y3M9 751 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 NEU2Q9Y3R4 380 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 TBL2Q9Y4P3 447 aaKnown RBP3.44□□□□□ -1.86
SF3B1-203ENST00000414174 ASB1Q9Y576 335 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 NPTNQ9Y639 398 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 SLCO1B1Q9Y6L6 691 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 ABCC4O15439 1325 aa3.44□□□□□ -1.86
SF3B1-203ENST00000414174 A0A1B0GW15 77 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 A0A1W2PPC1 479 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 A0A1W2PQL4 384 aaPredicted RBP3.43□□□□□ -1.86
SF3B1-203ENST00000414174 WIPF3A6NGB9 483 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 EFCAB7A8K855 629 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 A8MUI8 341 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 SERPINE3A8MV23 424 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 ZNF487B1APH4 448 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 RNASEK-C17orf49H0YIS7 233 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 PYCARD-AS1I3L0S3 204 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 OGG1O15527 345 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 SLC28A2O43868 658 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 LCMT2O60294 686 aaKnown RBP3.43□□□□□ -1.86
SF3B1-203ENST00000414174 SELENOFO60613 162 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 TOM1O60784 492 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 SHOX2O60902 331 aaPredicted RBP3.43□□□□□ -1.86
SF3B1-203ENST00000414174 ZMPSTE24O75844 475 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 B3GAT3O94766 335 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 IFNGP01579 166 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 IGHV2-70P01814 119 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 MT-ND1P03886 318 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 CRYGBP07316 175 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 RBP1P09455 135 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 FBP1P09467 338 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 NBEAP1P0C6P0 100 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 SMIM6P0DI80 62 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 THRAP10827 490 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 COX7A2P14406 83 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 DAOP14920 347 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 ZNF44P15621 663 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 ZNF12P17014 697 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 KCNA3P22001 575 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 FDXRP22570 491 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 GLRA1P23415 457 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 SLC6A2P23975 617 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 IGFBP5P24593 272 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 DNASE1P24855 282 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 ACKR3P25106 362 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 ITGA3P26006 1051 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 LAP3P28838 519 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 MARCKSP29966 332 aaPredicted RBP3.43□□□□□ -1.86
SF3B1-203ENST00000414174 CSF2RBP32927 897 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 PTPN7P35236 360 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 CHI3L1P36222 383 aaPredicted RBP3.43□□□□□ -1.86
SF3B1-203ENST00000414174 VIPR2P41587 438 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 YAP1P46937 504 aaKnown RBP3.43□□□□□ -1.86
SF3B1-203ENST00000414174 GPR12P47775 334 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 GABRA4P48169 554 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 RFX5P48382 616 aaPredicted RBP3.43□□□□□ -1.86
SF3B1-203ENST00000414174 PXNP49023 591 aaPredicted RBP3.43□□□□□ -1.86
SF3B1-203ENST00000414174 SRP9P49458 86 aaKnown RBP3.43□□□□□ -1.86
SF3B1-203ENST00000414174 NDUFV1P49821 464 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 TMEM33P57088 247 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 POU6F2P78424 691 aaPredicted RBP3.43□□□□□ -1.86
SF3B1-203ENST00000414174 ADARB1P78563 741 aaKnown RBP3.43□□□□□ -1.86
SF3B1-203ENST00000414174 CCL7P80098 99 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 EFNB1P98172 346 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 MGAT3Q09327 533 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 TARDBPQ13148 414 aaKnown RBP eCLIP3.43□□□□□ -1.86
SF3B1-203ENST00000414174 SLC13A2Q13183 592 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 PDCLQ13371 301 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 ITGA9Q13797 1035 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 SLC29A2Q14542 456 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 POU6F1Q14863 301 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 MTF1Q14872 753 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 PTGR1Q14914 329 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 MAPK11Q15759 364 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 ZBTB6Q15916 424 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 CDO1Q16878 200 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 ACCSLQ4AC99 568 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 C5orf47Q569G3 176 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 PIGGQ5H8A4 983 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 KHDC1LQ5JSQ8 128 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 MEDAGQ5VYS4 303 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 OR52E8Q6IFG1 317 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 ZSCAN25Q6NSZ9 544 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms